Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006013 Sechium edule HOM05D005304 ORTHO05D004438 1.8e-72 275.8 136 100.0
ClCG05G021460 Citrullus lanatus HOM05D005304 ORTHO05D004438 4.3e-42 174.9 125 74.4
CsaV3_5G035790 Cucumis sativus L. HOM05D005304 ORTHO05D004438 4.0e-40 168.3 132 68.9
MELO3C012381.2 Cucumis melo HOM05D005304 ORTHO05D004438 2.0e-39 166.0 131 68.7
Sed0009329 Sechium edule HOM05D005304 ORTHO05D004438 2.1e-36 156.0 136 64.0
CiPaw.01G264700 Carya illinoinensis HOM05D005304 ORTHO05D004438 9.4e-13 77.4 72 50.0
Manes.10G053300 Manihot esculenta HOM05D005304 ORTHO05D004438 1.0e-11 73.9 121 41.3
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 3.0e-11 72.4 71 53.5
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 6.7e-11 71.2 106 39.6
TWI63G0695 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 6.7e-11 71.2 113 40.7
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 8.8e-11 70.9 108 41.7
Nn2g13894 Nelumbo nucifera HOM05D005304 ORTHO05D004438 1.1e-10 70.5 125 35.2
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 1.1e-10 70.5 120 39.2
FAN12G4274 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.0e-10 69.7 108 41.7
Manes.07G093500 Manihot esculenta HOM05D005304 ORTHO05D004438 2.0e-10 69.7 118 41.5
FAN02G4580 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.6e-10 69.3 108 41.7
FvH4_7g06790 Fragaria vesca HOM05D005304 ORTHO05D004438 3.3e-10 68.9 107 41.1
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 3.3e-10 68.9 104 41.3
FAN06G1004 Fragaria x ananassa HOM05D005304 ORTHO05D004438 3.3e-10 68.9 107 41.1
FAN10G3090 Fragaria x ananassa HOM05D005304 ORTHO05D004438 3.3e-10 68.9 107 41.1
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 4.4e-10 68.6 71 47.9
Manes.10G053200 Manihot esculenta HOM05D005304 ORTHO05D004438 5.7e-10 68.2 122 38.5
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 7.4e-10 67.8 109 42.2
Haze_16785 Corylus avellana HOM05D005304 ORTHO05D004438 7.4e-10 67.8 89 40.4
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 7.4e-10 67.8 106 42.5
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 7.4e-10 67.8 110 42.7
CsaV3_2G032750 Cucumis sativus L. HOM05D005304 ORTHO05D004438 9.7e-10 67.4 122 37.7
TAR369G0323 Trochodendron aralioides HOM05D001401 ORTHO05D002222 1.3e-09 67.0 108 40.7
Cfa001771 Carpinus fangiana HOM05D005304 ORTHO05D004438 1.7e-09 66.6 72 47.2
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 2.2e-09 66.2 122 36.9
Oeu032435.1 Olea europaea HOM05D005304 ORTHO05D004438 2.8e-09 65.9 100 42.0
TWI38G0392 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 2.8e-09 65.9 112 33.9
CiPaw.02G169800 Carya illinoinensis HOM05D005304 ORTHO05D004438 3.7e-09 65.5 72 47.2
Duzib114G0655 Durio zibethinus HOM05D005304 ORTHO05D004438 3.7e-09 65.5 107 41.1
Duzib128G0830 Durio zibethinus HOM05D005304 ORTHO05D004438 3.7e-09 65.5 111 42.3
Rhsim03G0110900 Rhododendron simsii HOM05D005304 ORTHO05D004438 3.7e-09 65.5 104 41.3
Thecc.10G090600 Theobroma cacao HOM05D005304 ORTHO05D004438 3.7e-09 65.5 112 38.4
FAN01G2164 Fragaria x ananassa HOM05D005304 ORTHO05D004438 4.8e-09 65.1 104 40.4
