Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005258 Sechium edule HOM05D003146 ORTHO05D001819 6.6e-148 527.3 262 100.0
MELO3C019686.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.6e-24 117.5 229 34.9
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 5.1e-23 112.5 308 28.6
ClCG09G008860 Citrullus lanatus HOM05D003146 ORTHO05D001819 6.6e-23 112.1 135 45.9
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 5.6e-22 109.0 243 32.9
CsaV3_2G000020 Cucumis sativus L. HOM05D003146 ORTHO05D001819 9.9e-19 98.2 137 41.6
MELO3C001272.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.7e-18 97.4 135 40.7
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.7e-18 97.4 112 45.5
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.7e-18 97.4 112 45.5
MELO3C030067.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.2e-18 97.1 135 40.7
MELO3C027589.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.9e-18 96.7 132 40.2
MELO3C001332.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.8e-18 96.3 135 40.0
MELO3C028122.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.8e-18 96.3 135 40.0
CsaV3_4G038000 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.8e-18 96.3 137 41.6
CsaV3_6G023780 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.8e-18 96.3 137 41.6
CsaV3_UNG007100 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.8e-18 96.3 137 41.6
CsaV3_UNG217460 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.8e-18 96.3 137 41.6
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.8e-18 96.3 137 41.6
CsaV3_UNG235420 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.8e-18 96.3 137 41.6
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.9e-18 95.9 129 40.3
MELO3C000722.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.4e-18 95.5 132 40.2
MELO3C019860.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.4e-17 94.4 132 37.1
MELO3C030065.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.4e-17 94.4 132 38.6
CsaV3_6G020170 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.9e-17 94.0 271 29.9
MELO3C000387.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.4e-17 93.6 135 37.8
MELO3C019864.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.4e-17 93.6 135 39.3
MELO3C028017.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.4e-17 93.6 132 40.2
MELO3C032417.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.2e-17 93.2 135 39.3
MELO3C034829.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.2e-17 93.2 132 40.2
CsaV3_6G026320 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.2e-17 93.2 137 40.9
CsaV3_6G026340 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.2e-17 93.2 137 40.9
CsaV3_6G027350 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.2e-17 93.2 137 40.9
MELO3C034932.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.1e-17 92.0 128 39.8
CsaV3_6G022330 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.2e-16 91.3 133 39.1
CsaV3_6G021230 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.6e-16 90.9 116 43.1
MELO3C027590.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.1e-16 90.5 112 42.9
MELO3C030064.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.7e-16 90.1 135 37.8
MELO3C028053.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.5e-16 89.7 106 43.4
MELO3C032509.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.5e-16 89.7 133 39.8
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.6e-16 89.4 132 37.1
MELO3C019866.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.0e-16 89.0 132 37.1
MELO3C027398.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.0e-16 89.0 128 39.1
MELO3C000643.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.8e-16 88.6 132 35.6
MELO3C027265.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.0e-15 88.2 128 37.5
MELO3C034867.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.0e-15 88.2 135 40.0
MELO3C030077.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.7e-15 87.4 135 38.5
MELO3C027585.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.3e-15 87.0 128 35.9
MELO3C030062.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.3e-15 87.0 111 44.1
MELO3C027044.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.1e-15 85.9 135 39.3
ClCG11G011230 Citrullus lanatus HOM05D003146 ORTHO05D001819 6.6e-15 85.5 234 29.9
MELO3C027828.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.1e-14 84.7 124 37.9
MELO3C030075.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.3e-14 83.2 105 40.0
MELO3C028113.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.3e-14 82.0 96 46.9
MELO3C035196.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.6e-13 80.9 138 37.0
ClCG07G004740 Citrullus lanatus HOM05D003146 ORTHO05D001819 4.8e-13 79.3 242 28.5
MELO3C027826.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.1e-13 78.6 84 45.2
Sed0019418 Sechium edule HOM05D003146 ORTHO05D001819 1.8e-12 77.4 137 37.2
Sed0022729 Sechium edule HOM05D003146 ORTHO05D001819 6.9e-12 75.5 108 40.7
Sed0025474 Sechium edule HOM05D003146 ORTHO05D001819 6.9e-12 75.5 110 37.3
MELO3C021270.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.2e-11 74.7 127 39.4
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 4.4e-11 72.8 107 37.4
CsaV3_UNG044260 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.7e-10 70.9 100 41.0
CsaV3_UNG083670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.7e-10 70.9 100 41.0
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 2.2e-10 70.5 104 36.5
CsaV3_6G022340 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.2e-10 70.5 107 34.6
MELO3C027625.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.9e-10 70.1 84 41.7
Peaxi162Scf00089g00132 Petunia axillaris HOM05D003146 ORTHO05D001819 1.1e-09 68.2 285 22.5
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 1.9e-09 67.4 105 39.0
MELO3C028207.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.4e-09 67.0 103 40.8
MELO3C034865.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.4e-09 67.0 106 38.7
Actinidia18487 Actinidia chinensis HOM05D003146 ORTHO05D001819 3.2e-09 66.6 98 39.8
MELO3C001749.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.1e-09 65.5 86 41.9
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 7.1e-09 65.5 131 32.1
PGR004G1752 Punica granatum HOM05D003146 ORTHO05D001819 9.3e-09 65.1 110 32.7
CsaV3_6G020190 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.2e-08 64.7 69 44.9
CsaV3_6G020220 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.2e-08 64.7 69 44.9
CsaV3_6G021250 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.2e-08 64.7 69 44.9
MELO3C034826.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.7e-08 63.5 89 42.7
CsaV3_6G021220 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.0e-08 62.4 68 44.1
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 7.8e-08 62.0 137 29.2
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 1.3e-07 61.2 102 32.4
Lalb_Chr22g0349691 Lupinus albus HOM05D003146 ORTHO05D001819 1.7e-07 60.8 108 32.4
TWI09G0175 Tripterygium wilfordii HOM05D003146 ORTHO05D001819 2.3e-07 60.5 139 30.9
Hma1.2p1_3273F.1_g334810 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 1.5e-06 57.8 96 31.2
Hma1.2p1_3469F.1_g336200 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 1.5e-06 57.8 96 31.2
vmacro07979 Vaccinium macrocarpon HOM05D003146 ORTHO05D001819 1.9e-06 57.4 104 40.4
MELO3C034823.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.3e-06 56.6 81 42.0
Hma1.2p1_1096F.1_g256660 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 3.3e-06 56.6 129 34.1
Solyc09g072950.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 5.6e-06 55.8 105 31.4


User provided reference genes

Program Settings