Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 8.6e-84 313.5 151 100.0
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 4.8e-42 174.9 139 66.2
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 1.9e-38 162.9 109 77.1
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 5.5e-38 161.4 114 71.9
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 3.0e-28 129.0 88 72.7
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 3.9e-28 128.6 95 67.4
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 5.1e-28 128.3 95 67.4
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 5.1e-28 128.3 95 67.4
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 1.1e-27 127.1 88 71.6
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 1.5e-27 126.7 99 63.6
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 1.5e-27 126.7 123 52.8
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 1.5e-27 126.7 93 65.6
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 2.6e-27 125.9 93 67.7
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 3.3e-27 125.6 89 67.4
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 5.7e-27 124.8 93 66.7
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 5.7e-27 124.8 89 69.7
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 5.7e-27 124.8 91 69.2
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 5.7e-27 124.8 89 68.5
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 1.3e-26 123.6 93 64.5
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 1.7e-26 123.2 92 67.4
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 1.7e-26 123.2 91 68.1
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 3.7e-26 122.1 99 63.6
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 4.8e-26 121.7 93 64.5
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 4.8e-26 121.7 93 64.5
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 4.8e-26 121.7 95 66.3
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 8.2e-26 120.9 93 65.6
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 8.2e-26 120.9 93 62.4
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 8.2e-26 120.9 93 64.5
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.1e-25 120.6 93 63.4
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.1e-25 120.6 95 62.1
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.1e-25 120.6 95 62.1
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 1.1e-25 120.6 93 62.4
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 1.1e-25 120.6 93 62.4
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 1.4e-25 120.2 89 66.3
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 1.4e-25 120.2 88 67.0
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 1.4e-25 120.2 89 66.3
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 1.4e-25 120.2 93 62.4
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 1.8e-25 119.8 86 68.6
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.8e-25 119.8 95 62.1
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 1.8e-25 119.8 93 62.4
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 2.4e-25 119.4 93 65.6
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 2.4e-25 119.4 88 67.0
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 3.1e-25 119.0 88 65.9
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 3.1e-25 119.0 89 65.2
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 3.1e-25 119.0 89 65.2
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 3.1e-25 119.0 94 61.7
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 3.1e-25 119.0 95 64.2
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 5.3e-25 118.2 89 64.0
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 5.3e-25 118.2 88 65.9
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 5.3e-25 118.2 89 66.3
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 5.3e-25 118.2 89 66.3
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 6.9e-25 117.9 89 64.0
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 6.9e-25 117.9 88 64.8
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 6.9e-25 117.9 88 64.8
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 6.9e-25 117.9 93 63.4
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 9.1e-25 117.5 93 63.4
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 1.5e-24 116.7 88 64.8
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 2.0e-24 116.3 89 62.9
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 2.0e-24 116.3 91 65.9
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 2.6e-24 115.9 89 65.2
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 4.5e-24 115.2 90 65.6
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 4.5e-24 115.2 89 65.2
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 7.7e-24 114.4 91 62.6
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 7.7e-24 114.4 88 63.6
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.0e-23 114.0 95 61.1
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 1.7e-23 113.2 88 62.5
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 2.2e-23 112.8 89 60.7
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.2e-23 112.8 89 60.7
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.2e-23 112.8 89 60.7
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 3.8e-23 112.1 88 62.5
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 5.0e-23 111.7 91 60.4
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 6.5e-23 111.3 88 62.5
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 8.5e-23 110.9 89 59.6
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.9e-22 109.8 89 58.4
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 2.5e-22 109.4 88 59.1
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 3.2e-22 109.0 82 65.9
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 4.2e-22 108.6 93 55.9
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.5e-22 108.2 89 60.7
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 9.4e-22 107.5 92 56.5
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 9.4e-22 107.5 84 61.9
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 2.1e-21 106.3 96 54.2
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 4.7e-21 105.1 82 63.4
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 4.7e-21 105.1 95 54.7
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 7.9e-21 104.4 86 58.1
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 1.8e-20 103.2 89 59.6
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 3.9e-20 102.1 92 52.2
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.0e-19 99.8 117 47.0
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 3.3e-19 99.0 84 61.9
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 9.7e-19 97.4 101 55.4
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 2.2e-18 96.3 83 59.0
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 2.2e-18 96.3 70 67.1
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 2.8e-18 95.9 92 51.1
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 6.3e-18 94.7 70 64.3
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 6.3e-18 94.7 89 50.6
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 6.3e-18 94.7 89 50.6
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 6.3e-18 94.7 89 50.6
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 6.3e-18 94.7 89 50.6
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 6.3e-18 94.7 70 62.9
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 1.8e-17 93.2 88 52.3
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 1.8e-17 93.2 88 52.3
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 1.0e-15 87.4 78 60.3
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 3.8e-15 85.5 60 70.0
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 8.5e-15 84.3 68 60.3
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 1.5e-14 83.6 60 68.3
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 6.1e-13 78.2 69 59.4
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 8.8e-12 74.3 89 44.9
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 5.9e-08 61.6 58 51.7
QL03p004924 Quercus lobata HOM05D000015 ORTHO05D009146 5.0e-07 58.5 93 39.8
QL05p071991 Quercus lobata HOM05D000015 ORTHO05D009146 5.0e-07 58.5 93 39.8
Aqoxy2G01184 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 6.5e-07 58.2 93 39.8
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 1.1e-06 57.4 53 56.6
Sabra11G0008100 Salix brachista HOM05D000015 ORTHO05D009146 1.9e-06 56.6 56 53.6
Aqoxy1G02962 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 4.2e-06 55.5 94 39.4
HanXRQChr15g0470561 Helianthus annuus HOM05D000015 ORTHO05D009146 4.2e-06 55.5 56 51.8
GSVIVG01004808001 Vitis vinifera HOM05D000015 ORTHO05D009146 4.2e-06 55.5 77 44.2
ECA236G1637 Erigeron canadensis HOM05D000015 ORTHO05D009146 9.4e-06 54.3 55 50.9


User provided reference genes

Program Settings