Sabra10G0179600 Salix brachista HOM05D005304 ORTHO05D004438 4.8e-09 65.1 108 38.9
QL03p011649 Quercus lobata HOM05D005304 ORTHO05D004438 6.3e-09 64.7 88 40.9
QL03p021677 Quercus lobata HOM05D005304 ORTHO05D004438 8.2e-09 64.3 88 40.9
Duzib128G0918 Durio zibethinus HOM05D005304 ORTHO05D004438 1.4e-08 63.5 111 41.4
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 1.4e-08 63.5 112 39.3
Lsat_1_v5_gn_9_70641 Lactuca sativa HOM05D005304 ORTHO05D004438 1.8e-08 63.2 131 35.1
PGR044G1405 Punica granatum HOM05D005304 ORTHO05D004438 1.8e-08 63.2 99 40.4
RcHm_v2.0_Chr1g0336411 Rosa chinensis HOM05D005304 ORTHO05D004438 1.8e-08 63.2 101 38.6
Cc02_g10500 Coffea canephora HOM05D005304 ORTHO05D004438 2.4e-08 62.8 107 40.2
Lsat_1_v5_gn_8_22700 Lactuca sativa HOM05D005304 ORTHO05D004438 2.4e-08 62.8 126 34.1
Oeu059829.1 Olea europaea HOM05D005304 ORTHO05D004438 2.4e-08 62.8 109 34.9
ClCG08G007940 Citrullus lanatus HOM05D005304 ORTHO05D004438 3.1e-08 62.4 109 37.6
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 5.3e-08 61.6 124 34.7
COL.COLO4_32872 Corchorus olitorius HOM05D005304 ORTHO05D004438 1.5e-07 60.1 119 37.0
Prupe.2G095100 Prunus persica HOM05D005304 ORTHO05D004438 1.5e-07 60.1 64 48.4
TAR636G3524 Trochodendron aralioides HOM05D005304 ORTHO05D004438 1.5e-07 60.1 125 32.8
Gohir.A01G128800 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.0e-07 59.7 98 36.7
SalBow4G2705 Salvia bowleyana HOM05D005304 ORTHO05D004438 2.0e-07 59.7 56 55.4
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 4.5e-07 58.5 53 60.4
Gohir.D04G021300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 5.9e-07 58.2 73 43.8
Gorai.012G025400 Gossypium raimondii HOM05D005304 ORTHO05D004438 5.9e-07 58.2 73 43.8
Atru.chr12.921 Acer truncatum HOM05D005304 ORTHO05D004438 7.7e-07 57.8 127 35.4
Gohir.D01G118400 Gossypium hirsutum HOM05D005304 ORTHO05D004438 7.7e-07 57.8 98 36.7
Gorai.002G144400 Gossypium raimondii HOM05D005304 ORTHO05D004438 7.7e-07 57.8 98 36.7
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 7.7e-07 57.8 79 39.2
Gohir.A05G393600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.0e-06 57.4 73 43.8
CiPaw.13G144100 Carya illinoinensis HOM05D005304 ORTHO05D004438 2.2e-06 56.2 76 40.8
Potri.010G231700 Populus trichocarpa HOM05D005304 ORTHO05D004438 2.2e-06 56.2 87 42.5
MSTRG.27507 Avicennia marina HOM05D005304 ORTHO05D004438 2.9e-06 55.8 73 47.9
CANSAT56G0274 Cannabis sativa HOM05D005304 ORTHO05D004438 3.8e-06 55.5 55 50.9
Aqoxy2G01602 Aquilegia oxysepala HOM05D005304 ORTHO05D004438 6.5e-06 54.7 65 43.1
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 6.5e-06 54.7 68 41.2
PGR044G0041 Punica granatum HOM05D005304 ORTHO05D004438 6.5e-06 54.7 56 53.6
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 8.5e-06 54.3 84 38.1
Migut.F01894 Erythranthe guttata HOM05D005304 ORTHO05D004438 8.5e-06 54.3 53 54.7
Lalb_Chr02g0151151 Lupinus albus HOM05D005304 ORTHO05D004438 8.5e-06 54.3 57 43.9
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 8.5e-06 54.3 73 43.8


User provided reference genes

Program Settings