Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004927 Sechium edule HOM05D000009 ORTHO05D016945 1.0e-131 473.4 238 100.0
Sed0001087 Sechium edule HOM05D000009 ORTHO05D000008 3.8e-33 146.0 160 56.2
Sed0019643 Sechium edule HOM05D000009 ORTHO05D000008 6.0e-31 138.7 162 54.3
Sed0027826 Sechium edule HOM05D000009 ORTHO05D000008 8.1e-28 128.3 159 49.1
Sed0022024 Sechium edule HOM05D000009 ORTHO05D000008 4.0e-27 125.9 160 49.4
ClCG02G007660 Citrullus lanatus HOM05D000009 ORTHO05D000008 1.7e-25 120.6 157 49.0
ClCG02G007710 Citrullus lanatus HOM05D000009 ORTHO05D000008 1.7e-25 120.6 157 49.0
MELO3C021831.2 Cucumis melo HOM05D000009 ORTHO05D000008 8.4e-25 118.2 157 47.1
MELO3C024725.2 Cucumis melo HOM05D000009 ORTHO05D000008 8.4e-25 118.2 157 47.1
CsaV3_2G036220 Cucumis sativus L. HOM05D000009 ORTHO05D000008 3.9e-22 109.4 157 45.9
CsaV3_3G031840 Cucumis sativus L. HOM05D000009 ORTHO05D000008 5.6e-21 105.5 158 43.7
MELO3C033615.2 Cucumis melo HOM05D000009 ORTHO05D016945 2.6e-18 96.7 67 76.1
Sed0021683 Sechium edule HOM05D000009 ORTHO05D000008 9.9e-18 94.7 155 39.4
CsaV3_3G032610 Cucumis sativus L. HOM05D000052 ORTHO05D009792 1.4e-16 90.9 59 79.7
CsaV3_4G003630 Cucumis sativus L. HOM05D000009 ORTHO05D000008 7.1e-16 88.6 156 37.8
CsaV3_5G012440 Cucumis sativus L. HOM05D000009 ORTHO05D000008 1.6e-12 77.4 74 52.7
ClCG10G015850 Citrullus lanatus HOM05D000009 ORTHO05D000008 2.1e-12 77.0 75 52.0
MELO3C017692.2 Cucumis melo HOM05D000009 ORTHO05D000008 2.1e-12 77.0 63 58.7
ClCG07G015870 Citrullus lanatus HOM05D000009 ORTHO05D016945 6.2e-12 75.5 65 56.9
CsaV3_2G003160 Cucumis sativus L. HOM05D000009 ORTHO05D000008 5.3e-11 72.4 105 44.8
QL10p058697 Quercus lobata HOM05D000009 ORTHO05D000008 1.0e-09 68.2 112 38.4
Sed0025891 Sechium edule HOM05D000009 ORTHO05D000008 4.9e-09 65.9 156 30.1
MELO3C028779.2 Cucumis melo HOM05D000009 ORTHO05D016945 8.4e-09 65.1 56 53.6
GSVIVG01022961001 Vitis vinifera HOM05D000009 ORTHO05D000008 8.4e-09 65.1 114 36.8
MELO3C017701.2 Cucumis melo HOM05D000009 ORTHO05D000008 1.1e-08 64.7 153 29.4
ClCG08G002410 Citrullus lanatus HOM05D000009 ORTHO05D000008 1.4e-08 64.3 153 28.8
Sed0018579 Sechium edule HOM05D000009 ORTHO05D000008 4.2e-08 62.8 158 29.7
ClCG07G015810 Citrullus lanatus HOM05D000009 ORTHO05D000008 5.5e-08 62.4 156 29.5
CsaV3_2G036080 Cucumis sativus L. HOM05D000009 ORTHO05D000008 5.5e-08 62.4 155 33.5
CsaV3_4G003510 Cucumis sativus L. HOM05D000009 ORTHO05D000008 5.5e-08 62.4 153 30.1
MELO3C017700.2 Cucumis melo HOM05D000009 ORTHO05D000008 9.3e-08 61.6 160 31.2
Sed0025534 Sechium edule HOM05D000009 ORTHO05D000008 1.2e-07 61.2 156 27.6
TAR633G0703 Trochodendron aralioides HOM05D000009 ORTHO05D000008 1.2e-07 61.2 60 48.3
TAR633G1401 Trochodendron aralioides HOM05D000009 ORTHO05D000008 1.2e-07 61.2 60 48.3
QL09p041682 Quercus lobata HOM05D000009 ORTHO05D000008 1.6e-07 60.8 62 48.4
QL10p057818 Quercus lobata HOM05D000009 ORTHO05D000008 1.6e-07 60.8 157 28.0
