Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 1.3e-235 819.3 398 100.0
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 2.5e-199 698.7 395 86.8
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 4.7e-198 694.5 395 86.1
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 5.1e-192 674.5 427 78.9
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 1.8e-112 410.2 443 49.2
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 8.9e-112 407.9 420 51.4
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 9.8e-111 404.4 404 53.0
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 2.0e-108 396.7 426 50.0
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 2.9e-107 392.9 419 50.1
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 2.1e-105 386.7 419 48.7
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 2.1e-105 386.7 406 49.8
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 8.0e-105 384.8 406 49.0
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.0e-104 384.4 405 49.4
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 8.9e-104 381.3 430 47.4
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 1.5e-103 380.6 403 50.6
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.5e-103 380.6 403 50.6
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 2.6e-103 379.8 394 50.5
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 3.4e-103 379.4 403 50.9
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 9.8e-103 377.9 400 49.0
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 3.7e-102 375.9 421 48.9
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 3.7e-102 375.9 421 48.9
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 3.7e-102 375.9 393 50.4
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 1.1e-101 374.4 403 49.6
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 1.4e-101 374.0 395 49.4
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 7.8e-100 368.2 420 46.0
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 7.8e-100 368.2 405 49.4
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 1.0e-99 367.9 415 47.5
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.3e-99 367.5 404 48.8
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 2.3e-99 366.7 420 46.7
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 3.0e-99 366.3 404 48.3
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 8.6e-99 364.8 420 46.0
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 1.9e-98 363.6 402 46.8
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 2.1e-97 360.1 413 47.2
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 3.6e-97 359.4 412 45.6
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 8.9e-96 354.8 419 45.8
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 8.9e-96 354.8 352 52.6
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 2.0e-95 353.6 398 48.0
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 3.4e-95 352.8 406 47.8
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 5.8e-95 352.1 398 48.5
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 9.8e-95 351.3 417 46.3
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.3e-94 350.9 405 46.9
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 1.7e-94 350.5 420 44.0
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 2.9e-94 349.7 416 44.5
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 5.4e-93 345.5 429 45.5
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 7.1e-93 345.1 421 43.9
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 6.0e-92 342.0 412 45.9
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 2.5e-90 336.7 410 45.4
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 1.6e-89 334.0 423 44.9
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 2.8e-89 333.2 442 42.5
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 1.4e-88 330.9 417 45.1
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 9.9e-87 324.7 398 45.0
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 1.1e-85 321.2 424 43.2
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 3.2e-85 319.7 402 44.5
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 1.2e-84 317.8 403 42.7
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 1.6e-84 317.4 405 44.2
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 1.6e-84 317.4 369 46.6
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 1.3e-83 314.3 398 43.7
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 3.0e-83 313.2 404 44.1
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 9.6e-82 308.1 404 42.8
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 2.1e-81 307.0 451 41.7
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 2.8e-81 306.6 414 42.0
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 2.8e-81 306.6 420 42.9
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 5.2e-80 302.4 422 43.6
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 8.9e-80 301.6 397 42.6
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 2.6e-79 300.1 367 47.1
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 5.8e-79 298.9 393 43.0
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 2.2e-78 297.0 395 40.8
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 1.1e-77 294.7 416 41.1
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 1.1e-77 294.7 395 42.0
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 4.2e-77 292.7 397 41.8
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 9.3e-77 291.6 402 40.3
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 3.5e-76 289.7 396 40.9
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 1.7e-75 287.3 407 40.5
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 1.7e-75 287.3 396 41.9
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 2.3e-75 287.0 402 41.3
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 3.9e-75 286.2 401 40.4
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 5.1e-75 285.8 395 41.5
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 5.1e-75 285.8 395 41.5
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 1.5e-74 284.3 393 42.2
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 4.3e-74 282.7 396 40.7
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 7.3e-74 282.0 395 40.3
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 7.3e-74 282.0 395 39.5
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 9.6e-74 281.6 395 40.3
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 1.3e-73 281.2 393 40.5
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 2.1e-73 280.4 397 41.6
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 2.8e-73 280.0 395 40.3
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 2.8e-73 280.0 395 40.3
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 8.1e-73 278.5 395 40.0
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 4.9e-70 269.2 419 38.2
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 2.4e-69 266.9 381 40.4
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 6.0e-68 262.3 398 39.9
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 4.3e-66 256.1 422 36.7
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 1.1e-64 251.5 439 37.1
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 3.4e-63 246.5 395 39.0
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 4.5e-63 246.1 239 49.8
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 1.7e-62 244.2 397 36.5
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 3.8e-62 243.0 448 35.3
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 6.7e-59 232.3 412 36.4
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 5.8e-55 219.2 395 33.7
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 7.4e-50 202.2 191 51.3
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 1.5e-39 167.9 456 26.3
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 2.2e-38 164.1 143 57.3
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 1.1e-37 161.8 134 57.5
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 7.2e-37 159.1 163 50.3
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 4.6e-36 156.4 129 58.1
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 6.3e-33 146.0 391 29.7
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 7.7e-31 139.0 453 24.9
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 1.1e-24 118.6 398 23.6
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 2.0e-23 114.4 75 65.3
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 1.0e-22 112.1 343 26.2
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 9.4e-21 105.5 122 45.1
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 2.2e-17 94.4 308 25.6
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 1.2e-10 72.0 73 45.2
TAR629G1149 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.1e-08 65.5 78 44.9
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 7.7e-07 59.3 43 65.1


User provided reference genes

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