Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 2.6e-224 781.9 450 100.0
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 6.7e-140 501.5 495 60.0
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 3.5e-133 479.2 494 61.5
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 4.9e-127 458.8 475 62.3
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 5.7e-91 339.0 218 78.0
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 1.7e-90 337.4 222 74.3
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 8.3e-90 335.1 222 73.4
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 2.0e-88 330.5 225 72.0
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 2.7e-88 330.1 222 73.4
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 5.9e-88 328.9 225 72.9
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 2.2e-87 327.0 222 73.4
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 2.9e-87 326.6 215 77.7
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 1.1e-86 324.7 220 73.6
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 1.5e-86 324.3 332 56.9
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 1.5e-86 324.3 222 73.0
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 2.5e-86 323.6 222 73.0
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 4.2e-86 322.8 221 72.4
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 5.5e-86 322.4 238 70.2
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 5.5e-86 322.4 224 71.9
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 7.2e-86 322.0 227 70.5
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 9.4e-86 321.6 222 73.0
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 1.6e-85 320.9 301 59.5
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 2.1e-85 320.5 222 71.2
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 6.1e-85 318.9 219 73.5
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 1.8e-84 317.4 220 72.3
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 2.3e-84 317.0 297 61.6
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 3.0e-84 316.6 219 72.1
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 4.0e-84 316.2 222 72.5
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 8.8e-84 315.1 219 72.1
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 1.5e-83 314.3 221 70.6
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 2.6e-83 313.5 220 72.3
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 2.6e-83 313.5 223 72.2
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 2.6e-83 313.5 318 54.7
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 3.4e-83 313.2 222 70.7
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 4.4e-83 312.8 221 70.1
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 5.7e-83 312.4 220 69.5
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 5.7e-83 312.4 222 72.5
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 7.5e-83 312.0 224 72.3
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 1.3e-82 311.2 222 70.3
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 1.7e-82 310.8 224 67.0
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 1.7e-82 310.8 222 69.8
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 2.2e-82 310.5 219 69.9
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 3.7e-82 309.7 219 68.9
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 3.7e-82 309.7 329 54.1
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 6.3e-82 308.9 218 68.8
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 6.3e-82 308.9 456 50.9
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 6.3e-82 308.9 456 50.9
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 8.3e-82 308.5 223 68.2
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 1.4e-81 307.8 331 55.0
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 1.8e-81 307.4 222 71.2
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 2.4e-81 307.0 267 65.9
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 3.1e-81 306.6 256 61.3
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 5.4e-81 305.8 221 69.2
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 5.4e-81 305.8 320 58.8
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 7.0e-81 305.4 318 54.4
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 9.1e-81 305.1 222 65.8
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 1.6e-80 304.3 215 68.8
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 1.6e-80 304.3 221 68.3
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 3.5e-80 303.1 324 58.6
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 5.9e-80 302.4 320 57.8
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 7.7e-80 302.0 223 66.8
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 7.7e-80 302.0 384 51.0
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 1.0e-79 301.6 217 70.5
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 1.7e-79 300.8 325 53.8
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 2.3e-79 300.4 220 68.2
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 2.9e-79 300.1 323 53.3
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 6.6e-79 298.9 329 56.5
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 6.6e-79 298.9 265 61.5
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 8.6e-79 298.5 222 66.7
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 1.5e-78 297.7 380 51.1
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 1.5e-78 297.7 286 57.3
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 1.5e-78 297.7 215 66.0
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 2.5e-78 297.0 480 44.8
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 5.5e-78 295.8 356 54.2
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 9.5e-78 295.0 215 68.4
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 1.2e-77 294.7 290 57.9
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 1.2e-77 294.7 222 66.7
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 1.6e-77 294.3 380 51.1
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 4.7e-77 292.7 378 50.0
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 4.7e-77 292.7 219 68.0
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 8.0e-77 292.0 356 51.4
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 1.4e-76 291.2 356 52.0
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 2.3e-76 290.4 378 50.3
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 8.9e-76 288.5 237 62.0
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 2.6e-75 287.0 220 64.5
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.3e-74 284.6 379 50.7
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 4.9e-74 282.7 378 51.1
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 2.3e-71 273.9 286 54.2
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 1.8e-68 264.2 357 48.7
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 6.8e-68 262.3 313 52.4
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 8.3e-66 255.4 226 57.1
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 1.4e-65 254.6 238 55.5
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 5.2e-60 236.1 211 61.6
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 6.4e-58 229.2 166 66.3
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 1.9e-57 227.6 159 71.1
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 1.9e-57 227.6 159 71.1
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 3.5e-56 223.4 223 55.2
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 8.6e-55 218.8 143 73.4
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 1.1e-54 218.4 159 67.3
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 1.1e-52 211.8 156 64.7
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 1.4e-36 158.3 159 54.7
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 3.4e-27 127.1 191 39.8
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 9.9e-27 125.6 69 81.2
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 4.5e-19 100.1 60 78.3
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 7.6e-19 99.4 92 59.8
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 1.7e-18 98.2 368 34.0
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 3.8e-18 97.1 161 46.0
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.9e-17 94.7 161 45.3
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 4.6e-16 90.1 161 44.7
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 1.3e-13 82.0 57 68.4
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 2.8e-13 80.9 42 90.5
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 8.2e-13 79.3 218 39.4
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 1.8e-12 78.2 96 53.1
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 1.5e-11 75.1 49 69.4
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 1.5e-11 75.1 49 69.4
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 6.7e-07 59.7 36 75.0


User provided reference genes

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