Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005347 Sechium edule HOM05D006179 ORTHO05D008370 6.5e-165 583.9 287 100.0
ClCG02G022800 Citrullus lanatus HOM05D006179 ORTHO05D008370 5.6e-132 474.6 305 78.7
Cfa009884 Carpinus fangiana HOM05D006179 ORTHO05D008370 3.3e-108 395.6 301 67.4
COL.COLO4_24491 Corchorus olitorius HOM05D006179 ORTHO05D008370 7.3e-108 394.4 304 66.4
QL01p016926 Quercus lobata HOM05D006179 ORTHO05D008370 3.6e-107 392.1 299 68.2
Potri.009G069300 Populus trichocarpa HOM05D006179 ORTHO05D008370 1.4e-106 390.2 300 67.7
Gohir.A07G121100 Gossypium hirsutum HOM05D006179 ORTHO05D008370 2.4e-106 389.4 299 65.9
CsaV3_6G038930 Cucumis sativus L. HOM05D006179 ORTHO05D008370 4.0e-106 388.7 250 78.0
Gohir.D07G125300 Gossypium hirsutum HOM05D006179 ORTHO05D008370 6.8e-106 387.9 299 65.6
PGR119G2402 Punica granatum HOM05D006179 ORTHO05D008370 1.2e-105 387.1 308 66.2
GSVIVG01037292001 Vitis vinifera HOM05D006179 ORTHO05D008370 1.5e-105 386.7 301 66.4
Prupe.4G263800 Prunus persica HOM05D006179 ORTHO05D008370 2.0e-105 386.3 301 67.1
RcHm_v2.0_Chr5g0050451 Rosa chinensis HOM05D006179 ORTHO05D008370 2.9e-104 382.5 305 66.6
MD11G1184200 Malus domestica HOM05D006179 ORTHO05D008370 6.4e-104 381.3 294 67.0
CiPaw.14G111900 Carya illinoinensis HOM05D006179 ORTHO05D008370 8.4e-104 380.9 308 66.2
MELO3C014557.2 Cucumis melo HOM05D006179 ORTHO05D008370 1.4e-103 380.2 250 76.8
Atru.chr3.2957 Acer truncatum HOM05D006179 ORTHO05D008370 4.2e-103 378.6 299 64.2
Thecc.09G246900 Theobroma cacao HOM05D006179 ORTHO05D008370 1.2e-102 377.1 357 57.4
CANSAT54G1770 Cannabis sativa HOM05D006179 ORTHO05D008370 2.1e-102 376.3 308 62.7
CSS0020940 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 3.5e-102 375.6 299 66.2
Hma1.2p1_0470F.1_g159226 Hydrangea macrophylla HOM05D006179 ORTHO05D008370 6.0e-102 374.8 263 70.0
Medtr5g089330 Medicago truncatula HOM05D006179 ORTHO05D008370 6.0e-102 374.8 238 75.2
FAN25G1664 Fragaria x ananassa HOM05D006179 ORTHO05D008370 1.0e-101 374.0 294 66.7
TAR623G0610 Trochodendron aralioides HOM05D006179 ORTHO05D008370 1.7e-101 373.2 302 65.6
Lalb_Chr04g0249261 Lupinus albus HOM05D006179 ORTHO05D008370 2.3e-101 372.9 251 72.5
FvH4_3g27810 Fragaria vesca HOM05D006179 ORTHO05D008370 1.9e-100 369.8 294 66.7
Glyma.02G279000 Glycine max HOM05D006179 ORTHO05D008370 1.9e-100 369.8 268 70.1
Glyma.14G035700 Glycine max HOM05D006179 ORTHO05D008370 3.3e-100 369.0 244 75.0
HanXRQChr13g0390131 Helianthus annuus HOM05D006179 ORTHO05D008370 1.2e-99 367.1 227 75.3
LjContig00564g0004002 Lotus japonicus HOM05D006179 ORTHO05D008370 2.1e-99 366.3 272 69.1
Sopen12g034430 Solanum pennellii HOM05D006179 ORTHO05D008370 2.1e-99 366.3 233 76.4
VMungo0647G1137 Vigna mungo HOM05D006179 ORTHO05D008370 2.1e-99 366.3 243 75.3
