Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004684 Sechium edule HOM05D001772 ORTHO05D008903 1.8e-227 792.3 430 100.0
CsaV3_3G008150 Cucumis sativus L. HOM05D001772 ORTHO05D008903 3.8e-185 651.7 386 81.9
ClCG05G000920 Citrullus lanatus HOM05D001772 ORTHO05D008903 6.5e-185 651.0 431 78.2
MELO3C006034.2 Cucumis melo HOM05D001772 ORTHO05D008903 9.7e-165 583.9 430 69.8
Manes.05G024600 Manihot esculenta HOM05D001772 ORTHO05D008903 1.5e-152 543.5 389 68.4
Gohir.D12G114800 Gossypium hirsutum HOM05D001772 ORTHO05D008903 3.3e-152 542.3 390 68.5
Gohir.A12G111500 Gossypium hirsutum HOM05D001772 ORTHO05D008903 7.2e-152 541.2 390 68.2
Gorai.008G124300 Gossypium raimondii HOM05D001772 ORTHO05D008903 7.2e-152 541.2 390 67.9
QL04p013773 Quercus lobata HOM05D001772 ORTHO05D008903 6.8e-150 534.6 388 68.8
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 8.9e-150 534.3 387 66.7
TAR375G0197 Trochodendron aralioides HOM05D001772 ORTHO05D008903 8.9e-150 534.3 389 66.8
Atru.chr5.644 Acer truncatum HOM05D001772 ORTHO05D008903 1.2e-149 533.9 391 67.3
Thecc.01G344900 Theobroma cacao HOM05D001772 ORTHO05D008903 1.5e-149 533.5 397 67.5
Duzib138G1524 Durio zibethinus HOM05D001772 ORTHO05D008903 2.6e-149 532.7 362 71.5
TWI59G0809 Tripterygium wilfordii HOM05D001772 ORTHO05D008903 2.6e-149 532.7 391 68.8
Ciclev10020231m.g Citrus clementina HOM05D001772 ORTHO05D008903 1.3e-148 530.4 389 67.6
FvH4_7g16200 Fragaria vesca HOM05D001772 ORTHO05D008903 1.3e-148 530.4 390 67.4
RcHm_v2.0_Chr1g0359211 Rosa chinensis HOM05D001772 ORTHO05D008903 1.3e-148 530.4 389 67.9
TPR.G8988 Trifolium pratense HOM05D001772 ORTHO05D008903 1.1e-147 527.3 389 66.1
Medtr5g025480 Medicago truncatula HOM05D001772 ORTHO05D008903 1.8e-147 526.6 390 65.9
GSVIVG01027076001 Vitis vinifera HOM05D001772 ORTHO05D008903 2.4e-147 526.2 390 66.4
Lalb_Chr04g0261581 Lupinus albus HOM05D001772 ORTHO05D008903 7.0e-147 524.6 389 66.6
Eucgr.E00067 Eucalyptus grandis HOM05D001772 ORTHO05D008903 1.2e-146 523.9 394 66.8
THA.LOC104825876 Tarenaya hassleriana HOM05D001772 ORTHO05D008903 4.5e-146 521.9 389 65.8
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 5.9e-146 521.5 382 67.0
Psat2g145680 Pisum sativum HOM05D001772 ORTHO05D008903 1.0e-145 520.8 389 66.1
Prupe.2G185600 Prunus persica HOM05D001772 ORTHO05D008903 1.0e-145 520.8 387 66.1
CSS0012714 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 1.3e-145 520.4 389 66.1
VMungo0540G0918 Vigna mungo HOM05D001772 ORTHO05D008903 6.6e-145 518.1 387 66.4
Potri.014G096700 Populus trichocarpa HOM05D001772 ORTHO05D008903 1.5e-144 516.9 390 66.9
COL.COLO4_06307 Corchorus olitorius HOM05D001772 ORTHO05D008903 1.9e-144 516.5 389 66.1
MD07G1147600 Malus domestica HOM05D001772 ORTHO05D008903 1.9e-144 516.5 363 69.7
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 4.3e-144 515.4 395 63.8
arahy.Tifrunner.gnm1.ann1.NY4TXX Arachis hypogaea HOM05D001772 ORTHO05D008903 7.3e-144 514.6 365 67.7
Aqoxy7G00133 Aquilegia oxysepala HOM05D001772 ORTHO05D008903 2.1e-143 513.1 363 68.0
MD01G1078600 Malus domestica HOM05D001772 ORTHO05D008903 4.7e-143 511.9 377 65.5
arahy.Tifrunner.gnm1.ann1.HV5NER Arachis hypogaea HOM05D001772 ORTHO05D008903 6.1e-143 511.5 365 67.7
Lj1g0009750 Lotus japonicus HOM05D001772 ORTHO05D008903 6.1e-143 511.5 381 66.1
