Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 1.5e-121 439.5 220 100.0
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 1.2e-89 333.6 225 76.9
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 1.5e-84 316.6 222 75.7
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 4.9e-80 301.6 201 77.6
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 2.7e-78 295.8 178 80.9
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 6.7e-77 291.2 230 67.0
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 6.7e-77 291.2 225 67.1
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 4.3e-76 288.5 186 75.8
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 7.4e-76 287.7 193 72.5
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 2.1e-75 286.2 224 66.1
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 1.1e-74 283.9 196 71.9
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 1.1e-74 283.9 187 73.8
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 1.4e-74 283.5 166 82.5
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 3.1e-74 282.3 165 81.2
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 9.0e-74 280.8 190 75.3
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 9.0e-74 280.8 171 78.9
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 4.5e-73 278.5 206 67.5
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 4.5e-73 278.5 207 69.1
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 4.5e-73 278.5 188 74.5
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 4.5e-73 278.5 187 72.2
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 5.9e-73 278.1 167 79.6
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 5.9e-73 278.1 174 78.7
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 5.9e-73 278.1 193 72.5
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 5.9e-73 278.1 172 76.7
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 7.6e-73 277.7 192 75.5
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 1.7e-72 276.6 229 64.6
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 3.8e-72 275.4 190 73.7
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 5.0e-72 275.0 195 72.3
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 2.5e-71 272.7 225 64.0
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 2.5e-71 272.7 234 62.8
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 3.2e-71 272.3 196 71.4
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 4.2e-71 271.9 172 76.7
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 4.2e-71 271.9 165 78.2
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 5.5e-71 271.6 195 70.8
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 5.5e-71 271.6 186 72.0
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 7.2e-71 271.2 194 71.1
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 1.2e-70 270.4 175 75.4
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 1.2e-70 270.4 175 75.4
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 1.2e-70 270.4 176 72.2
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 1.2e-70 270.4 172 77.9
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 1.6e-70 270.0 209 65.6
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 1.6e-70 270.0 173 75.1
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 3.6e-70 268.9 172 74.4
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 4.6e-70 268.5 165 75.8
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 4.6e-70 268.5 218 65.1
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 7.9e-70 267.7 220 64.1
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 1.8e-69 266.5 194 67.0
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 3.0e-69 265.8 190 68.4
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 3.9e-69 265.4 172 76.7
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 5.1e-69 265.0 206 63.1
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 1.5e-68 263.5 211 65.9
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 2.5e-68 262.7 172 76.2
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 2.5e-68 262.7 201 65.2
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 3.3e-68 262.3 180 73.9
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 7.4e-68 261.2 163 75.5
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 9.7e-68 260.8 183 71.6
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 1.6e-67 260.0 220 62.3
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.8e-67 259.2 209 65.1
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 1.8e-66 256.5 192 66.7
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 2.4e-66 256.1 175 70.3
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 3.1e-66 255.8 163 74.8
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 4.1e-66 255.4 175 70.9
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 5.3e-66 255.0 208 61.1
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 6.9e-66 254.6 205 64.4
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 6.9e-66 254.6 229 60.3
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 1.5e-65 253.4 186 67.2
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 3.4e-65 252.3 205 63.9
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 5.9e-65 251.5 186 66.1
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 1.0e-64 250.8 164 69.5
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 1.3e-64 250.4 190 66.3
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 5.0e-64 248.4 208 62.0
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 1.9e-63 246.5 185 67.6
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.9e-63 246.5 205 63.9
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 4.2e-63 245.4 242 55.8
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 4.2e-63 245.4 202 65.3
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 7.2e-63 244.6 184 64.7
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 1.6e-62 243.4 187 64.7
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 3.9e-61 238.8 174 70.7
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 3.9e-61 238.8 163 68.7
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 4.4e-60 235.3 147 76.2
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 1.8e-58 229.9 144 77.1
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 7.7e-57 224.6 221 55.2
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 1.3e-56 223.8 142 74.6
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 3.8e-56 222.2 201 63.2
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 4.2e-55 218.8 139 72.7
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 4.7e-54 215.3 248 49.2
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 3.3e-52 209.1 148 67.6
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 2.2e-51 206.5 190 58.4
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 3.1e-50 202.6 190 56.8
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 1.1e-47 194.1 122 74.6
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.5e-44 183.7 122 71.3
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 3.3e-44 182.6 123 71.5
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 5.7e-44 181.8 123 70.7
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 9.4e-39 164.5 214 44.9
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 5.2e-37 158.7 175 44.6
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 1.7e-35 153.7 206 42.2
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 3.4e-28 129.4 95 69.5
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 1.8e-26 123.6 86 69.8
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 6.4e-19 98.6 243 27.2
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 3.7e-11 72.8 119 47.1
CSS0032451 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 2.8e-06 56.6 89 42.7
THA.LOC104826924 Tarenaya hassleriana HOM05D002804 ORTHO05D003755 2.8e-06 56.6 71 50.7


User provided reference genes

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