Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005208 Sechium edule HOM05D004579 ORTHO05D005376 1.2e-130 469.9 261 100.0
Sed0027918 Sechium edule HOM05D004579 ORTHO05D005376 1.4e-97 360.1 255 83.5
ClCG06G000280 Citrullus lanatus HOM05D004579 ORTHO05D005376 1.8e-97 359.8 255 77.6
MELO3C022510.2 Cucumis melo HOM05D004579 ORTHO05D005376 3.4e-96 355.5 258 77.1
CsaV3_6G006070 Cucumis sativus L. HOM05D004579 ORTHO05D005376 1.1e-91 340.5 255 75.3
CiPaw.15G041800 Carya illinoinensis HOM05D004579 ORTHO05D005376 3.5e-56 222.6 258 52.7
Glyma.04G049800 Glycine max HOM05D004579 ORTHO05D005376 5.9e-56 221.9 255 52.2
TPR.G13109 Trifolium pratense HOM05D004579 ORTHO05D005376 1.0e-55 221.1 251 56.2
Dinv23423 Davidia involucrata HOM05D004579 ORTHO05D005376 2.2e-55 219.9 257 51.8
Cfa017933 Carpinus fangiana HOM05D004579 ORTHO05D005376 6.5e-55 218.4 253 51.0
Duzib168G1792 Durio zibethinus HOM05D004579 ORTHO05D005376 6.5e-55 218.4 255 50.6
Manes.03G046600 Manihot esculenta HOM05D004579 ORTHO05D005376 1.1e-54 217.6 259 51.0
CANSAT25G0619 Cannabis sativa HOM05D004579 ORTHO05D005376 5.5e-54 215.3 259 53.7
Duzib187G0056 Durio zibethinus HOM05D004579 ORTHO05D005376 7.2e-54 214.9 253 52.2
Prupe.1G414900 Prunus persica HOM05D004579 ORTHO05D005376 2.7e-53 213.0 260 50.0
QL07p000612 Quercus lobata HOM05D004579 ORTHO05D005376 2.7e-53 213.0 253 51.4
Phvul.009G076200 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 1.4e-52 210.7 257 49.4
Glyma.06G050800 Glycine max HOM05D004579 ORTHO05D005376 1.8e-52 210.3 255 50.6
CSS0030937 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 4.0e-52 209.1 263 47.1
QL02p103256 Quercus lobata HOM05D004579 ORTHO05D005376 5.2e-52 208.8 252 50.8
Lj1g0026801 Lotus japonicus HOM05D004579 ORTHO05D005376 6.8e-52 208.4 276 49.3
Sabra06G0181300 Salix brachista HOM05D004579 ORTHO05D005376 1.5e-51 207.2 272 52.2
Hma1.2p1_1266F.1_g271430 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 2.0e-51 206.8 254 48.8
Potri.006G232800 Populus trichocarpa HOM05D004579 ORTHO05D005376 2.0e-51 206.8 267 52.4
Thecc.09G051200 Theobroma cacao HOM05D004579 ORTHO05D005376 3.4e-51 206.1 255 51.4
Atru.chr7.2020 Acer truncatum HOM05D004579 ORTHO05D005376 1.7e-50 203.8 259 50.6
Glyma.14G092900 Glycine max HOM05D004579 ORTHO05D005376 2.8e-50 203.0 256 51.6
Manes.16G077900 Manihot esculenta HOM05D004579 ORTHO05D005376 3.7e-50 202.6 266 50.0
Medtr1g016630 Medicago truncatula HOM05D004579 ORTHO05D005376 6.3e-50 201.8 267 47.6
Lalb_Chr22g0355991 Lupinus albus HOM05D004579 ORTHO05D005376 8.3e-50 201.4 258 49.2
PGR031G0410 Punica granatum HOM05D004579 ORTHO05D005376 2.4e-49 199.9 243 50.2
Gohir.D05G045500 Gossypium hirsutum HOM05D004579 ORTHO05D005376 3.1e-49 199.5 255 50.6
VMungo0647G1140 Vigna mungo HOM05D004579 ORTHO05D005376 3.1e-49 199.5 260 47.7
Lalb_Chr24g0399591 Lupinus albus HOM05D004579 ORTHO05D005376 4.1e-49 199.1 254 50.8
Ca_02416_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 5.4e-49 198.7 263 49.8
TWI34G1837 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 7.0e-49 198.4 246 52.4
Psat6g019640 Pisum sativum HOM05D004579 ORTHO05D005376 1.6e-48 197.2 261 49.0