AT4G01040 Arabidopsis thaliana HOM05D001772 ORTHO05D008903 1.8e-142 510.0 389 63.2
CARHR249250 Cardamine hirsuta HOM05D001772 ORTHO05D008903 1.8e-142 510.0 392 63.3
Ca_25036_v3 Cicer arietinum L. HOM05D001772 ORTHO05D008903 2.3e-142 509.6 389 63.8
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 6.8e-142 508.1 388 66.0
EL10Ac1g00295 Beta vulgaris HOM05D001772 ORTHO05D008903 1.2e-141 507.3 389 63.2
Sp6g01100 Schrenkiella parvula HOM05D001772 ORTHO05D008903 1.2e-141 507.3 391 64.2
CAN.G239.5 Capsicum annuum HOM05D001772 ORTHO05D008903 1.7e-140 503.4 390 62.6
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.7e-140 503.4 389 65.3
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 2.9e-140 502.7 379 67.3
PGR042G2345 Punica granatum HOM05D001772 ORTHO05D008903 3.7e-140 502.3 359 67.4
Thhalv10028671m.g Eutrema salsugineum HOM05D001772 ORTHO05D008903 6.4e-140 501.5 391 63.2
Cc02_g39160 Coffea canephora HOM05D001772 ORTHO05D008903 8.3e-140 501.1 392 62.5
Sc01g0002840 Simmondsia chinensis HOM05D001772 ORTHO05D008903 1.4e-139 500.4 389 63.2
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 1.9e-139 500.0 383 63.7
Aa31LG5G920 Aethionema arabicum HOM05D001772 ORTHO05D008903 3.2e-139 499.2 389 63.2
AUR62023481 Chenopodium quinoa HOM05D001772 ORTHO05D008903 3.2e-139 499.2 391 63.2
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 3.2e-139 499.2 389 65.0
Nn3g19051 Nelumbo nucifera HOM05D001772 ORTHO05D008903 3.2e-139 499.2 380 65.0
AUR62004469 Chenopodium quinoa HOM05D001772 ORTHO05D008903 5.4e-139 498.4 391 62.7
PSO135G0498 Papaver somniferum HOM05D001772 ORTHO05D008903 5.4e-139 498.4 390 63.3
Carub.0006s3610 Capsella rubella HOM05D001772 ORTHO05D008903 1.2e-138 497.3 390 61.5
Sopen05g028720 Solanum pennellii HOM05D001772 ORTHO05D008903 2.7e-138 496.1 393 62.3
vmacro13174 Vaccinium macrocarpon HOM05D001772 ORTHO05D008903 3.5e-138 495.7 391 63.2
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 4.6e-138 495.4 384 64.8
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.5e-136 490.3 380 65.0
Lsat_1_v5_gn_3_139600 Lactuca sativa HOM05D001772 ORTHO05D008903 1.9e-136 490.0 395 61.0
PSO384G4631 Papaver somniferum HOM05D001772 ORTHO05D008903 1.9e-136 490.0 390 62.6
PGSC0003DMG402033880 Solanum tuberosum HOM05D001772 ORTHO05D008903 1.9e-136 490.0 363 65.0
Glyma.03G256800 Glycine max HOM05D001772 ORTHO05D008903 4.7e-135 485.3 381 64.3
Oeu007903.1 Olea europaea HOM05D001772 ORTHO05D008903 4.7e-135 485.3 396 59.3
Haze_15635 Corylus avellana HOM05D001772 ORTHO05D008903 2.3e-134 483.0 404 61.6
Solyc05g050320.4 Solanum lycopersicum HOM05D001772 ORTHO05D008903 2.6e-133 479.6 353 64.9
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 3.4e-133 479.2 383 61.6
MBI06_g46729_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D008903 9.8e-133 477.6 419 59.7
Peaxi162Scf00403g00519 Petunia axillaris HOM05D001772 ORTHO05D008903 1.7e-132 476.9 375 61.6
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 1.1e-131 474.2 383 61.4
BcaC01g06839 Brassica carinata HOM05D001772 ORTHO05D008903 2.4e-131 473.0 384 60.7
Ah.05g179760 Amaranthus hybridus HOM05D001772 ORTHO05D008903 3.2e-131 472.6 387 59.9
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 3.2e-131 472.6 383 61.1
HanXRQChr11g0353031 Helianthus annuus HOM05D001772 ORTHO05D008903 4.1e-131 472.2 388 60.1
