Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005638 Sechium edule HOM05D003870 ORTHO05D004567 2.2e-76 288.9 145 100.0
CsaV3_3G025000 Cucumis sativus L. HOM05D003870 ORTHO05D004567 1.5e-72 276.2 145 94.5
MELO3C012971.2 Cucumis melo HOM05D003870 ORTHO05D004567 4.3e-72 274.6 145 93.8
ClCG07G013150 Citrullus lanatus HOM05D003870 ORTHO05D004567 2.1e-71 272.3 145 92.4
Sed0024359 Sechium edule HOM05D003870 ORTHO05D004567 4.7e-71 271.2 145 93.8
Ciclev10026722m.g Citrus clementina HOM05D003870 ORTHO05D004567 1.4e-67 259.6 145 86.9
PGR102G1204 Punica granatum HOM05D003870 ORTHO05D004567 1.0e-65 253.4 145 85.5
Dinv38024 Davidia involucrata HOM05D003870 ORTHO05D004567 3.0e-65 251.9 145 84.1
Phvul.010G148800 Phaseolus vulgaris HOM05D003870 ORTHO05D004567 5.0e-65 251.1 145 84.8
Glyma.07G019700 Glycine max HOM05D003870 ORTHO05D004567 6.6e-65 250.8 145 84.8
CANSAT56G1465 Cannabis sativa HOM05D003870 ORTHO05D004567 8.6e-65 250.4 145 84.1
Prupe.3G067400 Prunus persica HOM05D003870 ORTHO05D004567 8.6e-65 250.4 145 82.8
Manes.11G038100 Manihot esculenta HOM05D003870 ORTHO05D004567 1.1e-64 250.0 145 84.1
Sabra03G0026800 Salix brachista HOM05D003870 ORTHO05D004567 1.1e-64 250.0 145 82.8
Thecc.06G092200 Theobroma cacao HOM05D003870 ORTHO05D004567 1.1e-64 250.0 145 84.8
COL.COLO4_30434 Corchorus olitorius HOM05D003870 ORTHO05D004567 1.9e-64 249.2 145 84.8
Potri.003G052500 Populus trichocarpa HOM05D003870 ORTHO05D004567 1.9e-64 249.2 145 82.8
Hma1.2p1_1195F.1_g265780 Hydrangea macrophylla HOM05D003870 ORTHO05D004567 3.3e-64 248.4 146 85.6
Hma1.2p1_3147F.1_g333153 Hydrangea macrophylla HOM05D003870 ORTHO05D004567 3.3e-64 248.4 146 85.6
Cfa002093 Carpinus fangiana HOM05D003870 ORTHO05D004567 4.3e-64 248.1 145 83.4
Haze_16364 Corylus avellana HOM05D003870 ORTHO05D004567 4.3e-64 248.1 145 83.4
FAN14G2389 Fragaria x ananassa HOM05D003870 ORTHO05D004567 5.6e-64 247.7 145 82.1
Manes.04G129900 Manihot esculenta HOM05D003870 ORTHO05D004567 5.6e-64 247.7 145 83.4
VMungo0331G0764 Vigna mungo HOM05D003870 ORTHO05D004567 5.6e-64 247.7 145 83.4
CSS0004601 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 7.3e-64 247.3 145 84.1
CSS0022866 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 7.3e-64 247.3 145 84.1
SGA_v2.0_scaffold5G02558 Striga asiatica HOM05D003870 ORTHO05D004567 7.3e-64 247.3 145 85.5
FAN02G0928 Fragaria x ananassa HOM05D003870 ORTHO05D004567 9.5e-64 246.9 145 82.1
Glyma.08G204800 Glycine max HOM05D003870 ORTHO05D004567 9.5e-64 246.9 145 83.4
