Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 3.3e-136 488.4 253 100.0
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 7.1e-99 364.4 256 74.6
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 9.3e-99 364.0 244 75.0
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 6.0e-98 361.3 261 71.6
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 6.7e-89 331.3 248 69.8
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 1.1e-72 277.3 225 64.9
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 1.4e-70 270.4 249 59.0
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 4.1e-70 268.9 244 59.0
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 7.7e-69 264.6 220 62.7
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 7.7e-69 264.6 220 62.7
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 1.0e-68 264.2 247 59.5
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 2.9e-68 262.7 218 62.4
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 5.0e-68 261.9 222 61.3
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 4.7e-66 255.4 226 59.3
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.4e-65 253.8 253 54.2
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 1.4e-65 253.8 253 54.2
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 5.2e-65 251.9 223 57.8
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 1.5e-64 250.4 224 58.9
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 2.6e-64 249.6 223 57.0
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 5.7e-64 248.4 246 55.7
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 7.5e-64 248.1 227 57.3
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.3e-63 247.3 250 53.6
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 1.7e-63 246.9 252 53.6
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 4.8e-63 245.4 259 55.2
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 4.8e-63 245.4 230 57.4
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.4e-62 243.8 225 57.3
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 1.8e-62 243.4 247 53.0
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 3.1e-62 242.7 255 54.1
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 5.3e-62 241.9 246 54.5
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 2.7e-61 239.6 237 54.9
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 4.5e-61 238.8 226 54.9
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 1.0e-60 237.7 237 54.9
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 2.2e-60 236.5 234 53.0
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 8.5e-60 234.6 256 52.3
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 8.5e-60 234.6 229 56.8
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 1.6e-58 230.3 255 52.9
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 2.7e-58 229.6 261 49.0
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 2.7e-58 229.6 248 50.8
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 4.7e-58 228.8 261 53.3
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 8.0e-58 228.0 178 65.2
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 8.8e-57 224.6 250 54.0
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 1.6e-53 213.8 244 49.2
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 2.0e-53 213.4 210 53.8
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 7.7e-53 211.5 209 55.0
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 1.0e-52 211.1 243 51.0
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 1.7e-52 210.3 223 50.2
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 2.9e-52 209.5 209 54.5
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 3.8e-52 209.1 226 52.2
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 1.1e-51 207.6 247 48.2
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 1.1e-51 207.6 224 50.9
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.9e-51 206.8 243 47.3
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.9e-51 206.8 243 47.3
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.9e-51 206.8 243 47.3
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 4.2e-51 205.7 250 46.8
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 5.5e-51 205.3 218 53.7
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 7.2e-51 204.9 226 51.3
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 7.2e-51 204.9 248 45.6
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 7.2e-51 204.9 250 46.8
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 9.5e-51 204.5 241 48.1
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 8.0e-50 201.4 224 49.6
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 8.0e-50 201.4 224 49.6
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 8.0e-50 201.4 190 55.3
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 1.0e-49 201.1 180 56.1
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 2.3e-49 199.9 228 47.8
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 4.0e-49 199.1 212 51.9
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 1.5e-48 197.2 159 59.7
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 9.8e-48 194.5 218 47.7
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 9.8e-48 194.5 245 45.3
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 2.2e-47 193.4 248 44.0
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 6.3e-47 191.8 154 59.7
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 1.1e-46 191.0 221 47.1
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 7.0e-46 188.3 212 48.1
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 1.2e-45 187.6 205 49.3
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 4.5e-45 185.7 212 47.6
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 2.3e-44 183.3 222 46.4
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 3.3e-43 179.5 224 46.0
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 4.7e-42 175.6 225 47.6
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 1.0e-41 174.5 171 54.4
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 3.0e-41 172.9 163 52.1
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 3.7e-39 166.0 228 44.7
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.4e-38 164.1 132 60.6
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 2.4e-38 163.3 207 44.9
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 6.0e-37 158.7 250 40.8
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 7.8e-37 158.3 270 38.5
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 1.7e-36 157.1 141 56.0
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 6.6e-36 155.2 273 37.4
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 8.6e-36 154.8 142 54.9
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 2.5e-35 153.3 150 52.7
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 3.1e-33 146.4 222 37.8
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 3.1e-33 146.4 229 37.6
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 3.1e-33 146.4 141 52.5
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 1.5e-32 144.1 141 51.8
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 1.5e-32 144.1 223 38.1
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 2.0e-32 143.7 255 38.4
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 3.4e-32 142.9 141 53.2
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 4.4e-32 142.5 154 53.9
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 4.4e-32 142.5 152 52.6
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 7.5e-32 141.7 152 51.3
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 7.5e-32 141.7 207 39.1
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 1.3e-31 141.0 282 32.3
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 1.7e-31 140.6 141 51.8
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 1.7e-31 140.6 141 56.0
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 3.7e-31 139.4 139 52.5
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 4.9e-31 139.0 141 56.0
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 1.4e-30 137.5 141 55.3
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 7.0e-30 135.2 136 54.4
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 7.0e-30 135.2 142 52.1
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 1.2e-29 134.4 147 49.0
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 2.7e-29 133.3 238 37.0
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 1.7e-28 130.6 149 49.7
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 8.1e-26 121.7 154 44.8
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 4.0e-25 119.4 188 38.8
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 9.9e-24 114.8 148 42.6
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 6.4e-23 112.1 221 36.2
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 8.1e-18 95.1 77 48.1
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 9.9e-16 88.2 90 51.1
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 1.7e-15 87.4 59 61.0
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 4.7e-10 69.3 72 40.3
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 9.9e-08 61.6 70 37.1
AagrBONN_evm.TU.Sc2ySwM_344.3697 Anthoceros agrestis HOM05D011398 ORTHO05D007243 2.4e-06 57.0 185 22.2


User provided reference genes

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