Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005506 Sechium edule HOM05D007557 ORTHO05D009573 2.8e-55 218.4 111 100.0
ClCG11G014080 Citrullus lanatus HOM05D007557 ORTHO05D009573 1.8e-46 189.1 111 84.7
MELO3C003576.2 Cucumis melo HOM05D007557 ORTHO05D009573 1.0e-41 173.3 111 74.8
QL12p036790 Quercus lobata HOM05D007557 ORTHO05D009573 7.9e-34 147.1 110 66.4
CiPaw.07G179800 Carya illinoinensis HOM05D007557 ORTHO05D009573 1.9e-32 142.5 111 64.0
Cpa.g.sc36.133 Carica papaya HOM05D007557 ORTHO05D009573 5.6e-32 141.0 111 62.2
TAR625G0198 Trochodendron aralioides HOM05D007557 ORTHO05D009573 2.1e-31 139.0 111 59.5
Cfa013637 Carpinus fangiana HOM05D007557 ORTHO05D009573 2.8e-31 138.7 111 63.1
MD15G1369400 Malus domestica HOM05D007557 ORTHO05D009573 5.3e-30 134.4 111 59.5
COL.COLO4_16396 Corchorus olitorius HOM05D007557 ORTHO05D009573 1.5e-29 132.9 111 55.9
TPR.G34528 Trifolium pratense HOM05D007557 ORTHO05D009573 1.5e-29 132.9 111 57.7
Prupe.1G517300 Prunus persica HOM05D007557 ORTHO05D009573 2.0e-29 132.5 111 58.6
TWI12G0426 Tripterygium wilfordii HOM05D007557 ORTHO05D009573 2.6e-29 132.1 111 59.5
MD08G1183000 Malus domestica HOM05D007557 ORTHO05D009573 3.4e-29 131.7 111 58.6
Eucgr.F00324 Eucalyptus grandis HOM05D007557 ORTHO05D009573 5.8e-29 131.0 111 58.6
Glyma.04G102200 Glycine max HOM05D007557 ORTHO05D009573 5.8e-29 131.0 112 58.0
Atru.chr13.1185 Acer truncatum HOM05D007557 ORTHO05D009573 9.9e-29 130.2 109 58.7
CDE06G2682 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 1.7e-28 129.4 108 60.2
Duzib041G0047 Durio zibethinus HOM05D007557 ORTHO05D009573 1.7e-28 129.4 111 55.0
Gorai.009G281300 Gossypium raimondii HOM05D007557 ORTHO05D009573 1.7e-28 129.4 111 55.9
RcHm_v2.0_Chr7g0238961 Rosa chinensis HOM05D007557 ORTHO05D009573 1.7e-28 129.4 113 59.3
arahy.Tifrunner.gnm1.ann1.JHL0SX Arachis hypogaea HOM05D007557 ORTHO05D009573 2.9e-28 128.6 111 56.8
CDE03G0188 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 4.9e-28 127.9 108 59.3
Glyma.06G103500 Glycine max HOM05D007557 ORTHO05D009573 4.9e-28 127.9 112 57.1
Lj1g0024074 Lotus japonicus HOM05D007557 ORTHO05D009573 4.9e-28 127.9 111 58.6
Phvul.009G031100 Phaseolus vulgaris HOM05D007557 ORTHO05D009573 4.9e-28 127.9 111 55.0
arahy.Tifrunner.gnm1.ann1.VD5D9J Arachis hypogaea HOM05D007557 ORTHO05D009573 6.4e-28 127.5 111 56.8
Gohir.A05G267100 Gossypium hirsutum HOM05D007557 ORTHO05D009573 1.1e-27 126.7 111 54.1
Prupe.1G519000 Prunus persica HOM05D007557 ORTHO05D009573 1.1e-27 126.7 111 57.7
CANSAT25G0704 Cannabis sativa HOM05D007557 ORTHO05D009573 1.4e-27 126.3 111 54.1
CsaV3_3G047480 Cucumis sativus L. HOM05D007557 ORTHO05D009573 1.4e-27 126.3 86 75.6
FAN08G0381 Fragaria x ananassa HOM05D007557 ORTHO05D009573 1.9e-27 125.9 112 58.0
