Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 4.1e-99 364.8 189 100.0
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 4.0e-70 268.5 186 76.9
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 7.5e-69 264.2 188 75.5
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 7.5e-69 264.2 187 75.4
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 2.4e-51 206.1 182 62.1
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 3.2e-51 205.7 191 57.6
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 4.1e-51 205.3 134 76.9
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 7.8e-50 201.1 157 68.2
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 1.3e-49 200.3 166 63.9
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 3.0e-49 199.1 131 76.3
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 3.9e-49 198.7 174 63.8
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 3.9e-49 198.7 135 75.6
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 5.1e-49 198.4 143 71.3
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 2.5e-48 196.1 186 63.4
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 2.5e-48 196.1 135 73.3
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 5.6e-48 194.9 147 68.7
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 5.6e-48 194.9 136 74.3
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 9.5e-48 194.1 187 61.0
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 1.2e-47 193.7 172 61.6
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.6e-47 193.4 192 58.9
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 1.6e-47 193.4 162 65.4
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 3.6e-47 192.2 173 63.6
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 4.7e-47 191.8 127 74.8
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 4.7e-47 191.8 139 72.7
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 1.1e-46 190.7 170 61.8
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 1.4e-46 190.3 193 57.0
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 1.4e-46 190.3 124 75.0
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 1.8e-46 189.9 139 69.1
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 1.8e-46 189.9 141 70.2
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 2.4e-46 189.5 123 74.0
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 2.4e-46 189.5 124 75.8
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 2.4e-46 189.5 192 57.3
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 4.0e-46 188.7 135 71.1
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 6.8e-46 188.0 163 62.6
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 1.5e-45 186.8 128 70.3
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 2.0e-45 186.4 184 58.7
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 2.0e-45 186.4 165 60.0
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 3.4e-45 185.7 168 59.5
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 4.4e-45 185.3 135 69.6
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 5.8e-45 184.9 136 68.4
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 7.6e-45 184.5 135 68.9
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 9.9e-45 184.1 161 64.0
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 9.9e-45 184.1 109 82.6
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 1.3e-44 183.7 134 67.9
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.3e-44 183.7 134 70.1
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.3e-44 183.7 134 70.1
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 1.3e-44 183.7 189 54.5
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 1.7e-44 183.3 189 57.1
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 1.7e-44 183.3 130 68.5
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 2.2e-44 183.0 142 66.9
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 2.9e-44 182.6 126 69.0
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 2.9e-44 182.6 126 70.6
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 6.4e-44 181.4 191 55.5
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 8.4e-44 181.0 187 55.6
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 1.1e-43 180.6 142 66.2
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 1.1e-43 180.6 147 64.6
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 1.9e-43 179.9 183 56.8
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 2.4e-43 179.5 146 64.4
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 2.4e-43 179.5 175 58.3
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 3.2e-43 179.1 133 69.9
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 4.2e-43 178.7 124 69.4
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 9.2e-43 177.6 155 62.6
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 9.2e-43 177.6 187 55.1
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.2e-42 177.2 189 56.1
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.2e-42 177.2 189 56.1
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 3.5e-42 175.6 125 67.2
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 6.0e-42 174.9 137 67.2
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 7.8e-42 174.5 121 70.2
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 1.0e-41 174.1 123 69.1
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 1.3e-41 173.7 146 62.3
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 1.7e-41 173.3 169 57.4
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 3.0e-41 172.6 162 57.4
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 3.0e-41 172.6 186 53.2
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 3.9e-41 172.2 147 61.9
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 3.9e-41 172.2 174 56.3
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 6.6e-41 171.4 187 52.4
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 6.6e-41 171.4 124 66.1
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 1.1e-40 170.6 146 60.3
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 1.5e-40 170.2 138 61.6
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 1.5e-40 170.2 138 61.6
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 1.5e-40 170.2 138 61.6
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 1.5e-40 170.2 133 63.9
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 2.5e-40 169.5 176 53.4
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 3.3e-40 169.1 121 67.8
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 4.3e-40 168.7 140 59.3
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 4.3e-40 168.7 142 61.3
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 5.6e-40 168.3 186 49.5
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 7.3e-40 167.9 141 59.6
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 7.3e-40 167.9 143 60.8
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 7.3e-40 167.9 170 53.5
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 9.6e-40 167.5 172 52.9
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 1.2e-39 167.2 136 59.6
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 1.2e-39 167.2 141 61.7
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 4.7e-39 165.2 187 53.5
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 4.7e-39 165.2 121 66.1
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 1.4e-38 163.7 100 76.0
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 2.4e-38 162.9 185 53.0
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 2.9e-36 156.0 119 63.9
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 8.4e-36 154.5 150 54.7
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 2.1e-31 139.8 99 68.7
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 7.6e-29 131.3 144 53.5
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 7.6e-29 131.3 144 53.5
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 7.6e-29 131.3 144 53.5
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 8.4e-28 127.9 116 65.5
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 2.7e-26 122.9 147 46.3
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 2.1e-23 113.2 91 70.3
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 6.2e-23 111.7 105 55.2
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 5.3e-22 108.6 120 50.0
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 3.4e-21 105.9 131 44.3
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 1.3e-20 104.0 110 51.8
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 2.7e-18 96.3 72 66.7
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 8.7e-17 91.3 118 42.4
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 4.9e-12 75.5 49 67.3
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 7.9e-10 68.2 126 38.1
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 9.0e-06 54.7 44 56.8


User provided reference genes

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