Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 6.5e-96 354.0 171 100.0
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 7.0e-82 307.4 171 86.0
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 2.0e-81 305.8 171 86.0
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 6.6e-80 300.8 171 86.0
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 2.3e-69 265.8 169 72.8
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 3.1e-69 265.4 169 73.4
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 8.9e-69 263.8 169 72.2
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 9.8e-68 260.4 169 71.0
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 1.7e-67 259.6 169 72.8
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 3.7e-67 258.5 169 71.6
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 3.7e-67 258.5 169 70.4
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 3.7e-67 258.5 170 70.6
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 6.4e-67 257.7 169 71.0
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 1.4e-66 256.5 169 71.6
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 3.2e-66 255.4 170 69.4
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 4.1e-66 255.0 169 69.8
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 4.1e-66 255.0 169 70.4
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 1.2e-65 253.4 169 68.6
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 3.5e-65 251.9 169 69.8
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 3.5e-65 251.9 171 70.8
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 3.0e-64 248.8 169 68.6
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 6.6e-64 247.7 161 70.2
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 1.9e-63 246.1 166 69.9
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 2.5e-63 245.7 163 69.3
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 2.5e-63 245.7 169 65.7
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 3.3e-63 245.4 171 70.2
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 4.3e-63 245.0 169 66.9
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 4.3e-63 245.0 163 70.6
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 7.3e-63 244.2 163 68.7
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 9.5e-63 243.8 169 66.9
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 9.5e-63 243.8 163 68.7
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 9.5e-63 243.8 169 68.0
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 9.5e-63 243.8 169 66.9
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 1.6e-62 243.0 166 69.3
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 1.6e-62 243.0 166 69.3
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 2.1e-62 242.7 170 68.8
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 2.8e-62 242.3 169 66.3
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 3.6e-62 241.9 169 66.3
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 8.0e-62 240.7 177 65.0
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 1.1e-61 240.4 163 68.1
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 1.8e-61 239.6 161 68.3
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 1.8e-61 239.6 163 69.3
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 3.1e-61 238.8 163 68.7
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 3.1e-61 238.8 169 64.5
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 4.0e-61 238.4 169 66.3
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 8.9e-61 237.3 150 81.3
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 8.9e-61 237.3 194 59.8
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 8.9e-61 237.3 168 64.9
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 1.2e-60 236.9 178 67.4
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 1.2e-60 236.9 152 72.4
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 2.0e-60 236.1 163 67.5
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 2.6e-60 235.7 163 68.7
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 2.6e-60 235.7 163 68.7
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 2.6e-60 235.7 163 68.7
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 2.6e-60 235.7 161 65.8
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 2.6e-60 235.7 172 65.7
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 3.4e-60 235.3 169 65.1
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 3.4e-60 235.3 163 68.7
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 4.4e-60 235.0 163 68.7
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 4.4e-60 235.0 163 68.7
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 5.8e-60 234.6 169 64.5
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 5.8e-60 234.6 169 64.5
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 7.5e-60 234.2 169 62.7
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 1.3e-59 233.4 169 64.5
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 1.7e-59 233.0 169 61.5
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 1.7e-59 233.0 172 64.5
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 2.2e-59 232.6 169 64.5
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 6.4e-59 231.1 177 63.3
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 1.1e-58 230.3 163 65.0
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 1.9e-58 229.6 169 64.5
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 2.4e-58 229.2 170 64.7
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 3.2e-58 228.8 171 64.3
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 3.2e-58 228.8 159 66.7
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 4.6e-57 224.9 159 65.4
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 1.7e-56 223.0 161 64.0
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 3.0e-56 222.2 170 61.8
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 1.1e-55 220.3 151 68.9
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 1.5e-55 219.9 159 64.2
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 2.5e-55 219.2 170 61.2
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 9.5e-55 217.2 153 64.1
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 1.2e-54 216.9 169 59.2
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 3.6e-54 215.3 153 65.4
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 1.4e-53 213.4 164 62.2
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 2.0e-52 209.5 228 49.6
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 5.8e-52 208.0 169 60.4
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 3.9e-48 195.3 128 70.3
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 3.3e-47 192.2 137 67.2
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 4.3e-47 191.8 137 66.4
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 5.2e-45 184.9 161 57.1
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 6.8e-45 184.5 159 56.6
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 2.6e-44 182.6 127 65.4
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 3.4e-44 182.2 114 73.7
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 2.2e-43 179.5 156 57.7
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 4.9e-43 178.3 150 56.7
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 4.2e-42 175.3 156 53.8
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 7.1e-42 174.5 150 56.7
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 3.6e-38 162.2 151 56.3
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 1.1e-37 160.6 117 64.1
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 9.0e-37 157.5 123 61.0
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 7.8e-33 144.4 118 58.5
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 3.4e-28 129.0 177 44.1
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 4.9e-27 125.2 79 68.4
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 1.0e-24 117.5 79 70.9
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 1.2e-20 104.0 149 43.0
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 4.9e-19 98.6 108 50.0
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.7e-11 73.6 115 36.5
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 3.8e-11 72.4 60 58.3
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 6.1e-09 65.1 45 60.0
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 5.7e-07 58.5 41 58.5


User provided reference genes

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