Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 6.8e-61 237.3 131 100.0
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 6.0e-57 224.2 131 94.7
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 8.6e-56 220.3 131 92.4
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 1.1e-55 219.9 131 91.6
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 3.3e-55 218.4 131 91.6
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 3.6e-54 214.9 131 89.3
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 6.2e-54 214.2 131 88.5
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 8.1e-54 213.8 131 89.3
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.1e-53 213.4 131 89.3
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.1e-53 213.4 131 87.8
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 1.8e-53 212.6 130 89.2
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 1.8e-53 212.6 131 87.8
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 2.3e-53 212.2 127 92.1
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 3.1e-53 211.8 131 87.8
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.1e-53 211.8 130 89.2
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 4.0e-53 211.5 131 87.0
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 8.9e-53 210.3 131 86.3
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 1.2e-52 209.9 131 87.0
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 2.0e-52 209.1 131 85.5
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.0e-52 209.1 130 88.5
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.0e-52 209.1 130 88.5
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.0e-52 209.1 130 88.5
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 2.0e-52 209.1 131 85.5
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 2.6e-52 208.8 130 88.5
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 4.4e-52 208.0 129 86.8
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 4.4e-52 208.0 130 88.5
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 4.4e-52 208.0 127 88.2
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 4.4e-52 208.0 127 89.0
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 4.4e-52 208.0 131 87.0
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 4.4e-52 208.0 131 86.3
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 5.8e-52 207.6 131 87.0
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 7.6e-52 207.2 127 88.2
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 9.9e-52 206.8 131 88.5
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 9.9e-52 206.8 130 88.5
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 9.9e-52 206.8 131 85.5
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 1.3e-51 206.5 131 85.5
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 1.3e-51 206.5 131 85.5
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 2.2e-51 205.7 129 86.8
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 2.9e-51 205.3 126 88.9
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 3.7e-51 204.9 131 83.2
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.7e-51 204.9 130 85.4
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 3.7e-51 204.9 129 85.3
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 3.7e-51 204.9 131 84.7
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 3.7e-51 204.9 131 82.4
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 4.9e-51 204.5 127 86.6
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 4.9e-51 204.5 129 86.0
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 4.9e-51 204.5 129 85.3
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 4.9e-51 204.5 129 86.0
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 8.4e-51 203.8 129 85.3
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 8.4e-51 203.8 131 83.2
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 8.4e-51 203.8 127 86.6
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 8.4e-51 203.8 129 86.0
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 1.1e-50 203.4 127 87.4
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 1.1e-50 203.4 130 84.6
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 1.1e-50 203.4 130 86.2
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.4e-50 203.0 131 84.0
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 1.4e-50 203.0 131 81.7
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 2.4e-50 202.2 131 81.7
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 3.2e-50 201.8 123 87.8
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 4.1e-50 201.4 129 83.7
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 7.1e-50 200.7 186 67.2
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 9.2e-50 200.3 130 83.1
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 9.2e-50 200.3 130 82.3
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 9.2e-50 200.3 130 82.3
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.2e-49 199.9 130 86.2
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 3.5e-49 198.4 129 81.4
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 6.0e-49 197.6 131 80.2
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 6.0e-49 197.6 131 80.2
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 6.0e-49 197.6 131 80.2
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 1.3e-48 196.4 138 79.7
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 2.3e-48 195.7 131 79.4
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 2.3e-48 195.7 131 79.4
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 2.3e-48 195.7 140 79.3
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 6.6e-48 194.1 131 80.9
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 5.6e-47 191.0 113 90.3
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 5.6e-47 191.0 131 79.4
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 5.6e-47 191.0 131 76.3
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 1.2e-46 189.9 130 79.2
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 1.2e-46 189.9 113 87.6
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.8e-45 186.0 141 74.5
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 2.4e-45 185.7 129 76.7
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 4.0e-45 184.9 134 78.4
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 4.0e-45 184.9 129 76.7
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 6.8e-45 184.1 113 86.7
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 1.5e-44 183.0 126 77.8
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 2.6e-44 182.2 111 88.3
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.4e-44 181.8 121 84.3
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 5.8e-44 181.0 124 75.0
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 9.9e-44 180.3 106 90.6
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 1.7e-43 179.5 105 92.4
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.9e-43 178.7 121 82.6
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 3.8e-43 178.3 111 81.1
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 1.1e-42 176.8 116 86.2
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 1.1e-42 176.8 129 73.6
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 1.9e-42 176.0 108 85.2
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 4.2e-42 174.9 107 84.1
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 5.4e-42 174.5 111 81.1
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 7.1e-42 174.1 122 80.3
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 1.6e-41 172.9 129 75.2
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 2.7e-41 172.2 113 78.8
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 2.7e-41 172.2 105 86.7
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 6.0e-41 171.0 127 74.8
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 1.3e-40 169.9 111 79.3
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 2.3e-40 169.1 112 80.4
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 3.3e-39 165.2 110 80.0
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 4.3e-39 164.9 105 81.9
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 1.6e-38 162.9 97 90.7
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 2.1e-38 162.5 131 71.0
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 2.8e-38 162.2 92 93.5
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 3.6e-38 161.8 124 67.7
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 3.1e-37 158.7 112 76.8
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 6.9e-37 157.5 163 57.7
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 9.0e-37 157.1 133 68.4
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 1.2e-36 156.8 87 93.1
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 1.2e-36 156.8 87 92.0
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 1.2e-36 156.8 124 69.4
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 5.8e-36 154.5 131 61.8
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 5.8e-36 154.5 125 65.6
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 5.8e-36 154.5 92 85.9
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 1.7e-35 152.9 97 82.5
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 2.2e-35 152.5 92 89.1
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 2.9e-35 152.1 91 86.8
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 4.9e-35 151.4 117 72.6
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 1.6e-33 146.4 109 66.1
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 2.7e-33 145.6 84 85.7
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 2.3e-32 142.5 87 88.5
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 3.0e-32 142.1 92 79.3
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 5.1e-32 141.4 95 76.8
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 1.1e-31 140.2 88 85.2
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 1.5e-31 139.8 131 65.6
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 4.8e-30 134.8 95 81.1
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 1.8e-29 132.9 90 76.7
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 4.0e-29 131.7 102 72.5
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 4.9e-27 124.8 71 88.7
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 7.1e-26 120.9 88 73.9
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 3.5e-25 118.6 65 90.8
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 3.5e-25 118.6 92 70.7
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 1.9e-23 112.8 63 92.1
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 7.4e-23 110.9 188 44.1
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 6.2e-22 107.8 124 46.8
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 5.3e-21 104.8 121 44.6
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 6.9e-21 104.4 61 85.2
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 2.2e-19 99.4 67 73.1
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 4.9e-19 98.2 111 55.9
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 6.5e-19 97.8 64 75.0
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 1.9e-18 96.3 64 73.4
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 7.1e-18 94.4 85 57.6
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 9.3e-18 94.0 66 71.2
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 2.1e-17 92.8 65 72.3
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 1.8e-16 89.7 68 66.2
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 4.8e-14 81.6 119 42.9
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 1.1e-13 80.5 173 38.7
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.7e-11 73.2 123 35.0
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 2.3e-08 62.8 124 37.9
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea HOM05D004997 ORTHO05D005921 5.7e-07 58.2 39 82.1


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