Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004781 Sechium edule HOM05D007646 ORTHO05D004022 6.4e-78 293.9 137 100.0
ClCG05G010760 Citrullus lanatus HOM05D007646 ORTHO05D004022 2.6e-55 218.8 138 78.3
Cpa.g.sc116.10 Carica papaya HOM05D007646 ORTHO05D004022 1.8e-43 179.5 140 64.3
CiPaw.03G067200 Carya illinoinensis HOM05D007646 ORTHO05D004022 5.1e-43 177.9 125 65.6
Haze_14207 Corylus avellana HOM05D007646 ORTHO05D004022 1.3e-41 173.3 117 70.1
GSVIVG01030896001 Vitis vinifera HOM05D007646 ORTHO05D004022 2.2e-41 172.6 118 69.5
Manes.02G073800 Manihot esculenta HOM05D007646 ORTHO05D004022 2.8e-41 172.2 110 75.5
Ciclev10013088m.g Citrus clementina HOM05D007646 ORTHO05D004022 3.7e-41 171.8 98 78.6
Eucgr.F02813 Eucalyptus grandis HOM05D007646 ORTHO05D004022 3.7e-41 171.8 107 73.8
Prupe.3G151500 Prunus persica HOM05D007646 ORTHO05D004022 8.2e-41 170.6 127 65.4
TAR629G1988 Trochodendron aralioides HOM05D007646 ORTHO05D004022 8.2e-41 170.6 118 69.5
Potri.017G122500 Populus trichocarpa HOM05D007646 ORTHO05D004022 1.8e-40 169.5 98 76.5
vmacro05494 Vaccinium macrocarpon HOM05D007646 ORTHO05D004022 2.4e-40 169.1 90 83.3
Lj1g0016280 Lotus japonicus HOM05D007646 ORTHO05D004022 5.3e-40 167.9 124 63.7
Glyma.02G091100 Glycine max HOM05D007646 ORTHO05D004022 9.1e-40 167.2 124 62.9
TPR.G28547 Trifolium pratense HOM05D007646 ORTHO05D004022 1.2e-39 166.8 87 83.9
FvH4_4g24890 Fragaria vesca HOM05D007646 ORTHO05D004022 1.5e-39 166.4 101 76.2
FAN07G2610 Fragaria x ananassa HOM05D007646 ORTHO05D004022 1.5e-39 166.4 101 76.2
FAN17G0138 Fragaria x ananassa HOM05D007646 ORTHO05D004022 1.5e-39 166.4 101 76.2
THA.LOC104822453 Tarenaya hassleriana HOM05D007646 ORTHO05D004022 2.0e-39 166.0 113 66.4
Atru.chr1.1768 Acer truncatum HOM05D007646 ORTHO05D004022 2.6e-39 165.6 138 62.3
Migut.L00480 Erythranthe guttata HOM05D007646 ORTHO05D004022 2.6e-39 165.6 119 64.7
VMungo1383G0770 Vigna mungo HOM05D007646 ORTHO05D004022 2.6e-39 165.6 126 62.7
Aa31LG9G17280 Aethionema arabicum HOM05D004323 ORTHO05D004022 3.4e-39 165.2 122 65.6
FAN12G1679 Fragaria x ananassa HOM05D007646 ORTHO05D004022 3.4e-39 165.2 101 75.2
Thecc.04G124000 Theobroma cacao HOM05D007646 ORTHO05D004022 3.4e-39 165.2 84 83.3
arahy.Tifrunner.gnm1.ann1.27TPXA Arachis hypogaea HOM05D007646 ORTHO05D004022 4.5e-39 164.9 115 67.8
arahy.Tifrunner.gnm1.ann1.FGX6FG Arachis hypogaea HOM05D007646 ORTHO05D004022 4.5e-39 164.9 115 67.8
Gohir.A07G075950 Gossypium hirsutum HOM05D007646 ORTHO05D004022 4.5e-39 164.9 118 64.4
Manes.01G114800 Manihot esculenta HOM05D007646 ORTHO05D004022 4.5e-39 164.9 133 60.2
