Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005295 Sechium edule HOM05D002660 ORTHO05D003902 3.4e-258 894.4 437 100.0
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 1.0e-52 211.8 228 49.1
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 1.0e-52 211.8 228 49.1
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 1.0e-52 211.8 228 49.1
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.0e-52 211.8 228 49.1
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 1.7e-52 211.1 228 49.1
COL.COLO4_02507 Corchorus olitorius HOM05D002660 ORTHO05D003902 3.0e-36 157.1 190 44.7
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 5.6e-35 152.9 227 39.6
SGA_v2.0_scaffold420G51340 Striga asiatica HOM05D002660 ORTHO05D003902 1.8e-28 131.3 233 36.5
BcaC05g26896 Brassica carinata HOM05D002660 ORTHO05D003902 1.9e-27 127.9 449 28.5
Cpa.g.sc263.8 Carica papaya HOM05D002660 ORTHO05D003902 2.1e-26 124.4 147 46.3
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.4e-25 121.7 228 34.6
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.4e-25 121.7 228 34.6
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.4e-25 121.7 228 34.6
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.4e-25 121.7 228 34.6
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 1.8e-25 121.3 228 34.6
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 3.4e-24 117.1 124 47.6
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 8.4e-23 112.5 228 33.8
arahy.Tifrunner.gnm1.ann1.DD5JWP Arachis hypogaea HOM05D002660 ORTHO05D003902 1.6e-21 108.2 219 36.5
SGA_v2.0_scaffold400G50856 Striga asiatica HOM05D002660 ORTHO05D003902 1.6e-21 108.2 97 56.7
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 4.6e-21 106.7 233 32.6
Sopen05g012700 Solanum pennellii HOM05D002660 ORTHO05D000001 4.6e-21 106.7 214 35.5
arahy.Tifrunner.gnm1.ann1.RJKU2P Arachis hypogaea HOM05D002660 ORTHO05D003902 7.9e-21 105.9 221 37.1
arahy.Tifrunner.gnm1.ann1.MHP2RT Arachis hypogaea HOM05D002660 ORTHO05D003902 1.3e-20 105.1 221 37.1
RcHm_v2.0_MTg0498601 Rosa chinensis HOM05D002660 ORTHO05D003902 1.8e-20 104.8 182 36.8
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 2.3e-20 104.4 107 49.5
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 2.3e-20 104.4 107 49.5
unitig_87.g28008 Utricularia gibba HOM05D002660 ORTHO05D003902 3.9e-20 103.6 137 46.0
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 5.1e-20 103.2 108 48.1
arahy.Tifrunner.gnm1.ann1.64IP8W Arachis hypogaea HOM05D002660 ORTHO05D003902 1.5e-19 101.7 156 43.6
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 1.5e-19 101.7 229 33.2
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 1.5e-19 101.7 229 33.2
BcaC08g43707 Brassica carinata HOM05D002660 ORTHO05D003902 2.5e-19 100.9 107 49.5
BNapus_Darmor_BZH_scaffold_234p00270 Brassica napus HOM05D002660 ORTHO05D003902 2.5e-19 100.9 107 49.5
BolSC28t60340H Brassica oleracea HOM05D002660 ORTHO05D003902 2.5e-19 100.9 107 49.5
BraSC177t45771Z Brassica rapa HOM05D002660 ORTHO05D003902 2.5e-19 100.9 107 49.5
BraSC48t46265Z Brassica rapa HOM05D002660 ORTHO05D003902 2.5e-19 100.9 107 49.5
arahy.Tifrunner.gnm1.ann1.4WR8AK Arachis hypogaea HOM05D002660 ORTHO05D003902 5.7e-19 99.8 112 51.8
BolC6t36210H Brassica oleracea HOM05D002660 ORTHO05D003902 1.3e-18 98.6 107 48.6
CsaV3_UNG207980 Cucumis sativus L. HOM05D002660 ORTHO05D003902 1.6e-18 98.2 118 45.8
SGA_v2.0_scaffold255G45438 Striga asiatica HOM05D002660 ORTHO05D003902 2.8e-18 97.4 89 53.9
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 3.7e-18 97.1 108 49.1
ATR0502G001 Amborella trichopoda HOM05D002660 ORTHO05D003902 3.1e-17 94.0 213 30.5
SabraMtG0005500 Salix brachista HOM05D002660 ORTHO05D003902 3.1e-17 94.0 175 33.7
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 4.1e-17 93.6 216 31.5
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 2.0e-16 91.3 144 39.6
Solyc11g063530.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.0e-16 91.3 90 50.0
