Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 1.3e-55 219.5 114 100.0
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 7.3e-43 177.2 116 82.8
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 3.6e-42 174.9 120 80.0
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 1.8e-41 172.6 121 77.7
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 4.1e-30 134.8 104 73.1
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 1.2e-29 133.3 120 65.0
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 2.1e-29 132.5 122 63.9
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 2.1e-29 132.5 96 71.9
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 2.7e-29 132.1 96 71.9
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 6.0e-29 131.0 118 66.1
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 1.7e-28 129.4 120 64.2
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.7e-28 129.4 96 70.8
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 2.3e-28 129.0 114 61.4
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 3.9e-28 128.3 117 59.0
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 5.1e-28 127.9 116 62.9
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 5.1e-28 127.9 116 62.9
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 5.1e-28 127.9 99 68.7
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 6.6e-28 127.5 116 64.7
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 6.6e-28 127.5 116 62.9
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 8.6e-28 127.1 121 59.5
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 1.1e-27 126.7 107 66.4
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 1.1e-27 126.7 118 61.0
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 1.5e-27 126.3 113 65.5
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 1.5e-27 126.3 106 65.1
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 1.9e-27 125.9 96 70.8
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 2.5e-27 125.6 120 63.3
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 2.5e-27 125.6 120 63.3
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 3.3e-27 125.2 114 62.3
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 4.3e-27 124.8 98 69.4
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 5.6e-27 124.4 114 59.6
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 5.6e-27 124.4 76 80.3
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 5.6e-27 124.4 114 62.3
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 9.6e-27 123.6 95 67.4
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 1.2e-26 123.2 115 60.9
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 1.6e-26 122.9 120 63.3
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 2.8e-26 122.1 110 59.1
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 3.6e-26 121.7 124 58.1
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 4.7e-26 121.3 97 63.9
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 4.7e-26 121.3 98 65.3
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 6.2e-26 120.9 95 66.3
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 1.4e-25 119.8 96 67.7
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 1.8e-25 119.4 116 60.3
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 2.4e-25 119.0 110 60.0
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.4e-25 119.0 95 67.4
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 4.0e-25 118.2 100 64.0
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 5.2e-25 117.9 118 57.6
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 5.2e-25 117.9 100 61.0
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 3.4e-24 115.2 113 55.8
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 4.4e-24 114.8 121 56.2
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 5.8e-24 114.4 93 63.4
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 7.6e-24 114.0 110 56.4
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 9.9e-24 113.6 88 61.4
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 2.2e-23 112.5 113 54.9
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 2.2e-23 112.5 110 57.3
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 2.2e-23 112.5 112 58.9
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.8e-23 111.7 115 56.5
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 3.8e-23 111.7 93 65.6
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 3.8e-23 111.7 110 56.4
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 6.4e-23 110.9 68 73.5
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 1.1e-22 110.2 116 54.3
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 1.1e-22 110.2 116 59.5
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 1.9e-22 109.4 110 56.4
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 7.1e-22 107.5 72 70.8
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.6e-21 106.3 65 75.4
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 2.7e-21 105.5 112 55.4
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 4.6e-21 104.8 115 54.8
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 6.0e-21 104.4 113 56.6
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 1.0e-20 103.6 112 56.2
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 2.3e-20 102.4 72 70.8
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 3.0e-20 102.1 121 53.7
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 3.9e-20 101.7 108 52.8
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 6.6e-20 100.9 115 51.3
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 6.6e-20 100.9 75 69.3
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 8.7e-20 100.5 66 71.2
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 8.7e-20 100.5 100 52.0
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 8.7e-20 100.5 107 57.0
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 1.1e-19 100.1 112 54.5
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 1.9e-19 99.4 72 65.3
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 1.9e-19 99.4 78 61.5
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 1.9e-19 99.4 107 54.2
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 3.3e-19 98.6 114 51.8
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 4.3e-19 98.2 80 65.0
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 5.6e-19 97.8 120 55.8
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 5.6e-19 97.8 63 73.0
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 7.3e-19 97.4 105 51.4
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 9.6e-19 97.1 108 50.9
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 9.6e-19 97.1 105 50.5
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 1.3e-18 96.7 105 50.5
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 1.6e-18 96.3 119 52.9
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 3.6e-18 95.1 102 55.9
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 8.1e-18 94.0 94 52.1
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 2.4e-17 92.4 72 61.1
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 3.1e-17 92.0 124 48.4
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 4.0e-17 91.7 65 64.6
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 5.3e-17 91.3 110 48.2
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 5.3e-17 91.3 86 50.0
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 6.9e-17 90.9 104 51.9
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 6.9e-17 90.9 94 51.1
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 3.4e-16 88.6 101 54.5
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 3.4e-16 88.6 101 53.5
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 4.5e-16 88.2 123 49.6
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 3.8e-15 85.1 80 55.0
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 8.4e-15 84.0 101 50.5
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 2.1e-13 79.3 101 50.5
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 1.3e-12 76.6 71 57.7
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 1.8e-12 76.3 106 47.2
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.8e-12 76.3 80 47.5
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 1.8e-12 76.3 86 51.2
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 3.9e-12 75.1 101 43.6
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 3.9e-12 75.1 99 49.5
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.1e-10 69.3 80 43.8
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 1.5e-08 63.2 71 49.3
SEGI_16463 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 2.2e-07 59.3 55 56.4
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 2.9e-07 58.9 84 51.2
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 2.9e-07 58.9 111 44.1


User provided reference genes

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