Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004416 Sechium edule HOM05D003913 ORTHO05D004803 2.5e-122 443.0 395 100.0
ClCG08G002560 Citrullus lanatus HOM05D003913 ORTHO05D004803 1.6e-105 387.1 393 92.6
MELO3C024997.2 Cucumis melo HOM05D003913 ORTHO05D004803 4.0e-104 382.5 393 92.4
CsaV3_6G002750 Cucumis sativus L. HOM05D003913 ORTHO05D004803 7.5e-103 378.3 393 91.3
Sed0012824 Sechium edule HOM05D003913 ORTHO05D004803 1.4e-101 374.0 393 83.0
Dinv13071 Davidia involucrata HOM05D003913 ORTHO05D004803 5.4e-85 318.9 393 61.8
PGR031G2719 Punica granatum HOM05D003913 ORTHO05D004803 9.2e-85 318.2 393 84.0
Dinv44716 Davidia involucrata HOM05D003913 ORTHO05D004803 1.1e-82 311.2 393 63.4
Manes.02G188000 Manihot esculenta HOM05D003913 ORTHO05D004803 6.1e-81 305.4 395 80.3
Potri.019G087200 Populus trichocarpa HOM05D003913 ORTHO05D004803 4.9e-78 295.8 392 79.1
MD02G1272000 Malus domestica HOM05D003913 ORTHO05D004803 4.1e-77 292.7 395 81.0
MD07G1041000 Malus domestica HOM05D003913 ORTHO05D004803 2.7e-76 290.0 395 79.5
Ciclev10008663m.g Citrus clementina HOM05D003913 ORTHO05D004803 4.3e-74 282.7 393 78.4
Prupe.8G049100 Prunus persica HOM05D003913 ORTHO05D004803 4.3e-74 282.7 386 81.1
Lalb_Chr20g0121511 Lupinus albus HOM05D003913 ORTHO05D004803 2.8e-73 280.0 383 54.3
Lj5g0008809 Lotus japonicus HOM05D003913 ORTHO05D004803 2.3e-72 276.9 389 49.4
FvH4_5g22350 Fragaria vesca HOM05D003913 ORTHO05D004803 4.0e-72 276.2 394 79.2
FAN18G2025 Fragaria x ananassa HOM05D003913 ORTHO05D004803 4.0e-72 276.2 394 79.2
FAN18G2798 Fragaria x ananassa HOM05D003913 ORTHO05D004803 4.0e-72 276.2 394 79.2
RcHm_v2.0_Chr7g0210071 Rosa chinensis HOM05D003913 ORTHO05D004803 2.0e-71 273.9 394 78.9
FAN08G0696 Fragaria x ananassa HOM05D003913 ORTHO05D004803 5.8e-71 272.3 395 78.7
PSO541G3150 Papaver somniferum HOM05D003913 ORTHO05D004803 8.3e-70 268.5 361 83.4
CARHR290910 Cardamine hirsuta HOM05D003913 ORTHO05D004803 5.4e-69 265.8 396 66.9
Actinidia29569 Actinidia chinensis HOM05D003913 ORTHO05D004803 7.0e-69 265.4 393 76.8
Nitab4.5_0000366g0190 Nicotiana tabacum HOM05D003913 ORTHO05D004803 6.0e-68 262.3 396 74.7
Nitab4.5_0002890g0020 Nicotiana tabacum HOM05D003913 ORTHO05D004803 1.7e-67 260.8 347 56.5
BolC6t38638H Brassica oleracea HOM05D003913 ORTHO05D004803 2.3e-67 260.4 411 54.7
TWI12G0147 Tripterygium wilfordii HOM05D003913 ORTHO05D004803 2.3e-67 260.4 394 77.2
BraA07t30691Z Brassica rapa HOM05D003913 ORTHO05D004803 5.1e-67 259.2 408 61.8
Phvul.011G104600 Phaseolus vulgaris HOM05D003913 ORTHO05D004803 6.6e-67 258.8 395 62.8