CAN.G85.19 Capsicum annuum HOM05D002660 ORTHO05D003902 2.6e-16 90.9 96 46.9
arahy.Tifrunner.gnm1.ann1.1F9GAV Arachis hypogaea HOM05D002660 ORTHO05D003902 3.4e-16 90.5 111 49.5
Aa31csc553G40 Aethionema arabicum HOM05D015026 ORTHO05D015810 1.0e-15 89.0 172 34.9
Aa31csc1168G10 Aethionema arabicum HOM05D002660 ORTHO05D003902 3.2e-14 84.0 98 46.9
arahy.Tifrunner.gnm1.ann1.PGW3V5 Arachis hypogaea HOM05D002660 ORTHO05D003902 4.6e-13 80.1 129 40.3
arahy.Tifrunner.gnm1.ann1.UMNW15 Arachis hypogaea HOM05D002660 ORTHO05D003902 4.6e-13 80.1 129 40.3
Lj2P1228T81 Lonicera japonica HOM05D011380 ORTHO05D019448 6.1e-13 79.7 87 46.0
ATR0575G001 Amborella trichopoda HOM05D002660 ORTHO05D003902 7.9e-13 79.3 142 35.9
COL.COLO4_04088 Corchorus olitorius HOM05D002660 ORTHO05D003902 8.8e-12 75.9 83 45.8
SGA_v2.0_scaffold507G52551 Striga asiatica HOM05D002660 ORTHO05D003902 1.1e-11 75.5 52 61.5
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 5.7e-11 73.2 87 46.0
Cpa.g.sc263.18 Carica papaya HOM05D002660 ORTHO05D003902 9.7e-11 72.4 115 33.0
Lj2A1234T113 Lonicera japonica HOM05D002660 ORTHO05D003902 1.3e-10 72.0 84 44.0
Lsat_1_v5_gn_8_93880 Lactuca sativa HOM05D002660 ORTHO05D013121 3.7e-10 70.5 141 31.2
Potri.007G061741 Populus trichocarpa HOM05D023423 ORTHO05D010514 6.3e-10 69.7 196 29.6
ATR0661G179 Amborella trichopoda HOM05D002660 ORTHO05D003902 1.4e-09 68.6 72 51.4
BcaC05g27131 Brassica carinata HOM05D002660 ORTHO05D003902 1.8e-09 68.2 106 39.6
Dinv06709 Davidia involucrata HOM05D002660 ORTHO05D013121 1.8e-09 68.2 115 34.8
Medtr0212s0050 Medicago truncatula HOM05D002660 ORTHO05D003902 2.4e-09 67.8 208 28.8
vmacro00721 Vaccinium macrocarpon HOM05D005420 ORTHO05D006524 2.4e-09 67.8 67 47.8
Ca_08791_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 9.1e-09 65.9 196 29.1
SalBow1G8110 Salvia bowleyana HOM05D002660 ORTHO05D003902 2.0e-08 64.7 212 30.7
Nn1g10106 Nelumbo nucifera HOM05D002660 ORTHO05D003902 2.6e-08 64.3 81 46.9
Nn1g10197 Nelumbo nucifera HOM05D002660 ORTHO05D003902 2.6e-08 64.3 81 46.9
Sopen11g018230 Solanum pennellii HOM05D002660 ORTHO05D003902 2.6e-08 64.3 82 39.0
GSVIVG01029663001 Vitis vinifera HOM05D002660 ORTHO05D003902 5.9e-08 63.2 70 47.1
MBI05_g05343_MAGBIO Magnolia biondii HOM05D000445 ORTHO05D000314 7.7e-08 62.8 70 45.7
SGA_v2.0_scaffold420G51422 Striga asiatica HOM05D002660 ORTHO05D019448 1.3e-07 62.0 59 54.2
arahy.Tifrunner.gnm1.ann1.FFDS4S Arachis hypogaea HOM05D002660 ORTHO05D003902 1.7e-07 61.6 82 40.2
SabraMtG0003800 Salix brachista HOM05D023423 ORTHO05D010514 1.7e-07 61.6 197 28.9
Gohir.A06G098104 Gossypium hirsutum HOM05D002660 ORTHO05D003902 2.9e-07 60.8 53 56.6
ATMG01410 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 3.8e-07 60.5 68 44.1
MBI14_g38700_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 3.8e-07 60.5 91 38.5
CAN.G72.10 Capsicum annuum HOM05D002660 ORTHO05D003902 5.0e-07 60.1 65 46.2
CARHR283370 Cardamine hirsuta HOM05D002660 ORTHO05D003902 1.4e-06 58.5 71 46.5
PGSC0003DMG400006470 Solanum tuberosum HOM05D002660 ORTHO05D003902 1.4e-06 58.5 87 40.2
ATMG01110 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 1.9e-06 58.2 71 46.5
Ca_26184_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 1.9e-06 58.2 208 26.9
COL.COLO4_00533 Corchorus olitorius HOM05D015026 ORTHO05D015810 1.9e-06 58.2 101 38.6
Lalb_Chr00c24g0406851 Lupinus albus HOM05D002660 ORTHO05D003902 1.9e-06 58.2 40 72.5
Solyc00g500104.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.5e-06 57.8 91 38.5
Solyc11g063540.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.5e-06 57.8 91 38.5
arahy.Tifrunner.gnm1.ann1.2INJ5A Arachis hypogaea HOM05D002660 ORTHO05D003902 3.2e-06 57.4 82 37.8
CAN.G505.14 Capsicum annuum HOM05D000743 ORTHO05D000580 3.2e-06 57.4 71 42.3
SGA_v2.0_scaffold400G50852 Striga asiatica HOM05D000388 ORTHO05D000473 3.2e-06 57.4 156 28.8
Lalb_Chr00c24g0406811 Lupinus albus HOM05D002660 ORTHO05D003902 7.2e-06 56.2 70 47.1


User provided reference genes

Program Settings