BcaB02g08021 Brassica carinata HOM05D007646 ORTHO05D004022 5.9e-39 164.5 128 63.3
Cc07_g08290 Coffea canephora HOM05D007646 ORTHO05D004022 5.9e-39 164.5 110 70.9
Thhalv10027987m.g Eutrema salsugineum HOM05D007646 ORTHO05D004022 5.9e-39 164.5 117 67.5
Gohir.D07G080400 Gossypium hirsutum HOM05D007646 ORTHO05D004022 5.9e-39 164.5 118 64.4
Gorai.001G085500 Gossypium raimondii HOM05D007646 ORTHO05D004022 5.9e-39 164.5 118 64.4
Rhsim10G0078400 Rhododendron simsii HOM05D007646 ORTHO05D004022 7.7e-39 164.1 79 86.1
TWI77G0633 Tripterygium wilfordii HOM05D007646 ORTHO05D004022 1.0e-38 163.7 100 76.0
HanXRQChr12g0375971 Helianthus annuus HOM05D007646 ORTHO05D004022 1.3e-38 163.3 120 64.2
Hma1.2p1_0283F.1_g113630 Hydrangea macrophylla HOM05D007646 ORTHO05D004022 3.8e-38 161.8 132 59.8
Duzib133G1094 Durio zibethinus HOM05D007646 ORTHO05D004022 5.0e-38 161.4 83 81.9
QL07p035402 Quercus lobata HOM05D007646 ORTHO05D004022 5.0e-38 161.4 87 78.2
Sp7g04020 Schrenkiella parvula HOM05D007646 ORTHO05D004022 5.0e-38 161.4 131 60.3
Lsat_1_v5_gn_3_83021 Lactuca sativa HOM05D007646 ORTHO05D004022 6.5e-38 161.0 80 85.0
Psat3g096480 Pisum sativum HOM05D007646 ORTHO05D004022 6.5e-38 161.0 130 62.3
Solyc02g063300.3 Solanum lycopersicum HOM05D007646 ORTHO05D004022 6.5e-38 161.0 113 66.4
Sopen02g014370 Solanum pennellii HOM05D007646 ORTHO05D004022 6.5e-38 161.0 113 66.4
Phvul.008G009900 Phaseolus vulgaris HOM05D007646 ORTHO05D004022 8.5e-38 160.6 123 61.0
EL10Ac2g04503 Beta vulgaris HOM05D007646 ORTHO05D004022 1.1e-37 160.2 127 59.8
RcHm_v2.0_Chr3g0493581 Rosa chinensis HOM05D007646 ORTHO05D004022 1.1e-37 160.2 107 72.0
Aqoxy3G00145 Aquilegia oxysepala HOM05D007646 ORTHO05D004022 1.9e-37 159.5 111 69.4
Lalb_Chr10g0091581 Lupinus albus HOM05D007646 ORTHO05D004022 2.5e-37 159.1 99 74.7
Cfa007863 Carpinus fangiana HOM05D007646 ORTHO05D004022 3.2e-37 158.7 142 59.2
PGSC0003DMG400010412 Solanum tuberosum HOM05D007646 ORTHO05D004022 3.2e-37 158.7 87 78.2
SGA_v2.0_scaffold329G48872 Striga asiatica HOM05D007646 ORTHO05D004022 5.5e-37 157.9 80 82.5
ATR0326G025 Amborella trichopoda HOM05D007646 ORTHO05D004022 9.4e-37 157.1 125 61.6
Hund13692 Selenicereus undatus HOM05D007646 ORTHO05D004022 1.2e-36 156.8 98 71.4
PSO017G6311 Papaver somniferum HOM05D007646 ORTHO05D004022 1.6e-36 156.4 123 63.4
AL7G52880 Arabidopsis lyrata HOM05D007646 ORTHO05D004022 2.1e-36 156.0 114 63.2
AT5G38060 Arabidopsis thaliana HOM05D007646 ORTHO05D004022 2.1e-36 156.0 114 64.0
CANSAT54G0187 Cannabis sativa HOM05D007646 ORTHO05D004022 2.1e-36 156.0 80 82.5