TWI12G1021 Tripterygium wilfordii HOM05D003870 ORTHO05D004567 9.5e-64 246.9 145 83.4
Ah.01g021620 Amaranthus hybridus HOM05D003870 ORTHO05D004567 1.6e-63 246.1 145 82.1
FAN05G2130 Fragaria x ananassa HOM05D003870 ORTHO05D004567 2.1e-63 245.7 145 81.4
Eucgr.F03038 Eucalyptus grandis HOM05D003870 ORTHO05D004567 3.6e-63 245.0 144 82.6
FvH4_6g31740 Fragaria vesca HOM05D003870 ORTHO05D004567 4.7e-63 244.6 145 81.4
Cpa.g.sc1182.1 Carica papaya HOM05D003870 ORTHO05D004567 6.2e-63 244.2 145 82.8
FAN09G1730 Fragaria x ananassa HOM05D003870 ORTHO05D004567 6.2e-63 244.2 145 80.7
Gohir.A05G131700 Gossypium hirsutum HOM05D003870 ORTHO05D004567 8.1e-63 243.8 145 82.1
RcHm_v2.0_Chr2g0138931 Rosa chinensis HOM05D003870 ORTHO05D004567 1.1e-62 243.4 145 80.0
CiPaw.01G235900 Carya illinoinensis HOM05D003870 ORTHO05D004567 1.4e-62 243.0 145 82.1
AUR62011659 Chenopodium quinoa HOM05D003870 ORTHO05D004567 1.4e-62 243.0 145 82.8
Glyma.15G016300 Glycine max HOM05D003870 ORTHO05D004567 1.4e-62 243.0 145 83.4
QL05p021780 Quercus lobata HOM05D003870 ORTHO05D004567 1.4e-62 243.0 144 83.3
Gohir.D05G131200 Gossypium hirsutum HOM05D003870 ORTHO05D004567 2.3e-62 242.3 145 81.4
Gorai.009G134900 Gossypium raimondii HOM05D003870 ORTHO05D004567 2.3e-62 242.3 145 81.4
DCAR_023061 Daucus carota HOM05D003870 ORTHO05D004567 3.1e-62 241.9 145 82.1
Duzib160G0587 Durio zibethinus HOM05D003870 ORTHO05D004567 3.1e-62 241.9 145 81.4
TAR383G0495 Trochodendron aralioides HOM05D003870 ORTHO05D004567 4.0e-62 241.5 145 82.1
arahy.Tifrunner.gnm1.ann1.71HCYD Arachis hypogaea HOM05D003870 ORTHO05D004567 5.2e-62 241.1 145 82.1
arahy.Tifrunner.gnm1.ann1.YBSA05 Arachis hypogaea HOM05D003870 ORTHO05D004567 5.2e-62 241.1 145 82.1
MD09G1209500 Malus domestica HOM05D003870 ORTHO05D004567 5.2e-62 241.1 145 80.0
Aqoxy7G01609 Aquilegia oxysepala HOM05D003870 ORTHO05D004567 8.9e-62 240.4 145 80.0
TAR626G1423 Trochodendron aralioides HOM05D003870 ORTHO05D004567 8.9e-62 240.4 145 81.4
Duzib235G0817 Durio zibethinus HOM05D003870 ORTHO05D004567 1.2e-61 240.0 145 81.4
Lj3g0012525 Lotus japonicus HOM05D003870 ORTHO05D004567 1.2e-61 240.0 149 81.2
Nn2g11696 Nelumbo nucifera HOM05D003870 ORTHO05D004567 1.2e-61 240.0 145 81.4
Nitab4.5_0018837g0020 Nicotiana tabacum HOM05D003870 ORTHO05D004567 1.2e-61 240.0 146 82.2
Migut.D01017 Erythranthe guttata HOM05D003870 ORTHO05D004567 1.5e-61 239.6 145 80.7
Nitab4.5_0000351g0060 Nicotiana tabacum HOM05D003870 ORTHO05D004567 1.5e-61 239.6 146 82.2