QL11p007817 Quercus lobata HOM05D000009 ORTHO05D000008 1.6e-07 60.8 75 38.7
CsaV3_4G003500 Cucumis sativus L. HOM05D000009 ORTHO05D000008 2.1e-07 60.5 155 27.7
Duzib106G0940 Durio zibethinus HOM05D000009 ORTHO05D000008 2.1e-07 60.5 65 46.2
Duzib106G1007 Durio zibethinus HOM05D000009 ORTHO05D000008 2.1e-07 60.5 65 46.2
PSO675G6657 Papaver somniferum HOM05D000009 ORTHO05D000008 2.1e-07 60.5 66 43.9
ClCG07G015790 Citrullus lanatus HOM05D000009 ORTHO05D000008 2.7e-07 60.1 155 27.7
MELO3C017703.2 Cucumis melo HOM05D000009 ORTHO05D000008 2.7e-07 60.1 155 27.7
CsaV3_4G003520 Cucumis sativus L. HOM05D000009 ORTHO05D000008 2.7e-07 60.1 158 31.0
QL10p056853 Quercus lobata HOM05D000009 ORTHO05D000008 3.5e-07 59.7 62 45.2
QL10p059218 Quercus lobata HOM05D000009 ORTHO05D000008 3.5e-07 59.7 73 43.8
Duzib106G0419 Durio zibethinus HOM05D000009 ORTHO05D000008 4.6e-07 59.3 94 38.3
QL10p058378 Quercus lobata HOM05D000009 ORTHO05D000008 4.6e-07 59.3 153 28.1
QL10p058489 Quercus lobata HOM05D000009 ORTHO05D000008 4.6e-07 59.3 153 28.1
QL11p007770 Quercus lobata HOM05D000009 ORTHO05D000008 4.6e-07 59.3 153 28.1
TAR633G2051 Trochodendron aralioides HOM05D000009 ORTHO05D003343 4.6e-07 59.3 80 41.2
Gohir.D04G018466 Gossypium hirsutum HOM05D000009 ORTHO05D000008 6.0e-07 58.9 101 34.7
TAR633G1664 Trochodendron aralioides HOM05D000009 ORTHO05D000008 6.0e-07 58.9 60 46.7
TAR633G2462 Trochodendron aralioides HOM05D000009 ORTHO05D000008 6.0e-07 58.9 60 46.7
Actinidia02534 Actinidia chinensis HOM05D000009 ORTHO05D004650 1.0e-06 58.2 152 28.9
Cc00_g19750 Coffea canephora HOM05D000009 ORTHO05D000008 1.0e-06 58.2 61 42.6
Duzib106G0364 Durio zibethinus HOM05D000009 ORTHO05D000008 1.0e-06 58.2 51 52.9
QL10p051192 Quercus lobata HOM05D000009 ORTHO05D000008 1.0e-06 58.2 78 42.3
QL11p007761 Quercus lobata HOM05D000009 ORTHO05D000008 1.0e-06 58.2 153 27.5
QL04p014440 Quercus lobata HOM05D000009 ORTHO05D000008 1.3e-06 57.8 92 38.0
QL10p057248 Quercus lobata HOM05D000009 ORTHO05D000008 1.3e-06 57.8 153 27.5
QL10p058132 Quercus lobata HOM05D000009 ORTHO05D000008 1.3e-06 57.8 153 27.5
Sabra01G0021100 Salix brachista HOM05D000009 ORTHO05D000008 1.3e-06 57.8 124 30.6
Sed0005593 Sechium edule HOM05D000009 ORTHO05D016945 1.3e-06 57.8 122 31.1
MELO3C003183.2 Cucumis melo HOM05D000009 ORTHO05D016945 1.8e-06 57.4 57 49.1
Hma1.2p1_0487F.1_g163560 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.8e-06 57.4 62 46.8
PSO170G1729 Papaver somniferum HOM05D000009 ORTHO05D000008 1.8e-06 57.4 159 27.0
QL10p057042 Quercus lobata HOM05D000009 ORTHO05D000008 1.8e-06 57.4 122 29.5
QL10p059153 Quercus lobata HOM05D000009 ORTHO05D000008 1.8e-06 57.4 62 43.5
Prupe.6G243700 Prunus persica HOM05D000009 ORTHO05D000008 2.3e-06 57.0 61 44.3
QL05p015193 Quercus lobata HOM05D000009 ORTHO05D000008 2.3e-06 57.0 65 44.6
QL10p058166 Quercus lobata HOM05D000009 ORTHO05D000008 2.3e-06 57.0 75 37.3
Thecc.04G161700 Theobroma cacao HOM05D000009 ORTHO05D000008 2.3e-06 57.0 166 28.3