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 1.6e-130 470.3 383 60.6
BcaB01g02345 Brassica carinata HOM05D001772 ORTHO05D008903 2.7e-130 469.5 380 61.8
Phvul.006G111900 Phaseolus vulgaris HOM05D001772 ORTHO05D008903 2.7e-130 469.5 322 70.5
Rhsim07G0005700 Rhododendron simsii HOM05D001772 ORTHO05D008903 6.0e-130 468.4 389 61.2
Migut.N01555 Erythranthe guttata HOM05D001772 ORTHO05D008903 3.0e-129 466.1 363 61.2
Hund27212 Selenicereus undatus HOM05D001772 ORTHO05D008903 6.6e-129 464.9 427 55.7
CSS0002891 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 2.1e-127 459.9 353 64.0
DCAR_005380 Daucus carota HOM05D001772 ORTHO05D008903 1.4e-126 457.2 481 50.1
SalBow5G1378 Salvia bowleyana HOM05D001772 ORTHO05D008903 4.0e-126 455.7 461 51.2
SGA_v2.0_scaffold11G05728 Striga asiatica HOM05D001772 ORTHO05D008903 4.0e-126 455.7 386 58.3
Lj9A595T55 Lonicera japonica HOM05D001772 ORTHO05D008903 2.0e-125 453.4 322 66.1
Zm00001eb358410 Zea mays HOM05D001772 ORTHO05D008903 4.9e-124 448.7 367 60.2
CDE10G0091 Ceratophyllum demersum HOM05D001772 ORTHO05D008903 4.1e-123 445.7 390 57.7
Nitab4.5_0000258g0130 Nicotiana tabacum HOM05D001772 ORTHO05D008903 1.7e-121 440.3 369 59.1
HPP92_005515 Vanilla planifolia HOM05D001772 ORTHO05D008903 2.0e-117 426.8 352 59.4
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 2.2e-116 423.3 349 59.6
Cpa.g.sc273.9 Carica papaya HOM05D001772 ORTHO05D008903 3.2e-107 392.9 303 64.4
SEGI_01392 Sequoiadendron giganteum HOM05D001772 ORTHO05D008903 1.5e-96 357.5 329 53.5
Pp3c22_2040 Physcomitrium patens HOM05D001772 ORTHO05D008903 3.7e-95 352.8 362 48.1
AL6G52340 Arabidopsis lyrata HOM05D001772 ORTHO05D008903 3.5e-90 336.3 254 63.8
SMO347G0199 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 1.4e-86 324.3 336 49.4
SMO167G0031 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 4.0e-86 322.8 333 49.2
Mapoly0102s0038 Marchantia polymorpha HOM05D001772 ORTHO05D008903 1.2e-85 321.2 338 49.7
AagrBONN_evm.TU.Sc2ySwM_344.1652 Anthoceros agrestis HOM05D001772 ORTHO05D008903 1.3e-84 317.8 411 43.6
Actinidia10113 Actinidia chinensis HOM05D001772 ORTHO05D008903 2.4e-78 297.0 232 64.7
CBR_g3968 Chara braunii HOM05D001772 ORTHO05D008903 4.3e-72 276.2 408 38.0
Nitab4.5_0004506g0060 Nicotiana tabacum HOM05D001772 ORTHO05D008903 6.3e-71 272.3 383 41.5
CiPaw.01G074400 Carya illinoinensis HOM05D001772 ORTHO05D008903 5.5e-67 259.2 185 68.1
Cre03.g200650 Chlamydomonas reinhardtii HOM05D001772 ORTHO05D008903 4.4e-56 223.0 346 34.1
ATR0589G019 Amborella trichopoda HOM05D001772 ORTHO05D008903 8.8e-49 198.7 183 55.7
Os01g0619800 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D008903 2.8e-39 167.2 129 63.6
Nitab4.5_0015177g0010 Nicotiana tabacum HOM05D001772 ORTHO05D000634 9.8e-32 142.1 120 59.2
Zm00001eb297790 Zea mays HOM05D001772 ORTHO05D023027 1.9e-27 127.9 119 52.9
Glyma.19G255000 Glycine max HOM05D001772 ORTHO05D008903 4.1e-14 83.6 76 55.3
Nitab4.5_0015177g0020 Nicotiana tabacum HOM05D001772 ORTHO05D008903 4.6e-13 80.1 50 66.0
Pp3s155_60 Physcomitrium patens HOM05D035085 ORTHO05D312423 2.8e-10 70.9 245 21.2
Zm00001eb098470 Zea mays HOM05D001772 ORTHO05D008903 1.2e-08 65.5 52 57.7


User provided reference genes

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