Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006019 Sechium edule HOM05D007943 ORTHO05D010047 2.8e-61 238.4 119 100.0
CsaV3_3G007690 Cucumis sativus L. HOM05D007943 ORTHO05D010047 2.0e-35 152.5 126 69.0
MELO3C005988.2 Cucumis melo HOM05D007943 ORTHO05D010047 7.6e-35 150.6 126 68.3
ClCG05G000500 Citrullus lanatus HOM05D007943 ORTHO05D010047 3.2e-17 92.0 205 36.1
CsaV3_3G007710 Cucumis sativus L. HOM05D007943 ORTHO05D010047 4.8e-13 78.2 99 44.4
Sed0008180 Sechium edule HOM05D007943 ORTHO05D010047 1.4e-12 76.6 105 44.8
QL08p046777 Quercus lobata HOM05D007943 ORTHO05D010047 3.1e-12 75.5 77 48.1
Haze_15717 Corylus avellana HOM05D007943 ORTHO05D010047 5.3e-12 74.7 76 48.7
Cfa003750 Carpinus fangiana HOM05D007943 ORTHO05D010047 3.8e-10 68.6 76 48.7
CiPaw.01G081100 Carya illinoinensis HOM05D007943 ORTHO05D010047 3.8e-10 68.6 77 42.9
Gohir.D07G139100 Gossypium hirsutum HOM05D007943 ORTHO05D010047 8.5e-10 67.4 103 35.9
Gorai.001G151200 Gossypium raimondii HOM05D007943 ORTHO05D010047 8.5e-10 67.4 103 35.9
Glyma.07G051200 Glycine max HOM05D007943 ORTHO05D010047 1.1e-09 67.0 86 37.2
Gohir.A07G134500 Gossypium hirsutum HOM05D007943 ORTHO05D010047 4.2e-09 65.1 101 34.7
Atru.chr5.749 Acer truncatum HOM05D007943 ORTHO05D010047 9.4e-09 63.9 81 37.0
Prupe.2G195800 Prunus persica HOM05D007943 ORTHO05D010047 9.4e-09 63.9 90 43.3
FAN01G2944 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.6e-08 63.2 103 33.0
FAN10G1708 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.6e-08 63.2 103 33.0
FvH4_7g17420 Fragaria vesca HOM05D007943 ORTHO05D010047 2.1e-08 62.8 103 33.0
FAN06G1823 Fragaria x ananassa HOM05D007943 ORTHO05D010047 2.1e-08 62.8 103 33.0
RcHm_v2.0_Chr1g0360861 Rosa chinensis HOM05D007943 ORTHO05D010047 2.1e-08 62.8 102 33.3
Gohir.D11G104700 Gossypium hirsutum HOM05D007943 ORTHO05D010047 3.6e-08 62.0 77 41.6
Gorai.007G112000 Gossypium raimondii HOM05D007943 ORTHO05D010047 3.6e-08 62.0 77 41.6
TPR.G25267 Trifolium pratense HOM05D007943 ORTHO05D010047 3.6e-08 62.0 83 41.0
FAN10G0207 Fragaria x ananassa HOM05D007943 ORTHO05D010047 4.7e-08 61.6 103 32.0
Glyma.16G020300 Glycine max HOM05D007943 ORTHO05D010047 4.7e-08 61.6 67 41.8
Manes.05G017800 Manihot esculenta HOM05D007943 ORTHO05D010047 4.7e-08 61.6 93 39.8
MD01G1087200 Malus domestica HOM05D007943 ORTHO05D010047 6.1e-08 61.2 56 48.2
Medtr8g024630 Medicago truncatula HOM05D007943 ORTHO05D010047 7.9e-08 60.8 86 38.4
GSVIVG01027420001 Vitis vinifera HOM05D007943 ORTHO05D010047 7.9e-08 60.8 65 46.2
FAN03G2903 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.0e-07 60.5 103 32.0
Gohir.A11G100000 Gossypium hirsutum HOM05D007943 ORTHO05D010047 1.4e-07 60.1 77 41.6
MD07G1157400 Malus domestica HOM05D007943 ORTHO05D010047 1.4e-07 60.1 59 49.2
Psat4g217240 Pisum sativum HOM05D007943 ORTHO05D010047 1.8e-07 59.7 86 37.2
Duzib133G1419 Durio zibethinus HOM05D007943 ORTHO05D010047 2.3e-07 59.3 83 39.8
Thecc.01G335100 Theobroma cacao HOM05D007943 ORTHO05D010047 3.9e-07 58.5 56 44.6
Oeu042966.1 Olea europaea HOM05D007943 ORTHO05D010047 5.1e-07 58.2 56 55.4
TAR629G3284 Trochodendron aralioides HOM05D007943 ORTHO05D010047 8.8e-07 57.4 74 41.9
Manes.01G241300 Manihot esculenta HOM05D007943 ORTHO05D010047 1.1e-06 57.0 67 38.8
arahy.Tifrunner.gnm1.ann1.FJCJ23 Arachis hypogaea HOM05D007943 ORTHO05D010047 2.0e-06 56.2 83 34.9
Solyc10g009260.1 Solanum lycopersicum HOM05D007943 ORTHO05D010047 2.0e-06 56.2 46 47.8
Sabra02G0135900 Salix brachista HOM05D007943 ORTHO05D010047 2.6e-06 55.8 90 38.9
TPR.G4732 Trifolium pratense HOM05D007943 ORTHO05D010047 2.6e-06 55.8 82 34.1
Phvul.010G118200 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 4.4e-06 55.1 69 40.6
Potri.014G104100 Populus trichocarpa HOM05D007943 ORTHO05D010047 4.4e-06 55.1 77 36.4
Lalb_Chr10g0100821 Lupinus albus HOM05D007943 ORTHO05D010047 5.7e-06 54.7 75 36.0


User provided reference genes

Program Settings