Carub.0005s1235 Capsella rubella HOM05D007646 ORTHO05D004022 2.7e-36 155.6 115 62.6
CARHR214680 Cardamine hirsuta HOM05D007646 ORTHO05D004022 2.7e-36 155.6 89 73.0
Sc11g0008560 Simmondsia chinensis HOM05D007646 ORTHO05D004022 2.7e-36 155.6 100 71.0
BcaC08g44354 Brassica carinata HOM05D007646 ORTHO05D004022 3.6e-36 155.2 93 75.3
MSTRG.3534 Avicennia marina HOM05D007646 ORTHO05D004022 6.1e-36 154.5 105 67.6
BolC6t36994H Brassica oleracea HOM05D007646 ORTHO05D004022 7.9e-36 154.1 93 74.2
HPP92_011530 Vanilla planifolia HOM05D007646 ORTHO05D004022 1.0e-35 153.7 128 58.6
BraA07t29660Z Brassica rapa HOM05D007646 ORTHO05D004022 1.8e-35 152.9 110 61.8
PSO478G0345 Papaver somniferum HOM05D007646 ORTHO05D004022 1.8e-35 152.9 78 82.1
Zm00001eb042800 Zea mays HOM05D007646 ORTHO05D004022 1.8e-35 152.9 80 80.0
DCAR_010731 Daucus carota HOM05D007646 ORTHO05D004022 2.3e-35 152.5 119 63.9
Os08g0364500 Oryza sativa ssp. japonica HOM05D007646 ORTHO05D004022 6.7e-35 151.0 81 76.5
CDE06G1656 Ceratophyllum demersum HOM05D007646 ORTHO05D004022 1.5e-34 149.8 136 56.6
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 4.4e-34 148.3 71 87.3
SEGI_34374 Sequoiadendron giganteum HOM05D007646 ORTHO05D004022 2.2e-33 146.0 91 73.6
Pp3c20_8520 Physcomitrium patens HOM05D007646 ORTHO05D004022 3.7e-33 145.2 113 58.4
A07p19560 Brassica napus HOM05D007646 ORTHO05D004022 5.3e-32 141.4 133 51.9
C06p17970 Brassica napus HOM05D007646 ORTHO05D004022 9.1e-32 140.6 121 57.9
Mapoly0026s0130 Marchantia polymorpha HOM05D007646 ORTHO05D004022 1.2e-31 140.2 84 71.4
Nitab4.5_0000036g0620 Nicotiana tabacum HOM05D007646 ORTHO05D004022 3.8e-30 135.2 83 72.3
Sabra17G0101300 Salix brachista HOM05D007646 ORTHO05D004022 1.1e-29 133.7 185 42.2
Sabra17G0103900 Salix brachista HOM05D007646 ORTHO05D004022 1.4e-29 133.3 186 41.9
SMO270G0036 Selaginella moellendorffii HOM05D007646 ORTHO05D004022 2.5e-29 132.5 80 70.0
Medtr7g082970 Medicago truncatula HOM05D007646 ORTHO05D004022 1.6e-28 129.8 203 39.9
AagrBONN_evm.TU.Sc2ySwM_117.3189 Anthoceros agrestis HOM05D007646 ORTHO05D004022 1.0e-27 127.1 127 51.2
CBR_g4014 Chara braunii HOM05D007646 ORTHO05D004022 1.0e-27 127.1 111 51.4
CsaV3_3G017630 Cucumis sativus L. HOM05D007646 ORTHO05D004022 5.3e-24 114.8 51 92.2
CSS0015077 Camellia sinensis var. sinensis HOM05D007646 ORTHO05D004022 1.6e-23 113.2 50 94.0
Ah.16g101400 Amaranthus hybridus HOM05D007646 ORTHO05D004022 7.7e-23 110.9 54 81.5
MBI10_g07293_MAGBIO Magnolia biondii HOM05D007646 ORTHO05D004022 2.2e-22 109.4 51 88.2
