Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 2.0e-163 579.3 359 100.0
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 6.0e-43 179.1 352 40.3
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 5.1e-26 122.9 357 34.7
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 9.7e-25 118.6 342 33.3
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 1.3e-24 118.2 354 32.5
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 1.7e-24 117.9 342 32.7
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 5.3e-23 112.8 352 32.7
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 6.9e-23 112.5 346 32.9
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 6.9e-23 112.5 339 33.0
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 9.1e-23 112.1 351 31.1
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 4.5e-22 109.8 354 31.6
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 7.7e-22 109.0 352 33.0
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 1.7e-21 107.8 350 30.9
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 2.9e-21 107.1 126 52.4
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 6.5e-21 105.9 344 29.4
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 8.5e-21 105.5 363 30.9
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 1.4e-20 104.8 118 55.1
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 2.5e-20 104.0 146 45.2
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 3.2e-20 103.6 351 31.3
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 4.2e-20 103.2 116 52.6
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 4.2e-20 103.2 349 30.4
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 4.2e-20 103.2 357 29.7
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 5.5e-20 102.8 119 51.3
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 7.2e-20 102.4 119 51.3
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 9.4e-20 102.1 130 50.0
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.6e-19 101.3 133 51.9
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 2.1e-19 100.9 139 47.5
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.7e-19 100.5 348 31.0
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 2.7e-19 100.5 362 30.4
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 3.6e-19 100.1 120 50.8
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.0e-18 98.6 137 45.3
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.4e-18 98.2 119 50.4
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 5.1e-18 96.3 130 46.2
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 6.7e-18 95.9 362 29.8
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.5e-17 94.7 138 44.2
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 2.0e-17 94.4 142 42.3
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 4.4e-17 93.2 349 28.7
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 4.4e-17 93.2 119 47.9
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 4.4e-17 93.2 369 29.3
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 9.7e-17 92.0 108 48.1
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 1.3e-16 91.7 355 30.4
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 1.3e-16 91.7 348 33.6
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.3e-16 91.7 348 33.6
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.7e-16 91.3 125 42.4
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 3.7e-16 90.1 132 47.0
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.7e-16 90.1 348 28.4
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 6.3e-16 89.4 124 48.4
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 6.3e-16 89.4 143 40.6
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 1.1e-15 88.6 116 46.6
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 1.1e-15 88.6 348 29.0
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 1.4e-15 88.2 364 29.1
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.4e-15 88.2 340 29.4
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 1.4e-15 88.2 119 42.9
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 1.4e-15 88.2 342 30.1
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 1.4e-15 88.2 346 28.6
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 1.8e-15 87.8 351 29.1
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 2.4e-15 87.4 131 45.0
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 2.4e-15 87.4 357 27.7
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 3.1e-15 87.0 122 43.4
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 5.3e-15 86.3 348 29.3
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 7.0e-15 85.9 136 46.3
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 9.1e-15 85.5 347 29.4
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 9.1e-15 85.5 119 47.1
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 1.2e-14 85.1 355 30.4
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 1.5e-14 84.7 119 42.0
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 4.5e-14 83.2 131 38.2
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 4.5e-14 83.2 362 27.6
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 4.5e-14 83.2 121 46.3
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 5.9e-14 82.8 115 46.1
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 7.7e-14 82.4 355 30.4
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 1.0e-13 82.0 381 27.0
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.0e-13 82.0 127 41.7
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 1.7e-13 81.3 346 28.0
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 5.0e-13 79.7 343 26.8
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 1.5e-12 78.2 122 44.3
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 1.9e-12 77.8 329 27.1
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 2.5e-12 77.4 365 26.6
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 3.2e-12 77.0 140 39.3
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 4.2e-12 76.6 345 27.5
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 5.5e-12 76.3 122 44.3
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.2e-11 75.1 128 43.0
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 1.6e-11 74.7 132 40.2
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 1.6e-11 74.7 126 40.5
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.6e-11 74.7 127 39.4
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 2.7e-11 73.9 133 41.4
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 4.7e-11 73.2 351 27.9
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 6.1e-11 72.8 118 41.5
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 1.0e-10 72.0 141 36.9
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 2.3e-10 70.9 127 38.6
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 3.9e-10 70.1 119 41.2
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.9e-10 70.1 121 44.6
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 3.9e-10 70.1 121 44.6
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 6.7e-10 69.3 117 40.2
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 8.8e-10 68.9 138 39.9
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 1.1e-09 68.6 357 27.7
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 1.5e-09 68.2 129 38.0
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 5.7e-09 66.2 128 36.7
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 1.3e-08 65.1 351 24.5
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.2e-08 64.3 132 37.9
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.2e-08 64.3 132 37.9
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 2.2e-08 64.3 130 33.1
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 3.7e-08 63.5 139 33.8
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 1.1e-07 62.0 102 36.3
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 1.4e-07 61.6 134 38.1
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.8e-07 61.2 345 27.5
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 2.4e-07 60.8 130 33.8
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 3.5e-06 57.0 133 36.1
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 3.5e-06 57.0 110 39.1
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 3.5e-06 57.0 81 42.0
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 4.5e-06 56.6 136 34.6


User provided reference genes

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