Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 7.0e-78 293.9 149 100.0
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 1.4e-38 163.3 154 59.1
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 1.7e-36 156.4 156 57.7
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 1.1e-33 147.1 144 56.9
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 6.0e-21 104.8 177 42.4
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 7.8e-21 104.4 166 45.2
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 2.3e-20 102.8 159 46.5
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.1e-19 100.5 166 44.6
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.5e-19 100.1 160 46.2
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 3.3e-19 99.0 184 40.2
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 5.6e-19 98.2 154 42.9
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 3.6e-18 95.5 177 40.1
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 3.6e-18 95.5 187 40.6
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 1.1e-17 94.0 164 46.3
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 1.8e-17 93.2 183 39.9
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 2.4e-17 92.8 173 39.9
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 5.3e-17 91.7 166 39.8
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 5.3e-17 91.7 181 40.9
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 9.0e-17 90.9 187 39.6
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 9.0e-17 90.9 187 39.6
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 1.2e-16 90.5 122 46.7
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 2.0e-16 89.7 127 48.8
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 5.8e-16 88.2 187 39.0
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 7.6e-16 87.8 185 37.3
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 9.9e-16 87.4 172 39.0
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 1.3e-15 87.0 179 37.4
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 2.9e-15 85.9 172 40.1
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 6.4e-15 84.7 94 53.2
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 1.1e-14 84.0 167 40.1
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 1.4e-14 83.6 165 40.6
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 1.9e-14 83.2 161 41.0
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 1.9e-14 83.2 124 41.9
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 2.4e-14 82.8 147 43.5
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 3.2e-14 82.4 174 37.4
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 3.2e-14 82.4 173 39.3
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 4.2e-14 82.0 161 41.6
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 5.4e-14 81.6 103 50.5
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 9.3e-14 80.9 101 48.5
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 9.3e-14 80.9 112 47.3
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.2e-13 80.5 100 46.0
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 1.2e-13 80.5 167 40.1
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 1.6e-13 80.1 166 39.8
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 1.6e-13 80.1 109 46.8
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 2.1e-13 79.7 162 42.0
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 2.1e-13 79.7 106 47.2
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 2.1e-13 79.7 130 45.4
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 2.1e-13 79.7 129 44.2
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 2.7e-13 79.3 168 39.3
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 3.5e-13 79.0 71 62.0
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 3.5e-13 79.0 173 37.6
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 4.6e-13 78.6 175 35.4
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 6.0e-13 78.2 60 68.3
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 6.0e-13 78.2 154 40.9
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 6.0e-13 78.2 174 39.1
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 7.9e-13 77.8 168 36.9
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 7.9e-13 77.8 177 37.3
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 7.9e-13 77.8 175 35.4
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 1.0e-12 77.4 172 38.4
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 1.8e-12 76.6 177 41.2
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.8e-12 76.6 181 37.6
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 1.8e-12 76.6 162 39.5
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 2.3e-12 76.3 57 68.4
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.3e-12 76.3 175 38.9
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 2.3e-12 76.3 170 38.2
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 2.3e-12 76.3 170 38.2
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 2.3e-12 76.3 63 66.7
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 3.0e-12 75.9 107 46.7
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 3.9e-12 75.5 84 56.0
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 3.9e-12 75.5 172 34.9
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 3.9e-12 75.5 164 38.4
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 5.1e-12 75.1 177 37.3
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 8.7e-12 74.3 83 50.6
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 8.7e-12 74.3 128 43.0
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 8.7e-12 74.3 178 37.1
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.1e-11 73.9 97 46.4
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 1.1e-11 73.9 84 48.8
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 1.1e-11 73.9 169 39.6
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 1.5e-11 73.6 172 36.0
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 1.5e-11 73.6 178 37.6
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 1.9e-11 73.2 168 37.5
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 1.9e-11 73.2 158 38.0
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 2.5e-11 72.8 153 39.9
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 3.3e-11 72.4 100 42.0
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 4.3e-11 72.0 115 41.7
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 4.3e-11 72.0 154 40.3
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 7.4e-11 71.2 65 58.5
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 1.3e-10 70.5 65 58.5
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 3.7e-10 68.9 148 38.5
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 6.2e-10 68.2 143 40.6
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 6.2e-10 68.2 83 49.4
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 8.1e-10 67.8 70 57.1
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 1.1e-09 67.4 118 43.2
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 1.4e-09 67.0 142 39.4
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 1.4e-09 67.0 169 34.3
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 2.4e-09 66.2 165 36.4
Sed0016437 Sechium edule HOM05D006672 ORTHO05D007769 2.4e-09 66.2 121 41.3
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 4.0e-09 65.5 185 35.1
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 5.3e-09 65.1 165 36.4
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 6.9e-09 64.7 84 44.0
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 9.0e-09 64.3 69 49.3
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 7.6e-08 61.2 161 32.9
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 1.7e-07 60.1 124 41.1
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 1.7e-07 60.1 57 56.1
Zm00001eb098380 Zea mays HOM05D006672 ORTHO05D007769 1.7e-07 60.1 49 65.3
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 2.2e-07 59.7 161 32.9
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 4.9e-07 58.5 123 41.5
PGR102G0682 Punica granatum HOM05D006672 ORTHO05D007769 4.9e-07 58.5 40 75.0
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 6.4e-07 58.2 109 39.4
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 8.4e-07 57.8 118 39.0
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 4.2e-06 55.5 70 42.9
Os09g0344700 Oryza sativa ssp. japonica HOM05D006672 ORTHO05D007769 4.2e-06 55.5 44 68.2
Rhsim06G0080600 Rhododendron simsii HOM05D006672 ORTHO05D007769 7.1e-06 54.7 66 47.0
Lsat_1_v5_gn_4_162060 Lactuca sativa HOM05D006672 ORTHO05D007769 9.3e-06 54.3 81 43.2
SGA_v2.0_scaffold5G02564 Striga asiatica HOM05D000085 ORTHO05D000274 9.3e-06 54.3 66 51.5


User provided reference genes

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