Nitab4.5_0001290g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 3.6e-99 365.5 228 77.2
Solyc12g099800.2 Solanum lycopersicum HOM05D006179 ORTHO05D008370 3.6e-99 365.5 233 76.4
SGA_v2.0_scaffold8G04541 Striga asiatica HOM05D006179 ORTHO05D008370 3.6e-99 365.5 232 76.3
Nn2g14782 Nelumbo nucifera HOM05D006179 ORTHO05D008370 6.2e-99 364.8 305 63.6
Gorai.001G135100 Gossypium raimondii HOM05D006179 ORTHO05D008370 8.1e-99 364.4 225 77.3
PGSC0003DMG401004716 Solanum tuberosum HOM05D006179 ORTHO05D008370 1.1e-98 364.0 233 75.5
TPR.G16411 Trifolium pratense HOM05D006179 ORTHO05D008370 1.4e-98 363.6 238 73.5
Cc00_g17410 Coffea canephora HOM05D006179 ORTHO05D008370 1.8e-98 363.2 233 74.2
SalBow6G4024 Salvia bowleyana HOM05D006179 ORTHO05D008370 2.4e-98 362.8 221 77.4
TWI31G1173 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 2.4e-98 362.8 288 64.6
Migut.D00669 Erythranthe guttata HOM05D006179 ORTHO05D008370 3.1e-98 362.5 237 73.8
arahy.Tifrunner.gnm1.ann1.66DN5N Arachis hypogaea HOM05D006179 ORTHO05D008370 5.3e-98 361.7 252 71.4
Haze_23248 Corylus avellana HOM05D006179 ORTHO05D008370 2.6e-97 359.4 271 66.4
Oeu061700.1 Olea europaea HOM05D006179 ORTHO05D008370 4.4e-97 358.6 228 75.9
Phvul.008G201800 Phaseolus vulgaris HOM05D006179 ORTHO05D008370 4.4e-97 358.6 274 66.4
Ca_06199_v3 Cicer arietinum L. HOM05D006179 ORTHO05D008370 5.8e-97 358.2 227 74.9
PSO339G0647 Papaver somniferum HOM05D006179 ORTHO05D008370 5.8e-97 358.2 222 74.8
Rhsim01G0195300 Rhododendron simsii HOM05D006179 ORTHO05D008370 5.8e-97 358.2 242 70.7
TWI79G0794 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 1.3e-96 357.1 293 64.2
Aqoxy1G00395 Aquilegia oxysepala HOM05D006179 ORTHO05D008370 1.7e-96 356.7 221 75.1
PSO384G2846 Papaver somniferum HOM05D006179 ORTHO05D008370 1.7e-96 356.7 222 74.3
Psat2g020720 Pisum sativum HOM05D006179 ORTHO05D008370 1.7e-96 356.7 295 62.4
arahy.Tifrunner.gnm1.ann1.0RM1GA Arachis hypogaea HOM05D006179 ORTHO05D008370 2.2e-96 356.3 258 70.2
Sabra09G0052200 Salix brachista HOM05D006179 ORTHO05D008370 6.4e-96 354.8 344 57.0
Sc16g0011000 Simmondsia chinensis HOM05D006179 ORTHO05D008370 6.4e-96 354.8 221 75.1
EL10Ac4g10106 Beta vulgaris HOM05D006179 ORTHO05D008370 1.1e-95 354.0 220 75.0
Lj2C622G16 Lonicera japonica HOM05D006179 ORTHO05D008370 1.1e-95 354.0 274 65.3
Os07g0687500 Oryza sativa ssp. japonica HOM05D006179 ORTHO05D008370 1.1e-95 354.0 281 64.8
vmacro14276 Vaccinium macrocarpon HOM05D006179 ORTHO05D008370 1.1e-95 354.0 223 74.0
CDE02G1620 Ceratophyllum demersum HOM05D006179 ORTHO05D008370 2.4e-95 352.8 283 63.6
Hund21973 Selenicereus undatus HOM05D006179 ORTHO05D008370 5.4e-95 351.7 234 70.9
CAN.G1305.17 Capsicum annuum HOM05D006179 ORTHO05D008370 1.3e-93 347.1 234 70.5