GSVIVG01035344001 Vitis vinifera HOM05D004579 ORTHO05D005376 1.6e-48 197.2 215 54.4
Ca_15870_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 2.0e-48 196.8 270 47.0
Eucgr.C00634 Eucalyptus grandis HOM05D004579 ORTHO05D005376 2.0e-48 196.8 254 53.5
Gorai.009G046700 Gossypium raimondii HOM05D004579 ORTHO05D005376 3.5e-48 196.1 244 51.2
TAR383G0831 Trochodendron aralioides HOM05D004579 ORTHO05D005376 5.9e-48 195.3 256 46.1
Dinv27966 Davidia involucrata HOM05D004579 ORTHO05D005376 7.7e-48 194.9 242 46.7
Gorai.001G023600 Gossypium raimondii HOM05D004579 ORTHO05D005376 1.3e-47 194.1 256 45.7
Psat5g036520 Pisum sativum HOM05D004579 ORTHO05D005376 1.3e-47 194.1 253 47.0
Gohir.A05G043900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 1.7e-47 193.7 278 47.1
arahy.Tifrunner.gnm1.ann1.C5JVH4 Arachis hypogaea HOM05D004579 ORTHO05D005376 5.0e-47 192.2 261 46.0
Cc08_g10350 Coffea canephora HOM05D004579 ORTHO05D005376 5.0e-47 192.2 258 47.3
Gohir.D07G022900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 5.0e-47 192.2 256 45.3
FvH4_2g32180 Fragaria vesca HOM05D004579 ORTHO05D005376 8.5e-47 191.4 261 48.7
TWI63G0708 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 1.1e-46 191.0 245 51.4
Nn8g38954 Nelumbo nucifera HOM05D004579 ORTHO05D005376 1.5e-46 190.7 253 43.9
FAN24G0041 Fragaria x ananassa HOM05D004579 ORTHO05D005376 1.9e-46 190.3 261 47.5
HanXRQChr08g0226451 Helianthus annuus HOM05D004579 ORTHO05D005376 2.5e-46 189.9 255 46.3
HanXRQChr08g0226601 Helianthus annuus HOM05D004579 ORTHO05D005376 2.5e-46 189.9 255 46.3
Lsat_1_v5_gn_6_7421 Lactuca sativa HOM05D004579 ORTHO05D005376 4.2e-46 189.1 258 45.3
VMungo1309G2710 Vigna mungo HOM05D004579 ORTHO05D005376 4.2e-46 189.1 260 48.8
Nitab4.5_0000359g0090 Nicotiana tabacum HOM05D004579 ORTHO05D005376 5.5e-46 188.7 244 45.9
arahy.Tifrunner.gnm1.ann1.A3GFYF Arachis hypogaea HOM05D004579 ORTHO05D005376 9.4e-46 188.0 265 46.8
arahy.Tifrunner.gnm1.ann1.Y2NPND Arachis hypogaea HOM05D004579 ORTHO05D005376 1.2e-45 187.6 265 46.4
Haze_18215 Corylus avellana HOM05D004579 ORTHO05D005376 1.2e-45 187.6 316 42.1
Actinidia14703 Actinidia chinensis HOM05D004579 ORTHO05D005376 2.1e-45 186.8 179 53.6
FAN15G2153 Fragaria x ananassa HOM05D004579 ORTHO05D005376 4.7e-45 185.7 265 47.5
COL.COLO4_21028 Corchorus olitorius HOM05D004579 ORTHO05D005376 6.1e-45 185.3 251 47.4
FAN20G3218 Fragaria x ananassa HOM05D004579 ORTHO05D005376 6.1e-45 185.3 262 47.7
SGA_v2.0_scaffold88G27218 Striga asiatica HOM05D004579 ORTHO05D005376 6.1e-45 185.3 254 44.9
Peaxi162Scf00436g00719 Petunia axillaris HOM05D004579 ORTHO05D005376 8.0e-45 184.9 258 45.7
unitig_736.g22340 Utricularia gibba HOM05D004579 ORTHO05D005376 8.0e-45 184.9 255 42.4
arahy.Tifrunner.gnm1.ann1.XC2JTE Arachis hypogaea HOM05D004579 ORTHO05D005376 1.4e-44 184.1 258 45.7
Rhsim07G0143600 Rhododendron simsii HOM05D004579 ORTHO05D005376 1.4e-44 184.1 274 45.6
MSTRG.11672 Avicennia marina HOM05D004579 ORTHO05D005376 1.8e-44 183.7 256 47.3
FAN27G3258 Fragaria x ananassa HOM05D004579 ORTHO05D005376 1.8e-44 183.7 267 47.9
Lj5g0003794 Lotus japonicus HOM05D004579 ORTHO05D005376 4.0e-44 182.6 240 48.8
