Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 7.7e-80 300.4 153 100.0
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 3.5e-48 195.3 129 83.7
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 9.4e-46 187.2 128 82.8
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 7.5e-43 177.6 126 79.4
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 2.9e-39 165.6 126 71.4
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 2.9e-39 165.6 126 71.4
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 6.6e-39 164.5 126 70.6
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 2.8e-37 159.1 126 68.3
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 8.0e-37 157.5 126 67.5
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 1.4e-36 156.8 125 67.2
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 1.8e-36 156.4 126 69.8
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 1.8e-36 156.4 126 68.3
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 3.0e-36 155.6 125 64.0
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 3.0e-36 155.6 127 70.1
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 5.2e-36 154.8 126 68.3
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 8.9e-36 154.1 126 67.5
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 8.9e-36 154.1 126 67.5
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 1.2e-35 153.7 126 68.3
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 2.0e-35 152.9 121 68.6
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 2.0e-35 152.9 126 66.7
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 3.4e-35 152.1 126 65.9
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 4.4e-35 151.8 126 66.7
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 5.7e-35 151.4 127 68.5
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 7.5e-35 151.0 126 66.7
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 7.5e-35 151.0 126 66.7
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 7.5e-35 151.0 128 64.1
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 1.3e-34 150.2 127 66.9
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 1.3e-34 150.2 127 66.9
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 1.3e-34 150.2 126 66.7
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 1.7e-34 149.8 131 65.6
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 2.2e-34 149.4 122 68.0
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 3.7e-34 148.7 126 65.9
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 3.7e-34 148.7 127 65.4
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 4.9e-34 148.3 126 63.5
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 4.9e-34 148.3 117 70.9
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 4.9e-34 148.3 129 64.3
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 6.4e-34 147.9 129 64.3
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 6.4e-34 147.9 126 69.0
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 8.3e-34 147.5 127 66.1
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 8.3e-34 147.5 127 63.8
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 1.1e-33 147.1 131 64.1
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 1.4e-33 146.7 82 86.6
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 1.8e-33 146.4 127 66.1
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 1.8e-33 146.4 110 66.4
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 1.8e-33 146.4 127 63.8
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 3.2e-33 145.6 109 69.7
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 3.2e-33 145.6 128 64.1
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 3.2e-33 145.6 132 64.4
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 4.1e-33 145.2 134 63.4
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 4.1e-33 145.2 131 64.1
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 4.1e-33 145.2 102 71.6
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 4.1e-33 145.2 126 65.1
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 5.4e-33 144.8 121 65.3
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 5.4e-33 144.8 127 65.4
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 7.0e-33 144.4 121 66.1
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 7.0e-33 144.4 126 63.5
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.6e-32 143.3 127 62.2
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 2.0e-32 142.9 127 62.2
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 2.7e-32 142.5 127 64.6
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 2.7e-32 142.5 130 62.3
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 2.7e-32 142.5 104 72.1
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 3.5e-32 142.1 126 65.9
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 3.5e-32 142.1 96 71.9
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 5.9e-32 141.4 96 71.9
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 1.0e-31 140.6 134 63.4
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 2.3e-31 139.4 133 58.6
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 3.9e-31 138.7 117 64.1
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 5.0e-31 138.3 123 64.2
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 8.6e-31 137.5 130 57.7
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 8.6e-31 137.5 127 62.2
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 1.1e-30 137.1 128 57.8
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 1.9e-30 136.3 79 82.3
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 4.3e-30 135.2 126 61.9
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 5.6e-30 134.8 128 61.7
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 2.8e-29 132.5 120 63.3
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 3.6e-29 132.1 79 84.8
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 4.7e-29 131.7 119 62.2
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 8.0e-29 131.0 74 86.5
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 1.0e-28 130.6 118 61.9
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 1.0e-28 130.6 106 68.9
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 2.3e-28 129.4 67 88.1
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 3.1e-28 129.0 138 58.0
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 4.0e-28 128.6 69 84.1
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 4.0e-28 128.6 113 61.9
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 2.0e-27 126.3 130 58.5
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 4.9e-26 121.7 130 56.9
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 1.4e-25 120.2 76 76.3
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 5.4e-25 118.2 130 56.9
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 7.0e-25 117.9 169 43.8
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 3.9e-23 112.1 72 76.4
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 8.6e-23 110.9 71 69.0
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 3.3e-22 109.0 70 70.0
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 1.8e-20 103.2 48 100.0
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 6.8e-20 101.3 49 91.8
MELO3C025961.2 Cucumis melo HOM05D007442 ORTHO05D009284 4.4e-19 98.6 83 71.1
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 9.8e-19 97.4 113 52.2
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 1.0e-15 87.4 70 57.1
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 2.5e-14 82.8 52 67.3
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 4.1e-09 65.5 69 46.4
COL.COLO4_33329 Corchorus olitorius HOM05D007442 ORTHO05D009284 2.5e-06 56.2 78 48.7


User provided reference genes

Program Settings