Ah.04g159740 Amaranthus hybridus HOM05D006179 ORTHO05D008370 5.1e-93 345.1 218 73.4
AUR62000204 Chenopodium quinoa HOM05D006179 ORTHO05D008370 1.1e-92 344.0 220 71.8
Zm00001eb331180 Zea mays HOM05D006179 ORTHO05D008370 1.1e-92 344.0 237 69.2
Cpa.g.sc157.57 Carica papaya HOM05D006179 ORTHO05D008370 4.3e-92 342.0 287 59.9
ATR0621G006 Amborella trichopoda HOM05D006179 ORTHO05D008370 2.1e-91 339.7 220 70.5
unitig_62.g23875 Utricularia gibba HOM05D006179 ORTHO05D008370 2.8e-91 339.3 221 73.3
TPR.G16393 Trifolium pratense HOM05D006179 ORTHO05D008370 3.6e-91 339.0 231 69.7
FAN21G1036 Fragaria x ananassa HOM05D006179 ORTHO05D008370 6.2e-91 338.2 271 66.4
Nn7g36750 Nelumbo nucifera HOM05D006179 ORTHO05D008370 8.1e-91 337.8 221 72.9
Atru.chr3.2952 Acer truncatum HOM05D006179 ORTHO05D008370 1.4e-90 337.0 272 64.3
Duzib170G0239 Durio zibethinus HOM05D006179 ORTHO05D008370 2.4e-90 336.3 305 60.3
Peaxi162Scf00272g00828 Petunia axillaris HOM05D006179 ORTHO05D008370 2.4e-90 336.3 201 77.1
AUR62006552 Chenopodium quinoa HOM05D006179 ORTHO05D008370 4.0e-90 335.5 231 67.5
FAN11G2659 Fragaria x ananassa HOM05D000059 ORTHO05D008370 1.3e-88 330.5 267 66.7
THA.LOC104811194 Tarenaya hassleriana HOM05D006179 ORTHO05D008370 2.2e-88 329.7 279 60.2
Lsat_1_v5_gn_5_65341 Lactuca sativa HOM05D006179 ORTHO05D008370 1.1e-87 327.4 297 58.9
DCAR_024400 Daucus carota HOM05D006179 ORTHO05D008370 9.3e-87 324.3 229 68.6
CARHR193590 Cardamine hirsuta HOM05D006179 ORTHO05D008370 7.9e-86 321.2 289 58.5
Aa31LG1G8830 Aethionema arabicum HOM05D006179 ORTHO05D008370 3.0e-85 319.3 257 63.4
BcaB01g04864 Brassica carinata HOM05D006179 ORTHO05D008370 1.5e-84 317.0 227 68.3
A03p09460 Brassica napus HOM05D006179 ORTHO05D008370 3.3e-84 315.8 300 57.0
BraA03t10264Z Brassica rapa HOM05D006179 ORTHO05D008370 3.3e-84 315.8 300 57.0
Sp6g25040 Schrenkiella parvula HOM05D006179 ORTHO05D008370 3.3e-84 315.8 288 57.3
AL6G30860 Arabidopsis lyrata HOM05D006179 ORTHO05D008370 5.6e-84 315.1 294 56.8
C03p11040 Brassica napus HOM05D006179 ORTHO05D008370 1.3e-83 313.9 304 56.6
Thhalv10014227m.g Eutrema salsugineum HOM05D006179 ORTHO05D008370 1.6e-83 313.5 288 57.3
BolC3t13573H Brassica oleracea HOM05D006179 ORTHO05D008370 3.7e-83 312.4 227 67.8
AT5G19370 Arabidopsis thaliana HOM05D006179 ORTHO05D008370 6.2e-83 311.6 289 56.1
BcaC03g13669 Brassica carinata HOM05D006179 ORTHO05D008370 5.8e-81 305.1 291 55.0
Carub.0006s1771 Capsella rubella HOM05D006179 ORTHO05D008370 5.8e-81 305.1 289 56.7
A02p05510 Brassica napus HOM05D006179 ORTHO05D008370 7.6e-81 304.7 297 55.6
Nitab4.5_0002310g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 1.4e-79 300.4 270 61.1
HPP92_028459 Vanilla planifolia HOM05D006179 ORTHO05D008370 3.2e-79 299.3 182 76.4