GSVIVG01017071001 Vitis vinifera HOM05D003870 ORTHO05D004567 1.5e-61 239.6 145 81.4
CSS0035581 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 2.0e-61 239.2 145 81.4
PGSC0003DMG400002626 Solanum tuberosum HOM05D003870 ORTHO05D004567 2.6e-61 238.8 146 82.2
TAR636G2531 Trochodendron aralioides HOM05D003870 ORTHO05D004567 2.6e-61 238.8 145 81.4
VMungo1080G1700 Vigna mungo HOM05D003870 ORTHO05D004567 2.6e-61 238.8 138 84.8
Solyc03g120640.3 Solanum lycopersicum HOM05D003870 ORTHO05D004567 3.4e-61 238.4 146 82.2
Migut.I00942 Erythranthe guttata HOM05D003870 ORTHO05D004567 4.4e-61 238.0 145 80.7
Lalb_Chr14g0373231 Lupinus albus HOM05D003870 ORTHO05D004567 5.8e-61 237.7 145 80.7
PGSC0003DMG400016504 Solanum tuberosum HOM05D003870 ORTHO05D004567 5.8e-61 237.7 146 82.2
MSTRG.11054 Avicennia marina HOM05D003870 ORTHO05D004567 7.5e-61 237.3 145 81.4
EL10Ac9g22029 Beta vulgaris HOM05D003870 ORTHO05D004567 7.5e-61 237.3 145 80.7
Nn3g18073 Nelumbo nucifera HOM05D003870 ORTHO05D004567 7.5e-61 237.3 146 80.8
TWI75G1362 Tripterygium wilfordii HOM05D003870 ORTHO05D004567 7.5e-61 237.3 146 81.5
CAN.G1152.5 Capsicum annuum HOM05D003870 ORTHO05D004567 1.3e-60 236.5 146 80.8
Medtr2g101820 Medicago truncatula HOM05D003870 ORTHO05D004567 1.7e-60 236.1 148 81.1
A08p02270 Brassica napus HOM05D003870 ORTHO05D004567 2.2e-60 235.7 146 81.5
Nitab4.5_0003418g0030 Nicotiana tabacum HOM05D003870 ORTHO05D004567 2.2e-60 235.7 146 81.5
Rhsim08G0223300 Rhododendron simsii HOM05D003870 ORTHO05D004567 2.2e-60 235.7 146 81.5
BcaC01g01311 Brassica carinata HOM05D003870 ORTHO05D004567 3.7e-60 235.0 146 81.5
BcaC01g01313 Brassica carinata HOM05D003870 ORTHO05D004567 3.7e-60 235.0 146 81.5
Nitab4.5_0001315g0130 Nicotiana tabacum HOM05D003870 ORTHO05D004567 3.7e-60 235.0 146 80.8
Sp1g38770 Schrenkiella parvula HOM05D003870 ORTHO05D004567 4.9e-60 234.6 146 80.8
Solyc06g066640.3 Solanum lycopersicum HOM05D003870 ORTHO05D004567 4.9e-60 234.6 146 80.8
HanXRQChr12g0360771 Helianthus annuus HOM05D003870 ORTHO05D004567 8.3e-60 233.8 145 78.6
BraA08t32272Z Brassica rapa HOM05D003870 ORTHO05D004567 1.1e-59 233.4 146 80.8
CAN.G438.27 Capsicum annuum HOM05D003870 ORTHO05D004567 1.1e-59 233.4 146 81.5
Cc04_g03050 Coffea canephora HOM05D003870 ORTHO05D004567 1.1e-59 233.4 145 80.7
Nitab4.5_0002859g0140 Nicotiana tabacum HOM05D003870 ORTHO05D004567 1.1e-59 233.4 146 80.8
Sopen06g024910 Solanum pennellii HOM05D003870 ORTHO05D004567 1.1e-59 233.4 146 80.1
C03p90500 Brassica napus HOM05D003870 ORTHO05D004567 1.4e-59 233.0 146 80.8
