Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 3.1e-50 201.4 99 100.0
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 2.3e-40 168.7 99 83.8
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 3.4e-36 154.8 100 76.0
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 2.7e-33 145.2 101 73.3
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 4.5e-33 144.4 100 70.0
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 8.6e-32 140.2 100 70.0
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 1.1e-31 139.8 99 68.7
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.9e-31 139.0 100 69.0
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 7.3e-31 137.1 99 67.7
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 9.5e-31 136.7 100 69.0
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 1.2e-30 136.3 103 69.9
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 2.1e-30 135.6 97 69.1
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 2.8e-30 135.2 103 66.0
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 4.7e-30 134.4 102 61.8
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 4.7e-30 134.4 100 67.0
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 6.1e-30 134.0 101 64.4
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 8.0e-30 133.7 101 64.4
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 1.8e-29 132.5 102 67.6
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 1.8e-29 132.5 99 65.7
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 2.3e-29 132.1 103 64.1
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 2.3e-29 132.1 98 61.2
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 2.3e-29 132.1 103 65.0
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 3.0e-29 131.7 105 67.6
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 5.2e-29 131.0 99 66.7
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 6.8e-29 130.6 99 64.6
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 6.8e-29 130.6 100 65.0
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 6.8e-29 130.6 103 63.1
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 8.9e-29 130.2 99 66.7
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 8.9e-29 130.2 96 66.7
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 1.5e-28 129.4 107 61.7
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 2.0e-28 129.0 103 62.1
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 2.6e-28 128.6 107 63.6
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 2.6e-28 128.6 107 63.6
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 2.6e-28 128.6 107 63.6
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 2.6e-28 128.6 103 62.1
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 2.6e-28 128.6 103 65.0
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 2.6e-28 128.6 101 63.4
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 3.4e-28 128.3 103 61.2
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 3.4e-28 128.3 103 61.2
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 3.4e-28 128.3 103 61.2
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 5.7e-28 127.5 111 59.5
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 7.5e-28 127.1 105 62.9
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 7.5e-28 127.1 105 62.9
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 7.5e-28 127.1 100 66.0
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 7.5e-28 127.1 100 66.0
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 9.8e-28 126.7 100 66.0
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 1.3e-27 126.3 99 63.6
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 1.3e-27 126.3 99 64.6
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 1.3e-27 126.3 100 63.0
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.9e-27 125.2 100 65.0
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 3.7e-27 124.8 100 68.0
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 3.7e-27 124.8 106 64.2
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 3.7e-27 124.8 100 63.0
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 3.7e-27 124.8 104 65.4
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 6.4e-27 124.0 102 63.7
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 6.4e-27 124.0 102 63.7
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 6.4e-27 124.0 102 63.7
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 6.4e-27 124.0 97 63.9
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 8.3e-27 123.6 101 68.3
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 8.3e-27 123.6 99 62.6
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 1.4e-26 122.9 99 62.6
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 1.4e-26 122.9 99 62.6
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 1.4e-26 122.9 101 59.4
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 1.8e-26 122.5 99 62.6
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 1.8e-26 122.5 99 62.6
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 1.8e-26 122.5 103 61.2
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 3.2e-26 121.7 103 59.2
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 3.2e-26 121.7 99 61.6
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 3.2e-26 121.7 103 60.2
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 3.2e-26 121.7 99 63.6
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 4.1e-26 121.3 103 59.2
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 4.1e-26 121.3 103 60.2
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 4.1e-26 121.3 105 62.9
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 5.4e-26 120.9 99 57.6
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 5.4e-26 120.9 100 62.0
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 5.4e-26 120.9 97 60.8
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 7.0e-26 120.6 103 62.1
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 7.0e-26 120.6 100 61.0
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 9.2e-26 120.2 105 60.0
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 1.2e-25 119.8 103 59.2
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 1.6e-25 119.4 99 62.6
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 1.6e-25 119.4 99 57.6
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 2.7e-25 118.6 100 64.0
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 3.5e-25 118.2 109 58.7
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 4.6e-25 117.9 101 58.4
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 4.6e-25 117.9 100 61.0
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 4.6e-25 117.9 103 59.2
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 7.8e-25 117.1 99 60.6
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 7.8e-25 117.1 99 60.6
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.0e-24 116.7 99 59.6
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 1.3e-24 116.3 103 60.2
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 1.7e-24 115.9 107 56.1
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 1.7e-24 115.9 102 60.8
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 3.0e-24 115.2 106 58.5
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 3.0e-24 115.2 99 56.6
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 6.6e-24 114.0 93 61.3
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 6.6e-24 114.0 100 58.0
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.1e-23 113.2 109 56.9
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 1.5e-23 112.8 118 50.8
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 1.9e-23 112.5 99 59.6
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 1.9e-23 112.5 99 59.6
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 2.5e-23 112.1 103 58.3
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 5.6e-23 110.9 101 60.4
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 5.6e-23 110.9 103 56.3
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 1.2e-22 109.8 92 60.9
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 6.2e-22 107.5 100 58.0
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 3.1e-21 105.1 103 57.3
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 8.9e-21 103.6 63 74.6
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 1.5e-20 102.8 73 68.5
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 1.5e-20 102.8 99 56.6
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 2.0e-20 102.4 63 76.2
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 2.6e-20 102.1 67 71.6
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 2.2e-19 99.0 106 50.0
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 2.2e-19 99.0 62 71.0
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 1.1e-18 96.7 105 52.4
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 3.2e-18 95.1 99 50.5
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 1.5e-15 86.3 99 46.5
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 1.9e-15 85.9 63 60.3
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 1.9e-15 85.9 86 53.5
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 7.3e-15 84.0 55 70.9
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.2e-14 83.2 75 54.7
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.6e-14 82.8 55 65.5
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 3.6e-14 81.6 91 51.6
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 4.4e-12 74.7 55 63.6
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 1.7e-11 72.8 111 45.0
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 2.7e-09 65.5 32 84.4
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.1e-07 60.1 71 46.5
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 3.3e-07 58.5 132 33.3
CDE05G1960 Ceratophyllum demersum HOM05D006197 ORTHO05D007718 3.6e-06 55.1 63 44.4


User provided reference genes

Program Settings