Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006099 Sechium edule HOM05D005842 ORTHO05D007077 1.7e-45 185.7 93 100.0
CsaV3_2G012270 Cucumis sativus L. HOM05D005842 ORTHO05D007077 1.2e-19 99.8 94 59.6
MELO3C023065.2 Cucumis melo HOM05D005842 ORTHO05D007077 2.0e-14 82.4 82 56.1
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 2.4e-12 75.5 87 51.7
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 2.4e-12 75.5 87 51.7
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 2.4e-12 75.5 88 46.6
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 7.1e-12 73.9 91 48.4
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 9.3e-12 73.6 87 50.6
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 1.2e-11 73.2 88 44.3
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 2.1e-11 72.4 87 44.8
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 2.7e-11 72.0 87 46.0
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 4.6e-11 71.2 87 48.3
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 4.6e-11 71.2 87 49.4
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 6.0e-11 70.9 87 48.3
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 7.8e-11 70.5 87 44.8
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 7.8e-11 70.5 84 50.0
ClCG06G007420 Citrullus lanatus HOM05D005842 ORTHO05D007077 1.3e-10 69.7 59 61.0
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 2.3e-10 68.9 87 44.8
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 3.9e-10 68.2 87 49.4
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 5.1e-10 67.8 87 44.8
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 6.6e-10 67.4 84 47.6
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 8.7e-10 67.0 87 44.8
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 3.3e-09 65.1 82 43.9
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 5.6e-09 64.3 84 45.2
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 9.6e-09 63.5 83 45.8
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 1.6e-08 62.8 87 41.4
Nn1g03039 Nelumbo nucifera HOM05D005842 ORTHO05D007077 2.1e-08 62.4 84 42.9
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 3.6e-08 61.6 84 42.9
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.4e-07 59.7 84 41.7
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 1.8e-07 59.3 84 44.0
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.8e-07 59.3 86 43.0
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 2.4e-07 58.9 84 42.9
PSO384G4311 Papaver somniferum HOM05D005842 ORTHO05D007077 2.4e-07 58.9 85 40.0
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 4.0e-07 58.2 75 42.7
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 9.0e-07 57.0 82 40.2
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 9.0e-07 57.0 82 40.2
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 9.0e-07 57.0 87 40.2
Sed0010218 Sechium edule HOM05D005842 ORTHO05D007077 9.0e-07 57.0 83 39.8
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 9.0e-07 57.0 93 38.7
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 1.2e-06 56.6 71 46.5
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 1.2e-06 56.6 83 47.0
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 1.5e-06 56.2 82 40.2
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 2.0e-06 55.8 84 41.7
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 2.0e-06 55.8 84 41.7
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 2.0e-06 55.8 84 41.7
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 2.0e-06 55.8 84 41.7
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 2.0e-06 55.8 84 41.7
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 2.0e-06 55.8 84 41.7
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 2.0e-06 55.8 84 41.7
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 2.0e-06 55.8 84 41.7
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 3.4e-06 55.1 87 41.4
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 3.4e-06 55.1 90 40.0
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 4.4e-06 54.7 84 39.3
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 4.4e-06 54.7 78 39.7
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 9.9e-06 53.5 105 35.2


User provided reference genes

Program Settings