Lalb_Chr23g0270571 Lupinus albus HOM05D007557 ORTHO05D009573 2.4e-27 125.6 107 55.1
Thecc.08G106600 Theobroma cacao HOM05D007557 ORTHO05D009573 2.4e-27 125.6 111 52.3
VMungo1309G0845 Vigna mungo HOM05D007557 ORTHO05D009573 2.4e-27 125.6 111 55.9
BcaB03g13675 Brassica carinata HOM05D007557 ORTHO05D009573 4.2e-27 124.8 111 56.8
Duzib093G0460 Durio zibethinus HOM05D007557 ORTHO05D009573 4.2e-27 124.8 111 53.2
FvH4_5g37320 Fragaria vesca HOM05D007557 ORTHO05D009573 5.5e-27 124.4 112 57.1
FAN18G1226 Fragaria x ananassa HOM05D007557 ORTHO05D009573 5.5e-27 124.4 112 57.1
Gohir.D05G268700 Gossypium hirsutum HOM05D007557 ORTHO05D009573 7.1e-27 124.0 111 55.0
Medtr3g074500 Medicago truncatula HOM05D007557 ORTHO05D009573 7.1e-27 124.0 105 55.2
Duzib093G1199 Durio zibethinus HOM05D007557 ORTHO05D009573 2.7e-26 122.1 111 52.3
FAN04G0616 Fragaria x ananassa HOM05D007557 ORTHO05D009573 2.7e-26 122.1 111 55.9
PSO447G0314 Papaver somniferum HOM05D007557 ORTHO05D009573 2.7e-26 122.1 111 54.1
Cc10_g07180 Coffea canephora HOM05D007557 ORTHO05D009573 3.5e-26 121.7 112 54.5
PSO210G0208 Papaver somniferum HOM05D007557 ORTHO05D009573 3.5e-26 121.7 111 54.1
Nn1g05358 Nelumbo nucifera HOM05D007557 ORTHO05D009573 4.6e-26 121.3 111 55.9
Dinv44776 Davidia involucrata HOM05D007557 ORTHO05D009573 7.9e-26 120.6 111 56.8
Psat5g138560 Pisum sativum HOM05D007557 ORTHO05D009573 7.9e-26 120.6 108 52.8
Psat5g138640 Pisum sativum HOM05D007557 ORTHO05D009573 7.9e-26 120.6 108 52.8
Hund26963 Selenicereus undatus HOM05D007557 ORTHO05D009573 7.9e-26 120.6 112 54.5
AT1G34640 Arabidopsis thaliana HOM05D007557 ORTHO05D009573 1.8e-25 119.4 110 55.5
vmacro21268 Vaccinium macrocarpon HOM05D007557 ORTHO05D009573 2.3e-25 119.0 111 49.5
BraA05t21266Z Brassica rapa HOM05D007557 ORTHO05D009573 3.0e-25 118.6 111 51.4
CARHR033940 Cardamine hirsuta HOM05D007557 ORTHO05D009573 3.0e-25 118.6 110 52.7
BcaC05g27757 Brassica carinata HOM05D007557 ORTHO05D009573 3.9e-25 118.2 111 52.3
Rhsim06G0081800 Rhododendron simsii HOM05D007557 ORTHO05D009573 3.9e-25 118.2 117 49.6
Actinidia30774 Actinidia chinensis HOM05D007557 ORTHO05D009573 6.7e-25 117.5 111 54.1
Carub.0001s3264 Capsella rubella HOM05D007557 ORTHO05D009573 8.7e-25 117.1 110 53.6
C05p37510 Brassica napus HOM05D007557 ORTHO05D009573 1.1e-24 116.7 111 50.5
BolC5t32491H Brassica oleracea HOM05D007557 ORTHO05D009573 1.1e-24 116.7 111 50.5
MBI05_g37049_MAGBIO Magnolia biondii HOM05D007557 ORTHO05D009573 1.1e-24 116.7 110 50.0
Aqoxy6G00779 Aquilegia oxysepala HOM05D007557 ORTHO05D009573 1.5e-24 116.3 108 51.9
HanXRQChr05g0162891 Helianthus annuus HOM05D007557 ORTHO05D009573 1.9e-24 115.9 110 51.8
Duzib116G0255 Durio zibethinus HOM05D007557 ORTHO05D009573 4.3e-24 114.8 111 50.5
