Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 5.5e-72 274.2 142 100.0
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 2.5e-61 238.8 142 85.2
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 3.4e-58 228.4 143 81.8
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 2.7e-55 218.8 144 79.9
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 9.7e-37 157.1 136 65.4
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 2.6e-34 149.1 109 69.7
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 2.2e-33 146.0 137 58.4
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 2.9e-33 145.6 135 57.0
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 2.9e-33 145.6 134 59.7
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 5.0e-33 144.8 139 57.6
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 1.1e-32 143.7 133 58.6
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 1.5e-32 143.3 102 70.6
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 3.2e-32 142.1 136 56.6
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 3.2e-32 142.1 131 59.5
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 1.6e-31 139.8 111 65.8
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 1.6e-31 139.8 139 57.6
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 1.6e-31 139.8 98 69.4
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 2.1e-31 139.4 136 55.9
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 4.7e-31 138.3 142 58.5
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 8.0e-31 137.5 137 55.5
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 5.2e-30 134.8 144 51.4
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 6.7e-30 134.4 137 51.1
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 8.8e-30 134.0 100 69.0
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 1.5e-29 133.3 131 58.0
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 1.5e-29 133.3 140 53.6
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 2.6e-29 132.5 104 67.3
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 3.3e-29 132.1 162 50.6
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 3.3e-29 132.1 158 53.8
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 4.4e-29 131.7 133 54.1
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 5.7e-29 131.3 161 51.6
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 7.5e-29 131.0 161 51.6
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 2.2e-28 129.4 131 55.0
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 2.8e-28 129.0 157 51.0
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 2.8e-28 129.0 141 52.5
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 3.7e-28 128.6 139 53.2
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 3.7e-28 128.6 130 52.3
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 2.4e-27 125.9 145 51.0
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 2.4e-27 125.9 150 49.3
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 4.1e-27 125.2 140 54.3
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 4.1e-27 125.2 133 51.1
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 1.2e-26 123.6 143 51.0
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 2.0e-26 122.9 146 51.4
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 2.7e-26 122.5 132 53.0
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 3.5e-26 122.1 114 55.3
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 4.5e-26 121.7 146 49.3
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 1.3e-25 120.2 127 53.5
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 1.7e-25 119.8 117 54.7
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 1.7e-25 119.8 95 62.1
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 3.8e-25 118.6 138 50.7
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 5.0e-25 118.2 108 58.3
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 6.5e-25 117.9 131 51.1
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 2.5e-24 115.9 139 50.4
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 2.5e-24 115.9 105 53.3
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 3.2e-24 115.5 109 56.9
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 2.1e-23 112.8 113 56.6
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 2.1e-23 112.8 111 56.8
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 2.1e-23 112.8 111 56.8
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 3.6e-23 112.1 95 61.1
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 1.8e-22 109.8 141 48.9
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 5.7e-21 104.8 110 57.3
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 1.3e-20 103.6 105 57.1
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 1.3e-20 103.6 105 55.2
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 2.2e-20 102.8 142 47.9
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 2.8e-20 102.4 110 55.5
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 3.7e-20 102.1 110 53.6
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 4.8e-20 101.7 105 56.2
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 6.3e-20 101.3 142 46.5
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 6.3e-20 101.3 181 42.5
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 8.3e-20 100.9 137 46.0
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.1e-19 100.5 125 52.8
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 1.1e-19 100.5 105 56.2
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 1.8e-19 99.8 156 44.2
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 2.4e-19 99.4 123 47.2
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 3.1e-19 99.0 106 54.7
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 3.1e-19 99.0 105 57.1
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 3.1e-19 99.0 105 57.1
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 1.2e-18 97.1 100 55.0
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 2.7e-18 95.9 106 55.7
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 2.3e-17 92.8 106 52.8
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 1.5e-16 90.1 107 54.2
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 2.5e-16 89.4 136 44.1
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 4.2e-16 88.6 133 43.6
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 4.2e-16 88.6 133 43.6
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 3.6e-15 85.5 107 53.3
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 4.7e-15 85.1 125 46.4
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 1.8e-14 83.2 108 50.9
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 5.2e-14 81.6 112 48.2
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 6.8e-14 81.3 112 48.2
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 8.9e-14 80.9 131 40.5
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 1.3e-12 77.0 129 41.1
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 1.1e-11 73.9 112 45.5
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.4e-11 73.6 125 40.8
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 4.1e-11 72.0 124 39.5
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 1.2e-10 70.5 81 43.2
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.3e-09 66.2 96 44.8
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.3e-09 66.2 107 43.9
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 3.8e-09 65.5 122 36.1
SHI04088 Sapria himalayana HOM05D007629 ORTHO05D009511 2.1e-07 59.7 92 43.5
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 2.8e-07 59.3 140 32.9
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 2.8e-07 59.3 128 39.1
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 4.7e-07 58.5 48 54.2
BolC8t52551H Brassica oleracea HOM05D001466 ORTHO05D001452 8.0e-07 57.8 108 36.1


User provided reference genes

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