Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004804 Sechium edule HOM05D005672 ORTHO05D003038 2.0e-62 242.3 123 100.0
CsaV3_7G033060 Cucumis sativus L. HOM05D005672 ORTHO05D003038 3.9e-34 148.3 102 68.6
ClCG09G002230 Citrullus lanatus HOM05D005672 ORTHO05D003038 1.9e-33 146.0 109 67.0
MELO3C023361.2 Cucumis melo HOM05D005672 ORTHO05D003038 2.5e-33 145.6 101 67.3
ClCG09G002260 Citrullus lanatus HOM05D005672 ORTHO05D003038 1.6e-19 99.8 86 52.3
ClCG09G002270 Citrullus lanatus HOM05D005672 ORTHO05D003038 1.4e-18 96.7 104 47.1
QL05p025003 Quercus lobata HOM05D005672 ORTHO05D003038 1.7e-13 79.7 81 45.7
Manes.04G122400 Manihot esculenta HOM05D005672 ORTHO05D003038 5.0e-13 78.2 98 37.8
Prupe.3G072900 Prunus persica HOM05D005672 ORTHO05D003038 3.2e-12 75.5 98 39.8
Actinidia32765 Actinidia chinensis HOM05D005672 ORTHO05D003038 5.5e-12 74.7 88 42.0
FAN05G0478 Fragaria x ananassa HOM05D005672 ORTHO05D003038 1.2e-11 73.6 102 37.3
Actinidia01798 Actinidia chinensis HOM05D005672 ORTHO05D003038 3.6e-11 72.0 82 41.5
Manes.04G122300 Manihot esculenta HOM05D005672 ORTHO05D003038 3.6e-11 72.0 99 37.4
Sed0004960 Sechium edule HOM05D005672 ORTHO05D003038 3.6e-11 72.0 96 39.6
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 6.1e-11 71.2 81 43.2
Manes.04G122200 Manihot esculenta HOM05D005672 ORTHO05D003038 6.1e-11 71.2 99 37.4
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.0e-10 70.5 81 43.2
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 1.0e-10 70.5 100 37.0
ClCG09G002250 Citrullus lanatus HOM05D005672 ORTHO05D003038 2.3e-10 69.3 59 55.9
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 2.3e-10 69.3 102 37.3
Hund25654 Selenicereus undatus HOM05D005672 ORTHO05D003038 6.7e-10 67.8 99 40.4
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 6.7e-10 67.8 83 36.1
Sed0001381 Sechium edule HOM05D005672 ORTHO05D003038 2.0e-09 66.2 82 42.7
PGR102G1467 Punica granatum HOM05D005672 ORTHO05D003038 7.4e-09 64.3 92 33.7
Lsat_1_v5_gn_5_129980 Lactuca sativa HOM05D005672 ORTHO05D003038 1.3e-08 63.5 85 37.6
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 3.7e-08 62.0 81 35.8
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 4.8e-08 61.6 81 35.8
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 4.8e-08 61.6 81 35.8
Gohir.A09G083700 Gossypium hirsutum HOM05D005672 ORTHO05D003038 6.3e-08 61.2 82 36.6
Gorai.006G099200 Gossypium raimondii HOM05D005672 ORTHO05D003038 6.3e-08 61.2 107 32.7
Gohir.D09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 8.2e-08 60.8 107 32.7
Sopen06g025030 Solanum pennellii HOM05D005672 ORTHO05D003038 8.2e-08 60.8 82 36.6
MSTRG.22696 Avicennia marina HOM05D005672 ORTHO05D003038 1.4e-07 60.1 81 37.0
Nitab4.5_0000351g0210 Nicotiana tabacum HOM05D005672 ORTHO05D003038 1.4e-07 60.1 101 34.7
PGSC0003DMG400016538 Solanum tuberosum HOM05D005672 ORTHO05D003038 1.4e-07 60.1 82 36.6
THA.LOC104823572 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 1.8e-07 59.7 100 32.0
Atru.chr1.3245 Acer truncatum HOM05D005672 ORTHO05D003038 2.4e-07 59.3 80 36.2
CAN.G395.17 Capsicum annuum HOM05D005672 ORTHO05D003038 2.4e-07 59.3 85 35.3
DCAR_026309 Daucus carota HOM05D005672 ORTHO05D003038 2.4e-07 59.3 88 36.4
Peaxi162Scf00015g00326 Petunia axillaris HOM05D005672 ORTHO05D003038 2.4e-07 59.3 99 31.3
Actinidia14259 Actinidia chinensis HOM05D005672 ORTHO05D003038 3.1e-07 58.9 99 33.3
Migut.I00857 Erythranthe guttata HOM05D005672 ORTHO05D003038 3.1e-07 58.9 88 34.1
Nn2g11778 Nelumbo nucifera HOM05D005672 ORTHO05D003038 3.1e-07 58.9 83 37.3
Solyc06g066750.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 3.1e-07 58.9 106 33.0
SalBow2G2205 Salvia bowleyana HOM05D005672 ORTHO05D003038 5.3e-07 58.2 81 35.8
Actinidia02490 Actinidia chinensis HOM05D005672 ORTHO05D003038 7.0e-07 57.8 99 34.3
Manes.04G121900 Manihot esculenta HOM05D005672 ORTHO05D003038 1.2e-06 57.0 65 40.0
Manes.04G122000 Manihot esculenta HOM05D005672 ORTHO05D003038 1.2e-06 57.0 65 40.0
Manes.04G122100 Manihot esculenta HOM05D005672 ORTHO05D003038 1.2e-06 57.0 65 40.0
Nitab4.5_0002327g0030 Nicotiana tabacum HOM05D005672 ORTHO05D003038 1.2e-06 57.0 103 34.0
SGA_v2.0_scaffold5G02600 Striga asiatica HOM05D005672 ORTHO05D003038 2.6e-06 55.8 86 32.6
ClCG09G002220 Citrullus lanatus HOM05D005672 ORTHO05D003038 3.4e-06 55.5 75 38.7
Sp1g11250 Schrenkiella parvula HOM05D007482 ORTHO05D003038 7.7e-06 54.3 90 33.3


User provided reference genes

Program Settings