Duzib106G1869 Durio zibethinus HOM05D000009 ORTHO05D000008 3.0e-06 56.6 120 33.3
Hma1.2p1_0177F.1_g077840 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 3.0e-06 56.6 61 47.5
QL10p056686 Quercus lobata HOM05D000009 ORTHO05D000008 3.0e-06 56.6 62 41.9
QL10p058402 Quercus lobata HOM05D000009 ORTHO05D000008 3.0e-06 56.6 62 43.5
RcHm_v2.0_Chr4g0422591 Rosa chinensis HOM05D000009 ORTHO05D000008 3.0e-06 56.6 62 41.9
Duzib212G0677 Durio zibethinus HOM05D000009 ORTHO05D000008 3.9e-06 56.2 124 29.8
Eucgr.H01020 Eucalyptus grandis HOM05D000009 ORTHO05D000008 3.9e-06 56.2 63 44.4
FvH4_6g15090 Fragaria vesca HOM05D000009 ORTHO05D000008 3.9e-06 56.2 61 41.0
FAN05G3394 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.1e-06 55.8 128 32.0
FAN14G0893 Fragaria x ananassa HOM05D000009 ORTHO05D003819 5.1e-06 55.8 102 37.3
Hma1.2p1_1928F.1_g307860 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 5.1e-06 55.8 73 38.4
Manes.13G036800 Manihot esculenta HOM05D000009 ORTHO05D000008 5.1e-06 55.8 61 44.3
CANSAT80G0256 Cannabis sativa HOM05D000009 ORTHO05D000008 6.7e-06 55.5 61 45.9
DCAR_008833 Daucus carota HOM05D000009 ORTHO05D000008 6.7e-06 55.5 95 35.8
Duzib106G1964 Durio zibethinus HOM05D000009 ORTHO05D000008 6.7e-06 55.5 62 45.2
Hma1.2p1_0177F.1_g077850 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 6.7e-06 55.5 155 27.1
Prupe.2G111700 Prunus persica HOM05D000009 ORTHO05D000008 6.7e-06 55.5 61 45.9
QL10p035024 Quercus lobata HOM05D000009 ORTHO05D000008 6.7e-06 55.5 153 28.1
QL10p057758 Quercus lobata HOM05D000009 ORTHO05D000008 6.7e-06 55.5 62 43.5
QL10p058621 Quercus lobata HOM05D000009 ORTHO05D000008 6.7e-06 55.5 174 27.6
RcHm_v2.0_Chr3g0467731 Rosa chinensis HOM05D000009 ORTHO05D000008 6.7e-06 55.5 62 46.8
RcHm_v2.0_Chr4g0422651 Rosa chinensis HOM05D000009 ORTHO05D000008 6.7e-06 55.5 62 41.9
GSVIVG01001471001 Vitis vinifera HOM05D000009 ORTHO05D000008 6.7e-06 55.5 94 37.2
Cc00_g16010 Coffea canephora HOM05D000009 ORTHO05D000008 8.7e-06 55.1 61 49.2
Eucgr.H01035 Eucalyptus grandis HOM05D000009 ORTHO05D000008 8.7e-06 55.1 63 44.4
PSO675G3728 Papaver somniferum HOM05D000009 ORTHO05D000008 8.7e-06 55.1 66 40.9
Prupe.2G111800 Prunus persica HOM05D000009 ORTHO05D000008 8.7e-06 55.1 61 45.9
QL04p014986 Quercus lobata HOM05D000009 ORTHO05D000008 8.7e-06 55.1 57 49.1
QL10p057397 Quercus lobata HOM05D000009 ORTHO05D000008 8.7e-06 55.1 148 28.4
Rhsim07G0059900 Rhododendron simsii HOM05D000009 ORTHO05D000008 8.7e-06 55.1 168 29.2
Rhsim07G0060500 Rhododendron simsii HOM05D000009 ORTHO05D000008 8.7e-06 55.1 94 36.2
RcHm_v2.0_Chr4g0422471 Rosa chinensis HOM05D000009 ORTHO05D000008 8.7e-06 55.1 62 40.3
Thecc.04G157700 Theobroma cacao HOM05D000009 ORTHO05D000008 8.7e-06 55.1 62 43.5
Thecc.04G163600 Theobroma cacao HOM05D000009 ORTHO05D000008 8.7e-06 55.1 62 48.4


User provided reference genes

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