Peaxi162Scf00343g00059 Petunia axillaris HOM05D007646 ORTHO05D004022 6.5e-22 107.8 50 88.0
MELO3C020311.2 Cucumis melo HOM05D007646 ORTHO05D004022 5.7e-18 94.7 87 64.4
Nn4g24089 Nelumbo nucifera HOM05D007646 ORTHO05D004022 1.1e-16 90.5 87 52.9
ECA246G1632 Erigeron canadensis HOM05D007646 ORTHO05D004022 1.2e-12 77.0 34 85.3
Eucgr.A02986 Eucalyptus grandis HOM05D007710 ORTHO05D004022 2.0e-10 69.7 79 41.8
BraA07t30900Z Brassica rapa HOM05D007710 ORTHO05D004022 1.7e-09 66.6 79 39.2
Pp3c5_4790 Physcomitrium patens HOM05D007710 ORTHO05D004022 2.8e-09 65.9 81 39.5
Nn3g18065 Nelumbo nucifera HOM05D007646 ORTHO05D004022 3.7e-09 65.5 69 55.1
A07p32740 Brassica napus HOM05D007710 ORTHO05D004022 4.8e-09 65.1 79 38.0
PGR042G1372 Punica granatum HOM05D007710 ORTHO05D004022 4.8e-09 65.1 80 40.0
BolC6t38987H Brassica oleracea HOM05D007710 ORTHO05D004022 6.3e-09 64.7 85 40.0
EL10Ac3g05053 Beta vulgaris HOM05D007710 ORTHO05D004022 8.3e-09 64.3 82 39.0
Actinidia08760 Actinidia chinensis HOM05D007710 ORTHO05D004022 1.8e-08 63.2 80 40.0
BcaB03g15335 Brassica carinata HOM05D007710 ORTHO05D004022 1.8e-08 63.2 79 38.0
CARHR056450 Cardamine hirsuta HOM05D007710 ORTHO05D004022 4.1e-08 62.0 83 34.9
C06p38950 Brassica napus HOM05D007710 ORTHO05D004022 5.4e-08 61.6 84 35.7
Mapoly0120s0048 Marchantia polymorpha HOM05D007710 ORTHO05D004022 5.4e-08 61.6 79 40.5
Lsat_1_v5_gn_2_60801 Lactuca sativa HOM05D007710 ORTHO05D004022 7.0e-08 61.2 79 40.5
Sp5g19360 Schrenkiella parvula HOM05D007710 ORTHO05D004022 7.0e-08 61.2 79 36.7
Aa31LG2G2200 Aethionema arabicum HOM05D007710 ORTHO05D004022 1.2e-07 60.5 79 36.7
Prupe.2G328300 Prunus persica HOM05D007710 ORTHO05D004022 2.0e-07 59.7 79 38.0
ATR0057G097 Amborella trichopoda HOM05D007710 ORTHO05D004022 3.5e-07 58.9 85 37.6
AL2G19620 Arabidopsis lyrata HOM05D007710 ORTHO05D004022 3.5e-07 58.9 83 34.9
ECA233G0318 Erigeron canadensis HOM05D007710 ORTHO05D004022 3.5e-07 58.9 79 38.0
Cc02_g00160 Coffea canephora HOM05D007710 ORTHO05D004022 4.5e-07 58.5 81 33.3
Potri.013G078866 Populus trichocarpa HOM05D007710 ORTHO05D004022 5.9e-07 58.2 79 39.2
TAR375G0377 Trochodendron aralioides HOM05D007710 ORTHO05D004022 5.9e-07 58.2 79 36.7
Aqoxy3G02299 Aquilegia oxysepala HOM05D007710 ORTHO05D004022 7.7e-07 57.8 79 35.4
CiPaw.06G035400 Carya illinoinensis HOM05D007710 ORTHO05D004022 7.7e-07 57.8 88 34.1
Duzib128G0150 Durio zibethinus HOM05D007710 ORTHO05D004022 7.7e-07 57.8 83 34.9
CSS0005120 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 1.0e-06 57.4 79 36.7
CSS0038916 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 1.0e-06 57.4 79 36.7