BolC3t21374H Brassica oleracea HOM05D003870 ORTHO05D004567 1.4e-59 233.0 146 80.8
Peaxi162Scf00015g00032 Petunia axillaris HOM05D003870 ORTHO05D004567 1.4e-59 233.0 146 80.1
Psat5g298080 Pisum sativum HOM05D003870 ORTHO05D004567 1.4e-59 233.0 147 78.2
PGSC0003DMG400007571 Solanum tuberosum HOM05D003870 ORTHO05D004567 1.4e-59 233.0 146 82.2
Lsat_1_v5_gn_5_130901 Lactuca sativa HOM05D003870 ORTHO05D004567 1.9e-59 232.6 145 80.7
PSO832G3918 Papaver somniferum HOM05D003870 ORTHO05D004567 3.2e-59 231.9 146 78.1
AT1G52230 Arabidopsis thaliana HOM05D003870 ORTHO05D004567 4.1e-59 231.5 146 80.1
A06p01960 Brassica napus HOM05D003870 ORTHO05D004567 4.1e-59 231.5 146 80.1
C06p07460 Brassica napus HOM05D003870 ORTHO05D004567 4.1e-59 231.5 146 80.1
BolC6t35835H Brassica oleracea HOM05D003870 ORTHO05D004567 4.1e-59 231.5 146 80.1
BraA06t23412Z Brassica rapa HOM05D003870 ORTHO05D004567 4.1e-59 231.5 146 80.1
CARHR042360 Cardamine hirsuta HOM05D003870 ORTHO05D004567 4.1e-59 231.5 146 80.1
Eucgr.J02958 Eucalyptus grandis HOM05D003870 ORTHO05D004567 4.1e-59 231.5 146 78.8
MBI01_g07179_MAGBIO Magnolia biondii HOM05D003870 ORTHO05D004567 4.1e-59 231.5 145 77.2
PSO782G2129 Papaver somniferum HOM05D003870 ORTHO05D004567 4.1e-59 231.5 146 78.1
Carub.0001s4120 Capsella rubella HOM05D003870 ORTHO05D004567 5.4e-59 231.1 146 80.1
CiPaw.02G148900 Carya illinoinensis HOM05D003870 ORTHO05D004567 5.4e-59 231.1 145 78.6
THA.LOC104810527 Tarenaya hassleriana HOM05D003870 ORTHO05D004567 9.2e-59 230.3 147 82.3
Actinidia21679 Actinidia chinensis HOM05D003870 ORTHO05D004567 1.2e-58 229.9 145 78.6
Lalb_Chr25g0279971 Lupinus albus HOM05D003870 ORTHO05D004567 1.2e-58 229.9 146 77.4
SGA_v2.0_scaffold69G23361 Striga asiatica HOM05D003870 ORTHO05D004567 1.2e-58 229.9 146 80.1
AT3G16140 Arabidopsis thaliana HOM05D003870 ORTHO05D004567 1.6e-58 229.6 146 78.1
Solyc12g044280.2 Solanum lycopersicum HOM05D003870 ORTHO05D004567 1.6e-58 229.6 145 80.0
Sopen12g022520 Solanum pennellii HOM05D003870 ORTHO05D004567 1.6e-58 229.6 145 80.0
vmacro16969 Vaccinium macrocarpon HOM05D003870 ORTHO05D004567 2.1e-58 229.2 145 78.6
vmacro18888 Vaccinium macrocarpon HOM05D003870 ORTHO05D004567 2.1e-58 229.2 146 80.8
BcaB04g18888 Brassica carinata HOM05D003870 ORTHO05D004567 2.7e-58 228.8 146 78.8
ECA234G4669 Erigeron canadensis HOM05D003870 ORTHO05D004567 2.7e-58 228.8 142 78.2
Thhalv10011814m.g Eutrema salsugineum HOM05D003870 ORTHO05D004567 2.7e-58 228.8 146 78.8
