Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 1.2e-170 603.2 323 100.0
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 2.5e-141 505.8 323 80.8
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 1.0e-105 387.5 324 62.0
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 6.1e-103 378.3 343 59.8
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 5.2e-102 375.2 303 63.0
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 2.6e-101 372.9 326 59.5
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 1.4e-99 367.1 327 62.1
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 1.7e-97 360.1 314 60.8
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 1.9e-96 356.7 322 57.8
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 5.5e-96 355.1 322 57.5
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 1.2e-95 354.0 338 58.0
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 2.7e-95 352.8 328 57.3
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 2.7e-95 352.8 320 64.4
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 3.6e-95 352.4 328 57.9
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 4.7e-95 352.1 343 55.4
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.8e-94 350.1 316 57.6
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 2.3e-94 349.7 345 60.0
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 4.0e-94 349.0 339 56.6
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 4.0e-94 349.0 328 53.7
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 4.0e-94 349.0 330 60.3
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 5.2e-94 348.6 317 57.4
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 6.8e-94 348.2 323 60.4
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 8.8e-94 347.8 315 57.1
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 2.0e-93 346.7 339 57.5
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 3.4e-93 345.9 334 56.0
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 7.5e-93 344.7 314 60.8
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 7.5e-93 344.7 322 58.7
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 9.8e-93 344.4 327 56.3
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 9.8e-93 344.4 341 59.8
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 9.8e-93 344.4 322 58.4
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 2.8e-92 342.8 333 62.2
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 3.7e-92 342.4 325 56.0
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 1.1e-91 340.9 302 57.9
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.4e-91 340.5 362 54.4
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 1.8e-91 340.1 316 57.3
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 4.1e-91 339.0 352 55.7
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 5.4e-91 338.6 359 54.6
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 5.4e-91 338.6 336 56.5
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 5.4e-91 338.6 330 56.4
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 9.1e-91 337.8 331 57.1
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 1.2e-90 337.4 335 56.1
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 7.7e-90 334.7 328 60.7
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 2.3e-89 333.2 310 51.3
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 3.8e-89 332.4 306 56.9
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 6.5e-89 331.6 327 55.7
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 8.6e-89 331.3 327 53.8
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 1.5e-88 330.5 324 56.5
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 1.9e-88 330.1 386 48.7
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 2.5e-88 329.7 310 51.0
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 5.5e-88 328.6 366 50.5
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 9.5e-88 327.8 333 53.2
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 2.8e-87 326.2 317 53.6
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 3.6e-87 325.9 329 51.7
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 1.0e-86 324.3 328 58.2
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 5.2e-86 322.0 319 54.9
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 8.9e-86 321.2 336 53.3
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 1.2e-85 320.9 326 58.0
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 1.2e-85 320.9 322 59.3
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 1.5e-85 320.5 322 51.9
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 5.7e-85 318.5 324 54.3
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 7.5e-85 318.2 343 54.2
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 2.8e-84 316.2 318 56.3
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 1.1e-83 314.3 329 57.8
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 3.1e-83 312.8 341 51.6
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 4.5e-82 308.9 370 49.2
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 1.0e-81 307.8 342 50.9
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 2.9e-81 306.2 347 46.1
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 6.6e-81 305.1 350 54.9
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 1.6e-79 300.4 268 57.8
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 3.0e-78 296.2 339 45.7
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 1.3e-76 290.8 345 49.3
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 1.3e-76 290.8 342 48.8
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 2.2e-76 290.0 345 49.3
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 2.2e-76 290.0 344 50.9
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 3.7e-76 289.3 324 48.5
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 4.9e-76 288.9 345 49.3
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 8.3e-76 288.1 319 55.2
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 5.4e-75 285.4 319 56.4
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 5.4e-75 285.4 313 48.2
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 5.4e-75 285.4 331 55.3
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 7.0e-75 285.0 348 46.0
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 9.2e-75 284.6 334 54.5
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 9.2e-75 284.6 343 53.1
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 1.6e-74 283.9 341 54.0
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 2.0e-74 283.5 333 54.1
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 3.5e-74 282.7 318 55.0
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 1.3e-73 280.8 321 46.7
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.1e-72 277.7 301 51.2
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 1.5e-72 277.3 370 49.2
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 2.5e-72 276.6 367 51.0
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 1.2e-71 274.2 344 49.4
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 2.8e-71 273.1 378 49.2
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 8.0e-71 271.6 344 48.8
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 8.0e-71 271.6 344 48.8
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 8.0e-71 271.6 344 48.8
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.4e-70 270.8 317 44.8
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 1.8e-70 270.4 325 46.2
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 1.8e-70 270.4 344 48.8
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.3e-70 270.0 315 44.1
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.2e-68 263.5 315 43.5
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 9.2e-67 258.1 307 50.2
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 2.7e-66 256.5 312 44.2
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 6.0e-66 255.4 315 43.2
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.1e-64 251.1 257 58.8
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 1.4e-62 244.2 328 43.6
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 5.2e-62 242.3 316 43.7
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 7.1e-59 231.9 326 42.9
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 8.6e-57 224.9 318 41.2
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 5.8e-53 212.2 337 40.7
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 2.4e-51 206.8 125 72.8
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 1.1e-46 191.4 376 35.6
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 4.0e-46 189.5 269 49.8
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.2e-42 177.9 330 37.9
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 6.0e-42 175.6 158 59.5
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 6.0e-42 175.6 233 41.6
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 6.6e-41 172.2 115 63.5
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 3.1e-38 163.3 126 60.3
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 7.6e-37 158.7 189 51.9
Mapoly0014s0128 Marchantia polymorpha HOM05D006293 ORTHO05D007971 9.6e-32 141.7 324 34.0
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 1.2e-29 134.8 299 31.8
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 1.2e-29 134.8 299 31.1
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 8.4e-28 128.6 319 29.8
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 7.1e-27 125.6 163 40.5
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 2.4e-22 110.5 139 41.0
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 1.5e-21 107.8 324 29.9
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 2.5e-16 90.5 225 36.0
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 8.2e-15 85.5 103 40.8
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 6.1e-10 69.3 56 51.8
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 5.7e-08 62.8 154 29.9


User provided reference genes

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