Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 2.5e-116 422.2 219 100.0
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 5.2e-106 387.9 219 90.0
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 4.4e-97 358.2 219 83.6
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 2.2e-96 355.9 219 83.1
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 6.4e-96 354.4 195 92.8
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 8.4e-96 354.0 219 84.0
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 2.4e-95 352.4 218 82.6
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 4.1e-95 351.7 218 82.1
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 5.4e-95 351.3 219 81.7
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 7.1e-95 350.9 219 81.3
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 9.2e-95 350.5 216 83.3
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 1.2e-94 350.1 213 83.1
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 4.6e-94 348.2 211 84.8
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 6.0e-94 347.8 219 83.1
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 6.0e-94 347.8 219 81.7
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 7.8e-94 347.4 218 81.7
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.3e-93 346.7 213 82.2
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 1.3e-93 346.7 216 81.5
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.7e-93 346.3 219 79.9
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 1.7e-93 346.3 219 81.3
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 5.1e-93 344.7 219 82.2
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 6.6e-93 344.4 219 82.6
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 3.3e-92 342.0 219 80.8
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 4.3e-92 341.7 216 81.5
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 4.3e-92 341.7 219 80.8
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 4.3e-92 341.7 219 80.8
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 5.6e-92 341.3 220 78.2
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 7.3e-92 340.9 219 77.6
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 9.6e-92 340.5 247 72.9
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 9.6e-92 340.5 247 72.9
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.2e-91 340.1 219 80.4
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 1.6e-91 339.7 218 78.4
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 1.6e-91 339.7 220 78.6
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 2.1e-91 339.3 218 80.3
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 2.8e-91 339.0 218 78.9
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 2.8e-91 339.0 207 83.6
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 4.7e-91 338.2 217 78.3
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 4.7e-91 338.2 215 80.9
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 8.1e-91 337.4 207 81.2
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 1.4e-90 336.7 215 80.0
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 1.4e-90 336.7 219 77.2
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 1.8e-90 336.3 215 79.5
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 2.4e-90 335.9 218 78.0
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.4e-90 335.9 208 81.2
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 6.8e-90 334.3 207 82.6
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 8.9e-90 334.0 217 77.9
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 8.9e-90 334.0 215 79.5
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 8.9e-90 334.0 215 79.5
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 1.2e-89 333.6 208 82.7
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 1.2e-89 333.6 218 77.1
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 1.5e-89 333.2 214 79.4
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 2.6e-89 332.4 218 78.4
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 3.4e-89 332.0 211 82.5
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 4.4e-89 331.6 208 80.3
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 5.8e-89 331.3 218 76.1
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 7.6e-89 330.9 218 79.4
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 7.6e-89 330.9 215 78.6
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.3e-88 330.1 208 79.3
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 1.7e-88 329.7 218 79.4
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 2.2e-88 329.3 218 75.7
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 2.2e-88 329.3 218 75.7
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 8.4e-88 327.4 219 78.1
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 8.4e-88 327.4 219 78.1
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.1e-87 327.0 210 80.0
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 1.9e-87 326.2 207 79.7
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 2.4e-87 325.9 208 78.8
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 3.2e-87 325.5 207 79.2
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 2.7e-86 322.4 215 76.3
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 3.5e-86 322.0 194 83.0
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.0e-85 320.5 204 78.4
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 1.3e-85 320.1 217 76.5
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 1.7e-85 319.7 241 71.0
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 2.3e-85 319.3 210 77.6
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 2.3e-85 319.3 234 72.2
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 5.1e-85 318.2 208 76.4
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 6.6e-85 317.8 219 79.5
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 2.5e-84 315.8 200 81.0
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 2.5e-84 315.8 208 76.4
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 7.3e-84 314.3 207 76.3
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 4.8e-83 311.6 200 79.0
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 8.1e-83 310.8 219 77.2
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.4e-82 310.1 219 75.3
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 1.4e-82 310.1 206 76.7
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 2.4e-82 309.3 219 75.8
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 4.0e-82 308.5 193 80.3
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 4.0e-82 308.5 196 80.1
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.1e-79 300.4 193 78.8
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 3.3e-76 288.9 206 70.4
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 7.4e-76 287.7 196 76.5
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 1.4e-74 283.5 207 69.1
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 2.4e-74 282.7 183 76.5
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 7.6e-73 277.7 216 71.3
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 2.2e-72 276.2 224 64.7
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 2.4e-71 272.7 207 67.6
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.1e-70 269.6 170 82.9
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 4.6e-70 268.5 207 66.7
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 2.5e-68 262.7 173 79.8
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 6.9e-66 254.6 230 63.5
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 1.3e-64 250.4 173 75.1
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 1.9e-63 246.5 202 68.8
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 4.2e-63 245.4 154 85.1
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 5.5e-63 245.0 208 64.4
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 1.2e-57 227.3 144 79.2
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 2.2e-56 223.0 143 83.2
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 2.5e-52 209.5 138 81.9
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.4e-50 203.8 183 62.8
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 2.0e-44 183.3 218 53.2
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 1.4e-42 177.2 137 67.9
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 5.3e-42 175.3 120 76.7
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 6.9e-42 174.9 113 77.9
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.5e-36 157.1 96 78.1
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 4.8e-35 152.1 115 70.4
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 9.1e-34 147.9 108 73.1
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 1.8e-29 133.7 204 36.3
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 2.3e-29 133.3 212 39.2
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 1.3e-27 127.5 196 36.7
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 7.2e-23 111.7 81 75.3
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 1.8e-21 107.1 101 61.4
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 3.0e-21 106.3 101 60.4
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 3.7e-19 99.4 116 51.7
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 3.1e-18 96.3 88 50.0
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.0e-16 91.3 51 80.4


User provided reference genes

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