Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004834 Sechium edule HOM05D004031 ORTHO05D011186 2.7e-39 164.9 83 100.0
Sed0024429 Sechium edule HOM05D004031 ORTHO05D011186 1.2e-13 79.7 66 66.7
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 9.8e-13 76.6 66 63.6
MELO3C009606.2 Cucumis melo HOM05D004031 ORTHO05D011186 2.2e-12 75.5 71 57.7
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 3.8e-09 64.7 69 50.7
RcHm_v2.0_Chr3g0479131 Rosa chinensis HOM05D004031 ORTHO05D011186 1.5e-08 62.8 67 55.2
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 2.5e-08 62.0 71 46.5
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 3.2e-08 61.6 61 52.5
Eucgr.K01857 Eucalyptus grandis HOM05D004031 ORTHO05D011186 4.2e-08 61.2 59 57.6
MD12G1054200 Malus domestica HOM05D004031 ORTHO05D011186 4.2e-08 61.2 71 50.7
GSVIVG01033459001 Vitis vinifera HOM05D004031 ORTHO05D011186 4.2e-08 61.2 67 53.7
CDE05G3199 Ceratophyllum demersum HOM05D004031 ORTHO05D011186 7.2e-08 60.5 63 52.4
Gohir.A01G137400 Gossypium hirsutum HOM05D004031 ORTHO05D011186 7.2e-08 60.5 67 52.2
Gohir.D01G124600 Gossypium hirsutum HOM05D004031 ORTHO05D011186 7.2e-08 60.5 67 52.2
Medtr7g093770 Medicago truncatula HOM05D004031 ORTHO05D011186 1.2e-07 59.7 61 52.5
Potri.016G060550 Populus trichocarpa HOM05D004031 ORTHO05D011186 1.2e-07 59.7 59 54.2
Prupe.7G082600 Prunus persica HOM05D004031 ORTHO05D011186 1.2e-07 59.7 58 55.2
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 1.6e-07 59.3 66 48.5
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 1.6e-07 59.3 66 48.5
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 1.6e-07 59.3 64 50.0
Thecc.05G176000 Theobroma cacao HOM05D004031 ORTHO05D011186 1.6e-07 59.3 67 52.2
Glyma.19G150500 Glycine max HOM05D004031 ORTHO05D011186 2.1e-07 58.9 60 53.3
CSS0013106 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D011186 2.7e-07 58.5 63 49.2
Manes.09G038400 Manihot esculenta HOM05D004031 ORTHO05D011186 3.6e-07 58.2 65 50.8
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 3.6e-07 58.2 65 46.2
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 4.7e-07 57.8 76 40.8
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 6.1e-07 57.4 76 40.8
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 6.1e-07 57.4 59 54.2
Duzib128G0401 Durio zibethinus HOM05D004031 ORTHO05D011186 6.1e-07 57.4 72 48.6
Nn7g35951 Nelumbo nucifera HOM05D004031 ORTHO05D011186 6.1e-07 57.4 63 52.4
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 1.0e-06 56.6 65 44.6
Lj1g0020490 Lotus japonicus HOM05D004031 ORTHO05D011186 1.0e-06 56.6 63 47.6
Lalb_Chr15g0079141 Lupinus albus HOM05D004031 ORTHO05D011186 1.4e-06 56.2 66 50.0
Phvul.001G144800 Phaseolus vulgaris HOM05D004031 ORTHO05D011186 1.4e-06 56.2 60 50.0
A03p37430 Brassica napus HOM05D004031 ORTHO05D011186 1.8e-06 55.8 65 44.6
Migut.J01860 Erythranthe guttata HOM05D004031 ORTHO05D011186 3.0e-06 55.1 59 45.8
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 4.0e-06 54.7 77 40.3
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 5.2e-06 54.3 76 39.5
Nitab4.5_0000009g0260 Nicotiana tabacum HOM05D004031 ORTHO05D011186 5.2e-06 54.3 59 49.2
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 5.2e-06 54.3 59 49.2
CiPaw.09G027900 Carya illinoinensis HOM05D004031 ORTHO05D011186 6.8e-06 53.9 57 50.9


User provided reference genes

Program Settings