BraA02t05502Z Brassica rapa HOM05D006179 ORTHO05D008370 1.0e-77 294.3 322 51.9
BNapus_Darmor_BZH_scaffold_38p02550 Brassica napus HOM05D006179 ORTHO05D008370 1.5e-76 290.4 282 53.9
SMO145G0007 Selaginella moellendorffii HOM05D006179 ORTHO05D008370 3.3e-76 289.3 229 61.1
Mapoly0003s0043 Marchantia polymorpha HOM05D006179 ORTHO05D008370 2.4e-74 283.1 234 59.8
Pp3c3_13280 Physcomitrium patens HOM05D006179 ORTHO05D008370 1.3e-72 277.3 243 55.6
AagrBONN_evm.TU.Sc2ySwM_117.3174 Anthoceros agrestis HOM05D006179 ORTHO05D008370 9.3e-71 271.2 267 50.9
BcaB01g05143 Brassica carinata HOM05D006179 ORTHO05D008370 3.0e-69 266.2 179 70.4
Dinv36157 Davidia involucrata HOM05D006179 ORTHO05D008370 8.7e-69 264.6 224 65.6
CBR_g54969 Chara braunii HOM05D006179 ORTHO05D008370 1.5e-68 263.8 246 56.5
Ciclev10017644m.g Citrus clementina HOM05D006179 ORTHO05D008370 3.7e-67 259.2 151 80.1
Eucgr.J00687 Eucalyptus grandis HOM05D006179 ORTHO05D008370 1.1e-66 257.7 151 78.1
ECA233G4787 Erigeron canadensis HOM05D006179 ORTHO05D008370 8.5e-64 248.1 143 79.7
Manes.02G138400 Manihot esculenta HOM05D006179 ORTHO05D008370 5.5e-63 245.4 217 62.7
Peaxi162Scf00174g00223 Petunia axillaris HOM05D006179 ORTHO05D008370 1.1e-55 221.1 152 69.7
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 5.5e-55 218.8 167 65.9
SEGI_16296 Sequoiadendron giganteum HOM05D006179 ORTHO05D008370 7.2e-55 218.4 140 72.9
AUR62040469 Chenopodium quinoa HOM05D006179 ORTHO05D008370 3.9e-53 212.6 147 68.0
AUR62037598 Chenopodium quinoa HOM05D006179 ORTHO05D007344 7.2e-47 191.8 142 66.2
AUR62042212 Chenopodium quinoa HOM05D006179 ORTHO05D008370 1.5e-39 167.5 137 62.8
MCO13G336 Micromonas commoda HOM05D006179 ORTHO05D008370 1.3e-35 154.5 198 41.9
Cre07.g350400 Chlamydomonas reinhardtii HOM05D006179 ORTHO05D008370 2.8e-35 153.3 185 37.3
SalBow6G2129 Salvia bowleyana HOM05D006179 ORTHO05D353266 4.7e-30 136.0 138 55.1
CSS0040024 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 8.0e-22 108.6 68 75.0
CSS0040434 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 1.1e-15 88.2 137 39.4
MCO16G521 Micromonas commoda HOM05D005637 ORTHO05D006983 3.2e-10 70.1 103 41.7
QL02p019212 Quercus lobata HOM05D006179 ORTHO05D008370 7.3e-07 58.9 35 65.7
C03p72380 Brassica napus HOM05D005637 ORTHO05D006983 1.2e-06 58.2 68 42.6
BolC3t19533H Brassica oleracea HOM05D005637 ORTHO05D006983 1.2e-06 58.2 68 42.6
Haze_26617 Corylus avellana HOM05D006179 ORTHO05D164269 1.2e-06 58.2 96 37.5
Aqoxy3G03463 Aquilegia oxysepala HOM05D005637 ORTHO05D006983 4.7e-06 56.2 67 41.8
Atru.chr9.197 Acer truncatum HOM05D005637 ORTHO05D006983 6.2e-06 55.8 67 40.3
unitig_748.g7812 Utricularia gibba HOM05D005637 ORTHO05D006983 8.0e-06 55.5 67 40.3


User provided reference genes

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