Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 7.2e-122 440.7 231 100.0
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 2.8e-102 375.6 234 84.2
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 1.1e-93 347.1 227 78.4
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 5.3e-93 344.7 238 74.8
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 4.5e-92 341.7 232 77.2
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 2.7e-89 332.4 225 76.0
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 4.7e-89 331.6 231 74.0
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 8.0e-89 330.9 229 73.8
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 8.0e-89 330.9 229 73.8
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 8.0e-89 330.9 233 75.5
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.8e-88 329.7 231 73.6
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.8e-88 329.7 231 73.6
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 2.3e-88 329.3 231 74.0
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 1.2e-87 327.0 234 73.9
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 1.7e-86 323.2 230 73.0
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 6.3e-86 321.2 228 74.6
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 6.3e-86 321.2 228 74.6
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 8.3e-86 320.9 231 73.6
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 1.1e-85 320.5 232 72.8
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 1.4e-85 320.1 234 70.5
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 2.4e-85 319.3 234 72.2
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 4.1e-85 318.5 232 71.1
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 4.1e-85 318.5 241 73.4
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 5.4e-85 318.2 228 74.1
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 5.4e-85 318.2 228 74.1
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 5.4e-85 318.2 234 73.1
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 7.0e-85 317.8 237 70.9
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 2.7e-84 315.8 233 73.4
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 3.5e-84 315.5 234 71.4
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 4.5e-84 315.1 231 71.9
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 7.7e-84 314.3 231 71.9
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 7.7e-84 314.3 233 73.0
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 1.0e-83 313.9 231 71.0
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 1.3e-83 313.5 233 72.1
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 1.3e-83 313.5 232 70.7
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 2.3e-83 312.8 237 68.8
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 2.9e-83 312.4 231 73.2
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 3.8e-83 312.0 237 73.0
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 5.0e-83 311.6 230 71.3
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 6.5e-83 311.2 237 71.7
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 1.5e-82 310.1 231 72.3
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 3.3e-82 308.9 233 72.1
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 4.2e-82 308.5 242 71.5
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 5.5e-82 308.1 236 69.9
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 9.5e-82 307.4 247 67.6
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 4.7e-81 305.1 235 68.9
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 4.7e-81 305.1 227 67.8
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 6.1e-81 304.7 228 71.1
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 8.0e-81 304.3 236 69.9
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 1.4e-80 303.5 234 71.4
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 1.8e-80 303.1 235 68.9
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 8.9e-80 300.8 235 69.4
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 1.5e-79 300.1 216 73.1
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 1.5e-79 300.1 229 72.5
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 4.4e-79 298.5 200 76.5
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 5.7e-79 298.1 183 82.5
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 1.7e-78 296.6 233 68.2
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 1.7e-78 296.6 260 65.0
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 1.7e-78 296.6 231 68.8
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 2.2e-78 296.2 234 69.7
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 1.4e-77 293.5 237 68.4
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 3.1e-77 292.4 232 65.1
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 4.1e-77 292.0 233 67.0
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 4.1e-77 292.0 237 70.0
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 4.1e-77 292.0 230 68.3
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 7.0e-77 291.2 237 67.9
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 4.5e-76 288.5 233 65.2
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 1.7e-75 286.6 239 69.5
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 2.9e-75 285.8 237 69.6
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 1.1e-74 283.9 240 64.2
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 1.1e-74 283.9 236 67.8
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 1.9e-74 283.1 207 70.0
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 4.3e-74 282.0 229 64.6
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 4.3e-74 282.0 230 67.4
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 5.6e-74 281.6 236 65.7
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 7.3e-74 281.2 227 68.7
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 7.3e-74 281.2 239 68.2
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 4.7e-73 278.5 235 64.7
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 8.3e-70 267.7 239 65.7
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 1.4e-69 266.9 233 63.1
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 3.2e-69 265.8 235 63.8
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 9.2e-69 264.2 230 62.6
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 7.3e-66 254.6 240 62.9
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 1.2e-65 253.8 186 69.4
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 5.8e-63 245.0 171 72.5
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 7.5e-63 244.6 233 57.1
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 9.8e-63 244.2 230 60.4
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 1.7e-62 243.4 231 60.2
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 4.1e-61 238.8 188 67.0
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 1.2e-60 237.3 228 58.8
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 1.2e-60 237.3 185 67.6
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 1.1e-58 230.7 240 56.7
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 1.1e-58 230.7 143 81.1
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 6.8e-56 221.5 142 78.2
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 8.9e-56 221.1 137 82.5
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 7.5e-55 218.0 231 56.3
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 7.1e-53 211.5 139 77.0
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 6.6e-51 204.9 139 74.8
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 5.6e-50 201.8 122 84.4
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 7.1e-45 184.9 228 50.4
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 7.8e-44 181.4 177 52.0
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 1.3e-43 180.6 95 87.4
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 1.9e-42 176.8 188 47.9
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 4.3e-42 175.6 190 50.0
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 3.1e-40 169.5 179 48.0
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 3.8e-38 162.5 229 48.9
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 1.3e-35 154.1 140 60.0
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 1.1e-34 151.0 140 60.7
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 1.9e-34 150.2 176 44.9
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 4.2e-29 132.5 91 75.8
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 1.8e-27 127.1 156 42.3
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 4.0e-24 115.9 237 38.0
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 4.6e-20 102.4 57 87.7
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 4.2e-13 79.3 91 52.7
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 1.2e-12 77.8 142 26.1
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 8.7e-11 71.6 157 28.0
Cre03.g146167 Chlamydomonas reinhardtii HOM05D001304 ORTHO05D008890 9.0e-08 61.6 162 27.8
Ah.03g133980 Amaranthus hybridus HOM05D007778 ORTHO05D009819 1.2e-07 61.2 230 28.3


User provided reference genes

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