Thhalv10001839m.g Eutrema salsugineum HOM05D007557 ORTHO05D009573 5.6e-24 114.4 111 50.5
Hund16904 Selenicereus undatus HOM05D007557 ORTHO05D009573 5.6e-24 114.4 108 51.9
Sp1g29760 Schrenkiella parvula HOM05D007557 ORTHO05D009573 7.4e-24 114.0 111 50.5
Manes.02G152600 Manihot esculenta HOM05D007557 ORTHO05D009573 9.6e-24 113.6 108 54.6
Potri.002G096700 Populus trichocarpa HOM05D007557 ORTHO05D009573 1.6e-23 112.8 111 52.3
THA.LOC104816752 Tarenaya hassleriana HOM05D007557 ORTHO05D009573 3.7e-23 111.7 111 51.4
Sc26g0000100 Simmondsia chinensis HOM05D007557 ORTHO05D009573 4.8e-23 111.3 109 48.6
A05p23900 Brassica napus HOM05D007557 ORTHO05D009573 6.2e-23 110.9 98 53.1
Lsat_1_v5_gn_6_103041 Lactuca sativa HOM05D007557 ORTHO05D009573 1.1e-22 110.2 111 50.5
Ah.05g169950 Amaranthus hybridus HOM05D007557 ORTHO05D009573 3.1e-22 108.6 111 49.5
Lj4A102T59 Lonicera japonica HOM05D007557 ORTHO05D009573 4.0e-22 108.2 115 51.3
HPP92_005842 Vanilla planifolia HOM05D007557 ORTHO05D009573 3.4e-21 105.1 113 47.8
Os07g0622900 Oryza sativa ssp. japonica HOM05D007557 ORTHO05D009573 7.6e-21 104.0 113 46.9
Zm00001eb327820 Zea mays HOM05D007557 ORTHO05D009573 1.0e-20 103.6 113 46.9
Haze_22270 Corylus avellana HOM05D007557 ORTHO05D009573 1.7e-20 102.8 110 50.0
PGR042G1134 Punica granatum HOM05D007557 ORTHO05D009573 8.4e-20 100.5 94 54.3
Nitab4.5_0000232g0140 Nicotiana tabacum HOM05D007557 ORTHO05D009573 1.4e-19 99.8 111 47.7
Nitab4.5_0003631g0020 Nicotiana tabacum HOM05D007557 ORTHO05D009573 4.2e-19 98.2 98 52.0
DCAR_012735 Daucus carota HOM05D007557 ORTHO05D009573 5.5e-19 97.8 114 41.2
Migut.N02896 Erythranthe guttata HOM05D007557 ORTHO05D009573 6.0e-18 94.4 110 42.7
Ciclev10003485m.g Citrus clementina HOM05D007557 ORTHO05D009573 3.0e-17 92.0 68 64.7
Solyc12g057030.2 Solanum lycopersicum HOM05D007557 ORTHO05D009573 7.4e-16 87.4 104 40.4
EL10Ac1g01212 Beta vulgaris HOM05D007557 ORTHO05D009573 1.6e-15 86.3 68 58.8
AUR62027760 Chenopodium quinoa HOM05D007557 ORTHO05D009573 1.6e-15 86.3 64 64.1
CAN.G222.163 Capsicum annuum HOM05D007557 ORTHO05D009573 2.8e-15 85.5 104 41.3
PGSC0003DMG400008555 Solanum tuberosum HOM05D007557 ORTHO05D009573 3.7e-15 85.1 97 40.2
Nn5g30104 Nelumbo nucifera HOM05D007557 ORTHO05D009573 2.4e-14 82.4 67 55.2
Zm00001eb109640 Zea mays HOM05D007557 ORTHO05D009573 1.0e-12 77.0 69 56.5
Sopen12g029690 Solanum pennellii HOM05D007557 ORTHO05D009573 2.2e-12 75.9 80 42.5
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 1.4e-11 73.2 115 35.7
Aa31LG6G8510 Aethionema arabicum HOM05D007557 ORTHO05D009573 4.2e-11 71.6 82 47.6
AUR62038525 Chenopodium quinoa HOM05D007557 ORTHO05D000493 9.1e-06 53.9 34 67.6


User provided reference genes

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