Cre13.g605700 Chlamydomonas reinhardtii HOM05D007646 ORTHO05D004022 1.0e-06 57.4 89 33.7
Haze_00383 Corylus avellana HOM05D007710 ORTHO05D004022 1.0e-06 57.4 88 34.1
PSO782G0287 Papaver somniferum HOM05D007710 ORTHO05D004022 1.0e-06 57.4 79 36.7
THA.LOC104805715 Tarenaya hassleriana HOM05D007710 ORTHO05D004022 1.0e-06 57.4 79 35.4
AT1G65000 Arabidopsis thaliana HOM05D007710 ORTHO05D004022 1.3e-06 57.0 83 33.7
FvH4_7g34150 Fragaria vesca HOM05D007710 ORTHO05D004022 1.3e-06 57.0 84 34.5
Nitab4.5_0004530g0090 Nicotiana tabacum HOM05D007710 ORTHO05D004022 1.3e-06 57.0 88 34.1
CARHR057330 Cardamine hirsuta HOM05D007710 ORTHO05D004022 1.7e-06 56.6 83 33.7
HanXRQChr04g0105361 Helianthus annuus HOM05D007710 ORTHO05D004022 1.7e-06 56.6 77 37.7
SMO347G0449 Selaginella moellendorffii HOM05D007710 ORTHO05D004022 1.7e-06 56.6 79 36.7
Cfa016067 Carpinus fangiana HOM05D003442 ORTHO05D004005 2.3e-06 56.2 101 31.7
RcHm_v2.0_Chr1g0384511 Rosa chinensis HOM05D007710 ORTHO05D004022 2.3e-06 56.2 79 36.7
unitig_747.g21335 Utricularia gibba HOM05D007710 ORTHO05D004022 2.3e-06 56.2 127 28.3
unitig_748.g8495 Utricularia gibba HOM05D007646 ORTHO05D004022 2.3e-06 56.2 40 65.0
CAN.G1131.30 Capsicum annuum HOM05D007710 ORTHO05D004022 2.9e-06 55.8 79 34.2
DCAR_009023 Daucus carota HOM05D007710 ORTHO05D004022 2.9e-06 55.8 79 36.7
FAN03G2015 Fragaria x ananassa HOM05D007710 ORTHO05D004022 2.9e-06 55.8 84 34.5
Nitab4.5_0000021g0800 Nicotiana tabacum HOM05D007710 ORTHO05D004022 2.9e-06 55.8 88 33.0
Atru.chr12.1914 Acer truncatum HOM05D007710 ORTHO05D004022 3.8e-06 55.5 79 35.4
AUR62028202 Chenopodium quinoa HOM05D007710 ORTHO05D004022 3.8e-06 55.5 79 34.2
Gohir.A13G101700 Gossypium hirsutum HOM05D007710 ORTHO05D004022 3.8e-06 55.5 83 33.7
PSO063G4155 Papaver somniferum HOM05D007710 ORTHO05D004022 3.8e-06 55.5 79 35.4
PGSC0003DMG400003164 Solanum tuberosum HOM05D007710 ORTHO05D004022 3.8e-06 55.5 89 32.6
PGSC0003DMG402026486 Solanum tuberosum HOM05D007710 ORTHO05D004022 3.8e-06 55.5 89 32.6
Hma1.2p1_0649F.1_g195220 Hydrangea macrophylla HOM05D007710 ORTHO05D004022 5.0e-06 55.1 77 36.4
Hund09805 Selenicereus undatus HOM05D007710 ORTHO05D004022 5.0e-06 55.1 79 36.7
Glyma.12G016700 Glycine max HOM05D007710 ORTHO05D004022 6.6e-06 54.7 79 35.4
Peaxi162Scf00516g00641 Petunia axillaris HOM05D007710 ORTHO05D004022 6.6e-06 54.7 79 34.2
TWI32G0404 Tripterygium wilfordii HOM05D007710 ORTHO05D004022 8.6e-06 54.3 79 35.4


User provided reference genes

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