Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 9.3e-90 333.6 174 100.0
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 1.1e-50 203.8 169 68.6
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 3.2e-50 202.2 182 67.6
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 7.2e-50 201.1 177 66.7
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 9.7e-39 164.1 163 57.7
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 4.2e-34 148.7 164 58.5
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.2e-33 147.1 151 57.6
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.7e-33 146.0 151 58.3
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.7e-33 146.0 151 58.3
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 2.7e-33 146.0 167 56.9
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 2.7e-33 146.0 181 55.2
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.7e-33 145.2 151 57.6
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 8.0e-33 144.4 151 57.6
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 1.0e-32 144.1 159 54.7
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 1.8e-32 143.3 164 56.7
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 6.8e-32 141.4 177 49.7
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 6.8e-32 141.4 151 55.6
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 8.8e-32 141.0 170 52.4
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 1.5e-31 140.2 170 52.9
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 2.6e-31 139.4 158 53.8
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 3.4e-31 139.0 168 54.2
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 3.4e-31 139.0 165 54.5
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 5.7e-31 138.3 168 54.2
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 7.5e-31 137.9 188 50.0
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 1.7e-30 136.7 175 50.9
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 1.7e-30 136.7 171 51.5
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 1.7e-30 136.7 176 51.7
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 2.2e-30 136.3 168 53.6
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 2.8e-30 136.0 162 53.7
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 8.3e-30 134.4 165 53.9
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 3.1e-29 132.5 162 53.1
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 2.0e-28 129.8 174 47.7
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 2.7e-28 129.4 177 48.0
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 2.3e-27 126.3 161 51.6
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 5.0e-27 125.2 173 50.9
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 1.9e-26 123.2 160 48.1
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 3.3e-26 122.5 164 50.0
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 5.5e-26 121.7 160 48.8
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 4.7e-25 118.6 179 44.1
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 1.4e-24 117.1 174 42.5
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 6.8e-24 114.8 167 45.5
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 1.5e-23 113.6 147 46.3
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 5.7e-23 111.7 165 46.7
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 7.5e-23 111.3 157 48.4
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 2.8e-22 109.4 142 50.0
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 8.3e-22 107.8 180 41.7
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 1.8e-21 106.7 169 46.2
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.8e-21 106.7 156 41.7
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 4.1e-21 105.5 151 45.7
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 4.1e-21 105.5 156 41.0
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 5.4e-21 105.1 166 45.8
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 9.2e-21 104.4 184 40.8
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 9.2e-21 104.4 160 41.9
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 7.8e-20 101.3 143 46.9
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 1.0e-19 100.9 157 42.7
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 1.0e-19 100.9 174 42.5
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 2.3e-19 99.8 156 46.2
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 2.9e-19 99.4 154 45.5
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 2.9e-19 99.4 169 40.2
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 3.8e-19 99.0 164 40.9
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 3.8e-19 99.0 157 45.9
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 5.0e-19 98.6 155 43.9
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 6.6e-19 98.2 150 44.0
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 6.6e-19 98.2 148 43.2
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 3.3e-18 95.9 157 44.6
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 3.3e-18 95.9 157 43.3
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 9.5e-18 94.4 158 44.3
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 1.6e-17 93.6 150 44.7
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 2.1e-17 93.2 151 43.7
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 2.1e-17 93.2 151 43.7
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 3.6e-17 92.4 108 57.4
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 4.7e-17 92.0 157 44.6
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 8.0e-17 91.3 171 38.6
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 1.8e-16 90.1 179 36.3
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 1.8e-16 90.1 144 45.1
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 4.0e-16 89.0 152 42.1
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 5.2e-16 88.6 156 44.2
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 5.2e-16 88.6 184 38.0
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 6.8e-16 88.2 185 37.8
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 8.9e-16 87.8 156 44.2
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 1.5e-15 87.0 168 37.5
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 2.0e-15 86.7 170 38.2
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 3.4e-15 85.9 154 42.9
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 4.4e-15 85.5 182 37.9
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 6.4e-14 81.6 163 42.9
MBI12_g45243_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 1.1e-13 80.9 160 40.6
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 1.4e-13 80.5 158 39.9
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 5.4e-13 78.6 149 38.9
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 6.0e-12 75.1 180 37.2
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 1.7e-11 73.6 175 34.9
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 1.1e-10 70.9 98 44.9
AUR62033366 Chenopodium quinoa HOM05D007580 ORTHO05D009620 1.1e-08 64.3 89 44.9
AUR62026657 Chenopodium quinoa HOM05D007580 ORTHO05D009620 1.4e-08 63.9 131 38.9
FAN10G0406 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.2e-07 60.8 62 58.1


User provided reference genes

Program Settings