Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006259 Sechium edule HOM05D007691 ORTHO05D008758 2.1e-42 175.3 86 100.0
Sed0014810 Sechium edule HOM05D007691 ORTHO05D008758 4.8e-23 110.9 87 65.5
CsaV3_3G040570 Cucumis sativus L. HOM05D007691 ORTHO05D008758 3.8e-20 101.3 95 60.0
ClCG10G015920 Citrullus lanatus HOM05D007691 ORTHO05D008758 1.6e-18 95.9 82 64.6
Dinv25036 Davidia involucrata HOM05D007691 ORTHO05D008758 1.1e-14 83.2 82 53.7
Actinidia03917 Actinidia chinensis HOM05D007691 ORTHO05D008758 2.4e-14 82.0 83 55.4
Hma1.2p1_0075F.1_g039350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 3.5e-13 78.2 85 50.6
Gorai.007G253600 Gossypium raimondii HOM05D007691 ORTHO05D008758 5.9e-13 77.4 92 52.2
Gohir.D11G240200 Gossypium hirsutum HOM05D007691 ORTHO05D008758 7.7e-13 77.0 92 52.2
Gohir.A11G227700 Gossypium hirsutum HOM05D007691 ORTHO05D008758 1.7e-12 75.9 92 51.1
vmacro07648 Vaccinium macrocarpon HOM05D007691 ORTHO05D008758 5.0e-12 74.3 81 54.3
Potri.013G066600 Populus trichocarpa HOM05D007691 ORTHO05D008758 8.6e-12 73.6 89 49.4
Manes.08G152200 Manihot esculenta HOM05D007691 ORTHO05D008758 5.5e-11 70.9 86 51.2
Actinidia37824 Actinidia chinensis HOM05D007691 ORTHO05D008758 7.2e-11 70.5 85 48.2
CSS0005044 Camellia sinensis var. sinensis HOM05D007691 ORTHO05D008758 9.5e-11 70.1 85 48.2
Thecc.05G240900 Theobroma cacao HOM05D007691 ORTHO05D008758 3.6e-10 68.2 88 48.9
Ciclev10022756m.g Citrus clementina HOM05D007691 ORTHO05D008758 6.1e-10 67.4 83 49.4
Lalb_Chr14g0364941 Lupinus albus HOM05D007691 ORTHO05D008758 1.8e-09 65.9 86 44.2
Manes.09G136400 Manihot esculenta HOM05D007691 ORTHO05D008758 1.8e-09 65.9 85 48.2
Duzib128G0235 Durio zibethinus HOM05D007691 ORTHO05D008758 2.3e-09 65.5 88 47.7
Prupe.7G016300 Prunus persica HOM05D007691 ORTHO05D008758 2.3e-09 65.5 80 50.0
Eucgr.A02145 Eucalyptus grandis HOM05D007691 ORTHO05D008758 4.0e-09 64.7 91 44.0
Nn6g32394 Nelumbo nucifera HOM05D007691 ORTHO05D008758 5.2e-09 64.3 84 45.2
Sabra13G0058100 Salix brachista HOM05D007691 ORTHO05D008758 6.8e-09 63.9 82 48.8
COL.COLO4_20083 Corchorus olitorius HOM05D007691 ORTHO05D008758 8.9e-09 63.5 91 44.0
Gohir.A08G220400 Gossypium hirsutum HOM05D007691 ORTHO05D008758 1.5e-08 62.8 92 43.5
Sopen03g029460 Solanum pennellii HOM05D018532 ORTHO05D008758 2.0e-08 62.4 89 41.6
Dinv13794 Davidia involucrata HOM05D007691 ORTHO05D008758 2.6e-08 62.0 84 45.2
Phvul.001G106900 Phaseolus vulgaris HOM05D007691 ORTHO05D008758 3.4e-08 61.6 83 49.4
Glyma.03G007400 Glycine max HOM05D007691 ORTHO05D008758 5.7e-08 60.8 88 44.3
Gorai.004G252600 Gossypium raimondii HOM05D007691 ORTHO05D008758 7.5e-08 60.5 83 44.6
Actinidia06207 Actinidia chinensis HOM05D007691 ORTHO05D008758 9.8e-08 60.1 84 46.4
DCAR_013492 Daucus carota HOM05D007691 ORTHO05D008758 9.8e-08 60.1 78 50.0
Cfa017725 Carpinus fangiana HOM05D007691 ORTHO05D008758 1.3e-07 59.7 83 44.6
arahy.Tifrunner.gnm1.ann1.K1K8SL Arachis hypogaea HOM05D007691 ORTHO05D008758 1.7e-07 59.3 92 40.2
Hund15081 Selenicereus undatus HOM05D036338 ORTHO05D008758 1.7e-07 59.3 80 40.0
PGSC0003DMG400010130 Solanum tuberosum HOM05D018532 ORTHO05D008758 1.7e-07 59.3 88 39.8
Nitab4.5_0007090g0010 Nicotiana tabacum HOM05D018532 ORTHO05D008758 2.8e-07 58.5 77 42.9
TAR633G0734 Trochodendron aralioides HOM05D007691 ORTHO05D008758 2.8e-07 58.5 84 42.9
arahy.Tifrunner.gnm1.ann1.F64EX1 Arachis hypogaea HOM05D007691 ORTHO05D008758 3.7e-07 58.2 92 39.1
Duzib128G0872 Durio zibethinus HOM05D014272 ORTHO05D008758 4.9e-07 57.8 88 44.3
arahy.Tifrunner.gnm1.ann1.MY48C3 Arachis hypogaea HOM05D007691 ORTHO05D008758 8.3e-07 57.0 87 40.2
MD14G1010200 Malus domestica HOM05D007691 ORTHO05D008758 8.3e-07 57.0 87 43.7
QL07p017243 Quercus lobata HOM05D007691 ORTHO05D008758 8.3e-07 57.0 91 42.9
Peaxi162Scf00358g00029 Petunia axillaris HOM05D018532 ORTHO05D008758 1.1e-06 56.6 82 39.0
Glyma.19G118700 Glycine max HOM05D007691 ORTHO05D008758 1.4e-06 56.2 84 40.5
Lalb_Chr02g0157501 Lupinus albus HOM05D007691 ORTHO05D008758 3.1e-06 55.1 83 39.8
Lalb_Chr21g0317311 Lupinus albus HOM05D007691 ORTHO05D008758 3.1e-06 55.1 84 46.4
Haze_20399 Corylus avellana HOM05D007691 ORTHO05D008758 4.1e-06 54.7 83 42.2
Lj1g0027070 Lotus japonicus HOM05D007691 ORTHO05D008758 4.1e-06 54.7 91 39.6
Sed0016719 Sechium edule HOM05D007106 ORTHO05D007770 5.4e-06 54.3 83 41.0
arahy.Tifrunner.gnm1.ann1.5EZ2U4 Arachis hypogaea HOM05D007691 ORTHO05D008758 7.0e-06 53.9 99 39.4
FAN08G1525 Fragaria x ananassa HOM05D007106 ORTHO05D007770 7.0e-06 53.9 86 39.5
MD12G1012400 Malus domestica HOM05D007691 ORTHO05D008758 7.0e-06 53.9 82 41.5


User provided reference genes

Program Settings