Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 2.9e-41 171.4 83 100.0
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 1.2e-31 139.4 83 80.7
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 2.1e-31 138.7 79 84.8
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 2.1e-31 138.7 82 78.0
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 2.7e-31 138.3 79 83.5
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 6.1e-31 137.1 83 78.3
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 6.1e-31 137.1 83 78.3
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 7.9e-31 136.7 79 81.0
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 7.9e-31 136.7 82 76.8
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 1.0e-30 136.3 81 77.8
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 1.0e-30 136.3 81 77.8
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 1.0e-30 136.3 81 77.8
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.0e-30 136.3 83 78.3
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 1.0e-30 136.3 83 78.3
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 1.4e-30 136.0 79 81.0
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 1.4e-30 136.0 83 77.1
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 1.4e-30 136.0 83 77.1
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.4e-30 136.0 83 78.3
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 1.8e-30 135.6 83 79.5
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 2.3e-30 135.2 81 79.0
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 2.3e-30 135.2 79 79.7
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 2.3e-30 135.2 79 81.0
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 2.3e-30 135.2 81 76.5
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 3.0e-30 134.8 83 75.9
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.0e-30 134.8 83 75.9
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.0e-30 134.8 83 75.9
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.0e-30 134.8 83 75.9
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 3.0e-30 134.8 81 76.5
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 3.9e-30 134.4 81 75.3
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 5.1e-30 134.0 79 78.5
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 5.1e-30 134.0 78 79.5
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 5.1e-30 134.0 81 77.8
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 6.7e-30 133.7 81 76.5
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 6.7e-30 133.7 81 76.5
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 6.7e-30 133.7 81 76.5
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 6.7e-30 133.7 81 76.5
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 6.7e-30 133.7 81 76.5
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 8.8e-30 133.3 83 78.3
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 8.8e-30 133.3 82 75.6
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.1e-29 132.9 81 75.3
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.1e-29 132.9 81 75.3
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 1.1e-29 132.9 81 76.5
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 1.5e-29 132.5 81 75.3
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 2.0e-29 132.1 81 75.3
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 2.0e-29 132.1 79 77.2
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 3.3e-29 131.3 75 82.7
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 4.4e-29 131.0 81 74.1
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 1.3e-28 129.4 79 78.5
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 1.3e-28 129.4 79 77.2
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 1.3e-28 129.4 79 77.2
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 1.3e-28 129.4 83 72.3
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 1.7e-28 129.0 79 75.9
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 2.8e-28 128.3 75 80.0
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 4.8e-28 127.5 80 73.8
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 4.8e-28 127.5 76 81.6
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 8.2e-28 126.7 77 80.5
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 1.8e-27 125.6 77 75.3
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 2.4e-27 125.2 77 76.6
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 3.1e-27 124.8 72 80.6
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 3.1e-27 124.8 75 80.0
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 4.1e-27 124.4 76 78.9
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 7.0e-27 123.6 69 85.5
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 9.1e-27 123.2 78 76.9
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 9.1e-27 123.2 76 76.3
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 9.1e-27 123.2 76 77.6
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 9.1e-27 123.2 77 77.9
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 9.1e-27 123.2 84 72.6
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 9.1e-27 123.2 84 72.6
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 1.2e-26 122.9 76 78.9
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 2.0e-26 122.1 91 68.1
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 3.5e-26 121.3 76 73.7
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 4.5e-26 120.9 76 76.3
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 4.5e-26 120.9 76 77.6
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 1.0e-25 119.8 76 73.7
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 1.7e-25 119.0 70 80.0
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.2e-25 118.6 68 85.3
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 2.2e-25 118.6 76 75.0
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 2.9e-25 118.2 76 72.4
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 5.0e-25 117.5 76 76.3
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 3.2e-24 114.8 83 69.9
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 3.2e-24 114.8 76 73.7
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 4.2e-24 114.4 76 73.7
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 7.2e-24 113.6 77 71.4
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 9.4e-24 113.2 69 81.2
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 9.4e-24 113.2 77 71.4
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 1.2e-23 112.8 77 68.8
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 2.1e-23 112.1 67 79.1
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 2.1e-23 112.1 75 73.3
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 2.1e-23 112.1 77 70.1
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 2.7e-23 111.7 68 79.4
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 2.7e-23 111.7 75 73.3
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 3.6e-23 111.3 64 82.8
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 4.7e-23 110.9 69 73.9
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.0e-22 109.8 67 79.1
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 1.4e-22 109.4 77 67.5
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 3.0e-22 108.2 99 59.6
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 1.5e-21 105.9 71 69.0
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 3.3e-21 104.8 68 73.5
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 3.3e-21 104.8 67 74.6
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 1.3e-20 102.8 76 67.1
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 2.2e-20 102.1 95 57.9
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 3.7e-20 101.3 54 88.9
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 3.7e-20 101.3 58 82.8
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 1.4e-19 99.4 147 40.1
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 5.3e-19 97.4 61 75.4
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 3.5e-18 94.7 60 76.7
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 7.7e-18 93.6 122 45.9
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 2.2e-17 92.0 68 64.7
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 1.1e-16 89.7 57 75.4
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 1.9e-16 89.0 52 82.7
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 4.7e-15 84.3 65 61.5
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 4.7e-15 84.3 52 78.8
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 4.7e-15 84.3 55 78.2
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 8.0e-15 83.6 59 72.9
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.4e-14 82.8 59 72.9
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.8e-14 82.4 72 55.6
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 2.3e-14 82.0 67 61.2
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 1.5e-13 79.3 62 66.1
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 1.7e-12 75.9 72 52.8
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 6.3e-12 73.9 62 61.3
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 1.6e-10 69.3 39 89.7
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 2.5e-08 62.0 35 85.7
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 4.7e-07 57.8 51 54.9
SHI34267 Sapria himalayana HOM05D006711 ORTHO05D008104 8.0e-07 57.0 55 58.2


User provided reference genes

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