Aa31LG10G2680 Aethionema arabicum HOM05D003870 ORTHO05D004567 3.5e-58 228.4 146 78.8
AL3G28820 Arabidopsis lyrata HOM05D003870 ORTHO05D004567 3.5e-58 228.4 146 78.1
Glyma.13G357300 Glycine max HOM05D003870 ORTHO05D004567 4.6e-58 228.0 137 83.2
Thhalv10021715m.g Eutrema salsugineum HOM05D003870 ORTHO05D004567 6.0e-58 227.6 146 78.1
Sp3g14500 Schrenkiella parvula HOM05D003870 ORTHO05D004567 6.0e-58 227.6 146 78.1
BcaC05g28907 Brassica carinata HOM05D003870 ORTHO05D004567 1.0e-57 226.9 146 78.1
C05p50360 Brassica napus HOM05D003870 ORTHO05D004567 1.0e-57 226.9 146 78.1
BolC5t33784H Brassica oleracea HOM05D003870 ORTHO05D004567 1.0e-57 226.9 146 78.1
Peaxi162Scf00034g00513 Petunia axillaris HOM05D003870 ORTHO05D004567 1.0e-57 226.9 143 79.7
Carub.0003s1588 Capsella rubella HOM05D003870 ORTHO05D004567 1.7e-57 226.1 146 77.4
Oeu029644.1 Olea europaea HOM05D003870 ORTHO05D004567 1.7e-57 226.1 145 78.6
CARHR091300 Cardamine hirsuta HOM05D003870 ORTHO05D004567 2.3e-57 225.7 146 76.0
A01p37960 Brassica napus HOM05D003870 ORTHO05D004567 3.9e-57 224.9 146 77.4
Lsat_1_v5_gn_1_35241 Lactuca sativa HOM05D003870 ORTHO05D004567 3.9e-57 224.9 145 79.3
BcaB04g17164 Brassica carinata HOM05D003870 ORTHO05D004567 8.6e-57 223.8 144 78.5
A05p33360 Brassica napus HOM05D003870 ORTHO05D004567 8.6e-57 223.8 146 77.4
BraA05t22161Z Brassica rapa HOM05D003870 ORTHO05D004567 8.6e-57 223.8 146 77.4
THA.LOC104817982 Tarenaya hassleriana HOM05D003870 ORTHO05D004567 1.5e-56 223.0 146 78.1
BraA01t03856Z Brassica rapa HOM05D003870 ORTHO05D004567 2.5e-56 222.2 146 76.7
BcaB06g25707 Brassica carinata HOM05D003870 ORTHO05D004567 3.3e-56 221.9 146 76.7
Oeu024071.1 Olea europaea HOM05D003870 ORTHO05D004567 5.6e-56 221.1 136 78.7
Rhsim12G0200100 Rhododendron simsii HOM05D003870 ORTHO05D004567 9.5e-56 220.3 145 75.9
unitig_0.g2124 Utricularia gibba HOM05D003870 ORTHO05D004567 2.8e-55 218.8 145 75.9
CDE02G4568 Ceratophyllum demersum HOM05D003870 ORTHO05D004567 2.6e-53 212.2 146 71.2
Hund00643 Selenicereus undatus HOM05D003870 ORTHO05D004567 3.4e-53 211.8 147 74.1
Sc15g0001350 Simmondsia chinensis HOM05D003870 ORTHO05D004567 7.6e-53 210.7 145 75.2
CDE04G3706 Ceratophyllum demersum HOM05D003870 ORTHO05D004567 9.9e-53 210.3 146 70.5
Os05g0560000 Oryza sativa ssp. japonica HOM05D003870 ORTHO05D004567 2.2e-52 209.1 144 74.3
ATR0315G019 Amborella trichopoda HOM05D003870 ORTHO05D004567 2.9e-52 208.8 145 72.4
Nitab4.5_0001968g0090 Nicotiana tabacum HOM05D003870 ORTHO05D004567 1.1e-51 206.8 146 75.3