Nitab4.5_0006174g0020 Nicotiana tabacum HOM05D004579 ORTHO05D005376 5.2e-44 182.2 243 44.9
Nitab4.5_0008290g0030 Nicotiana tabacum HOM05D004579 ORTHO05D005376 5.2e-44 182.2 246 44.3
MBI01_g16584_MAGBIO Magnolia biondii HOM05D004579 ORTHO05D005376 6.8e-44 181.8 265 43.4
Gohir.A07G022140 Gossypium hirsutum HOM05D004579 ORTHO05D005376 8.8e-44 181.4 224 48.2
SalBow4G3199 Salvia bowleyana HOM05D004579 ORTHO05D005376 1.2e-43 181.0 250 45.6
CAN.G1226.13 Capsicum annuum HOM05D004579 ORTHO05D005376 3.4e-43 179.5 261 43.7
BraA05t21726Z Brassica rapa HOM05D004579 ORTHO05D005376 4.4e-43 179.1 257 43.6
Ciclev10009210m.g Citrus clementina HOM05D004579 ORTHO05D005376 5.7e-43 178.7 264 48.1
PGR142G1482 Punica granatum HOM05D004579 ORTHO05D005376 1.7e-42 177.2 215 48.4
HanXRQChr09g0251171 Helianthus annuus HOM05D004579 ORTHO05D005376 2.8e-42 176.4 226 49.6
BcaC05g28330 Brassica carinata HOM05D004579 ORTHO05D005376 3.7e-42 176.0 265 43.8
Sc09g0009680 Simmondsia chinensis HOM05D004579 ORTHO05D005376 3.7e-42 176.0 258 45.0
PGSC0003DMG400005151 Solanum tuberosum HOM05D004579 ORTHO05D005376 4.9e-42 175.6 251 47.4
BolC5t33107H Brassica oleracea HOM05D004579 ORTHO05D005376 6.3e-42 175.3 264 43.9
DCAR_019057 Daucus carota HOM05D004579 ORTHO05D005376 1.1e-41 174.5 243 47.3
Sopen04g033940 Solanum pennellii HOM05D004579 ORTHO05D005376 1.1e-41 174.5 245 48.6
A05p28470 Brassica napus HOM05D004579 ORTHO05D005376 1.4e-41 174.1 260 44.2
Solyc04g080350.4 Solanum lycopersicum HOM05D004579 ORTHO05D005376 1.4e-41 174.1 244 47.5
THA.LOC104811250 Tarenaya hassleriana HOM05D004579 ORTHO05D005376 1.4e-41 174.1 177 55.4
C05p43910 Brassica napus HOM05D004579 ORTHO05D005376 1.8e-41 173.7 261 44.8
Thhalv10021403m.g Eutrema salsugineum HOM05D004579 ORTHO05D005376 1.8e-41 173.7 247 46.6
Aqoxy7G00927 Aquilegia oxysepala HOM05D004579 ORTHO05D005376 2.4e-41 173.3 263 43.7
BcaB06g26108 Brassica carinata HOM05D004579 ORTHO05D005376 2.4e-41 173.3 262 43.9
HPP92_014384 Vanilla planifolia HOM05D004579 ORTHO05D005376 4.1e-41 172.6 174 51.1
Hund03357 Selenicereus undatus HOM05D004579 ORTHO05D005376 7.0e-41 171.8 294 40.5
TAR626G1184 Trochodendron aralioides HOM05D004579 ORTHO05D005376 1.2e-40 171.0 201 53.7
AT3G20430 Arabidopsis thaliana HOM05D004579 ORTHO05D005376 2.0e-40 170.2 255 44.7
Oeu037326.2 Olea europaea HOM05D004579 ORTHO05D005376 3.5e-40 169.5 284 41.2
Aa31LG8G7240 Aethionema arabicum HOM05D004579 ORTHO05D005376 4.5e-40 169.1 252 42.9
FAN24G1203 Fragaria x ananassa HOM05D004579 ORTHO05D005376 7.7e-40 168.3 259 43.2
Migut.A00154 Erythranthe guttata HOM05D004579 ORTHO05D005376 1.0e-39 167.9 247 42.5
CARHR096140 Cardamine hirsuta HOM05D004579 ORTHO05D005376 1.1e-38 164.5 248 45.6
EL10Ac2g03929 Beta vulgaris HOM05D004579 ORTHO05D005376 1.5e-38 164.1 251 44.2
AL3G34150 Arabidopsis lyrata HOM05D004579 ORTHO05D005376 5.6e-38 162.2 252 43.3
CDE02G1740 Ceratophyllum demersum HOM05D004579 ORTHO05D005376 5.6e-38 162.2 256 40.6
AUR62022041 Chenopodium quinoa HOM05D004579 ORTHO05D005376 5.6e-38 162.2 177 46.3
Carub.0003s2037 Capsella rubella HOM05D004579 ORTHO05D005376 1.2e-37 161.0 249 43.4