Zm00001eb295610 Zea mays HOM05D003870 ORTHO05D004567 1.4e-51 206.5 146 74.0
AUR62016482 Chenopodium quinoa HOM05D003870 ORTHO05D004567 1.9e-51 206.1 145 73.8
Actinidia32731 Actinidia chinensis HOM05D003870 ORTHO05D004567 9.2e-51 203.8 130 76.9
Sopen00g011820 Solanum pennellii HOM05D003870 ORTHO05D004567 5.1e-49 198.0 103 90.3
TPR.G37200 Trifolium pratense HOM05D003870 ORTHO05D004567 1.9e-48 196.1 147 72.1
AL1G60400 Arabidopsis lyrata HOM05D003870 ORTHO05D004567 1.2e-45 186.8 103 85.4
BcaC08g43379 Brassica carinata HOM05D003870 ORTHO05D004567 1.3e-44 183.3 102 86.3
SEGI_14279 Sequoiadendron giganteum HOM05D003870 ORTHO05D004567 7.1e-43 177.6 147 63.9
HPP92_021482 Vanilla planifolia HOM05D003870 ORTHO05D004567 8.7e-41 170.6 137 69.3
Duzib192G0641 Durio zibethinus HOM05D003870 ORTHO05D004567 3.6e-39 165.2 98 82.7
Pp3c9_19520 Physcomitrium patens HOM05D003870 ORTHO05D004567 3.4e-37 158.7 136 57.4
Pp3c15_19390 Physcomitrium patens HOM05D003870 ORTHO05D004567 7.6e-37 157.5 136 55.9
CBR_g31512 Chara braunii HOM05D003870 ORTHO05D004567 9.3e-35 150.6 142 57.0
Mapoly0009s0008 Marchantia polymorpha HOM05D003870 ORTHO05D004567 5.1e-33 144.8 147 56.5
Dinv30483 Davidia involucrata HOM05D003870 ORTHO05D004567 1.1e-32 143.7 108 67.6
C01p48190 Brassica napus HOM05D003870 ORTHO05D004567 1.6e-31 139.8 145 55.9
MD17G1191200 Malus domestica HOM05D003870 ORTHO05D004567 2.1e-31 139.4 85 78.8
BolC1t04783H Brassica oleracea HOM05D003870 ORTHO05D004567 4.8e-31 138.3 145 55.9
Peaxi162Scf00207g00951 Petunia axillaris HOM05D003870 ORTHO05D004567 2.9e-28 129.0 146 55.5
HanXRQChr10g0313451 Helianthus annuus HOM05D003870 ORTHO05D004567 6.4e-28 127.9 85 74.1
ECA247G2331 Erigeron canadensis HOM05D003870 ORTHO05D004567 1.0e-25 120.6 72 77.8
MD17G1191400 Malus domestica HOM05D003870 ORTHO05D004567 2.4e-22 109.4 60 85.0
MD10G1187500 Malus domestica HOM05D003870 ORTHO05D004567 7.1e-19 97.8 74 64.9
MCO07G351 Micromonas commoda HOM05D003870 ORTHO05D004567 1.0e-17 94.0 126 41.3
MD14G1193300 Malus domestica HOM05D003870 ORTHO05D004567 1.3e-15 87.0 74 60.8
Cre07.g330250 Chlamydomonas reinhardtii HOM05D003870 ORTHO05D004567 7.7e-13 77.8 103 42.7
Zm00001eb343540 Zea mays HOM05D003870 ORTHO05D004567 1.4e-11 73.6 132 44.7
unitig_747.g21485 Utricularia gibba HOM05D003870 ORTHO05D004567 1.2e-10 70.5 142 38.7
MD02G1178900 Malus domestica HOM05D003870 ORTHO05D004567 7.9e-10 67.8 33 90.9


User provided reference genes

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