ECA233G0431 Erigeron canadensis HOM05D004579 ORTHO05D005376 1.6e-37 160.6 191 48.7
Sp3g18440 Schrenkiella parvula HOM05D004579 ORTHO05D005376 4.7e-37 159.1 256 43.4
Os01g0559200 Oryza sativa ssp. japonica HOM05D004579 ORTHO05D005376 3.0e-36 156.4 175 46.9
Zm00001eb356770 Zea mays HOM05D004579 ORTHO05D005376 4.0e-36 156.0 200 48.5
Oeu018654.1 Olea europaea HOM05D004579 ORTHO05D005376 2.0e-35 153.7 174 52.3
Nn6g35393 Nelumbo nucifera HOM05D004579 ORTHO05D005376 4.4e-35 152.5 256 42.2
Ah.11g044630 Amaranthus hybridus HOM05D004579 ORTHO05D005376 5.7e-35 152.1 266 40.2
PSO210G6518 Papaver somniferum HOM05D004579 ORTHO05D005376 1.1e-33 147.9 277 36.8
CSS0042880 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 1.4e-33 147.5 153 51.0
ATR0789G072 Amborella trichopoda HOM05D004579 ORTHO05D005376 5.4e-33 145.6 262 38.9
PSO210G6474 Papaver somniferum HOM05D004579 ORTHO05D005376 7.0e-33 145.2 171 46.2
PSO017G1019 Papaver somniferum HOM05D004579 ORTHO05D005376 4.6e-32 142.5 169 46.2
vmacro05280 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 4.3e-30 136.0 374 32.6
MSTRG.25939 Avicennia marina HOM05D004579 ORTHO05D005376 1.2e-29 134.4 138 53.6
TPR.G25353 Trifolium pratense HOM05D004579 ORTHO05D005376 3.6e-29 132.9 137 53.3
RcHm_v2.0_Chr6g0310501 Rosa chinensis HOM05D004579 ORTHO05D005376 1.5e-27 127.5 141 51.1
Hund19474 Selenicereus undatus HOM05D004579 ORTHO05D005376 5.8e-27 125.6 376 32.7
SEGI_10906 Sequoiadendron giganteum HOM05D004579 ORTHO05D005376 2.7e-24 116.7 297 29.6
AagrBONN_evm.TU.Sc2ySwM_117.2939 Anthoceros agrestis HOM05D004579 ORTHO05D005376 1.6e-21 107.5 206 35.0
AUR62009186 Chenopodium quinoa HOM05D004579 ORTHO05D005376 2.8e-21 106.7 139 41.7
Phvul.001G033700 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 1.1e-20 104.8 150 44.7
PSO063G4337 Papaver somniferum HOM05D004579 ORTHO05D005376 2.3e-20 103.6 220 33.6
PGSC0003DMG400032806 Solanum tuberosum HOM05D004579 ORTHO05D005376 9.8e-19 98.2 59 72.9
vmacro00165 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 1.1e-17 94.7 253 36.4
Cpa.g.sc84.21 Carica papaya HOM05D004579 ORTHO05D005376 1.4e-17 94.4 246 36.2
CBR_g36456 Chara braunii HOM05D004579 ORTHO05D005376 1.7e-15 87.4 220 30.9
Mapoly0091s0021 Marchantia polymorpha HOM05D004579 ORTHO05D005376 5.1e-15 85.9 178 34.8
Hma1.2p1_1944F.1_g308530 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 6.6e-15 85.5 147 36.7
arahy.Tifrunner.gnm1.ann1.E1I8FT Arachis hypogaea HOM05D004579 ORTHO05D005376 2.5e-14 83.6 156 40.4
Pp3c10_2240 Physcomitrium patens HOM05D004579 ORTHO05D005376 6.2e-13 79.0 177 33.9
Actinidia18195 Actinidia chinensis HOM05D004579 ORTHO05D005376 1.5e-11 74.3 122 47.5
RcHm_v2.0_Chr6g0310491 Rosa chinensis HOM05D004579 ORTHO05D005376 2.0e-11 73.9 127 41.7
TPR.G25355 Trifolium pratense HOM05D004579 ORTHO05D005376 2.6e-11 73.6 133 44.4
QL03p011522 Quercus lobata HOM05D004579 ORTHO05D005376 2.9e-10 70.1 70 54.3
vmacro00163 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 3.5e-08 63.2 157 33.8
MCO09G383 Micromonas commoda HOM05D004579 ORTHO05D005376 7.3e-06 55.5 92 31.5


User provided reference genes

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