Aqoxy1G00206 Aquilegia oxysepala HOM05D003913 ORTHO05D004803 4.3e-66 256.1 385 72.7
arahy.Tifrunner.gnm1.ann1.0Z7T57 Arachis hypogaea HOM05D003913 ORTHO05D004803 4.3e-66 256.1 386 46.9
Glyma.20G173100 Glycine max HOM05D003913 ORTHO05D004803 7.3e-66 255.4 395 56.2
A07p30560 Brassica napus HOM05D003913 ORTHO05D004803 9.5e-66 255.0 422 48.8
C06p35320 Brassica napus HOM05D003913 ORTHO05D004803 9.5e-66 255.0 425 56.7
Atru.chr13.1880 Acer truncatum HOM05D003913 ORTHO05D004803 1.6e-65 254.2 396 76.0
CANSAT25G1043 Cannabis sativa HOM05D003913 ORTHO05D004803 2.1e-65 253.8 393 75.3
Gorai.006G187200 Gossypium raimondii HOM05D003913 ORTHO05D004803 2.1e-65 253.8 392 48.5
FAN04G3257 Fragaria x ananassa HOM05D003913 ORTHO05D004803 2.8e-65 253.4 429 65.5
VMungo1080G1176 Vigna mungo HOM05D003913 ORTHO05D004803 3.6e-65 253.1 395 58.5
arahy.Tifrunner.gnm1.ann1.F1WV5B Arachis hypogaea HOM05D003913 ORTHO05D004803 1.4e-64 251.1 386 46.1
Gohir.D09G165400 Gossypium hirsutum HOM05D003913 ORTHO05D004803 2.3e-64 250.4 392 48.0
PGSC0003DMG400028735 Solanum tuberosum HOM05D003913 ORTHO05D004803 8.9e-64 248.4 396 73.0
Lj2C196T3 Lonicera japonica HOM05D003913 ORTHO05D004803 1.2e-63 248.1 396 52.0
Oeu053831.1 Olea europaea HOM05D003913 ORTHO05D004803 1.2e-63 248.1 395 67.8
Potri.013G116900 Populus trichocarpa HOM05D003913 ORTHO05D004803 7.5e-63 245.4 395 66.6
BcaB03g15621 Brassica carinata HOM05D003913 ORTHO05D004803 9.9e-63 245.0 393 64.1
CSS0047372 Camellia sinensis var. sinensis HOM05D003913 ORTHO05D004803 2.2e-62 243.8 393 74.0
RcHm_v2.0_Chr6g0272901 Rosa chinensis HOM05D003913 ORTHO05D004803 2.2e-62 243.8 386 76.7
Solyc07g008860.3 Solanum lycopersicum HOM05D003913 ORTHO05D004803 3.7e-62 243.0 396 72.7
Lsat_1_v5_gn_9_43060 Lactuca sativa HOM05D003913 ORTHO05D004803 8.3e-62 241.9 393 73.5
A07p37990 Brassica napus HOM05D003913 ORTHO05D004803 1.1e-61 241.5 396 61.9
Sabra13G0099000 Salix brachista HOM05D003913 ORTHO05D004803 1.1e-61 241.5 396 73.7
Sopen07g004790 Solanum pennellii HOM05D003913 ORTHO05D004803 1.4e-61 241.1 396 72.5
BolC6t39643H Brassica oleracea HOM05D003913 ORTHO05D004803 3.2e-61 240.0 396 64.9
FvH4_2g12470 Fragaria vesca HOM05D003913 ORTHO05D004803 3.2e-61 240.0 396 75.0
CiPaw.15G007000 Carya illinoinensis HOM05D003913 ORTHO05D004803 4.1e-61 239.6 386 67.6
ECA236G4407 Erigeron canadensis HOM05D003913 ORTHO05D004803 3.5e-60 236.5 377 47.7
BcaC08g46615 Brassica carinata HOM05D003913 ORTHO05D004803 6.0e-60 235.7 396 63.6
FAN24G0738 Fragaria x ananassa HOM05D003913 ORTHO05D004803 7.8e-60 235.3 396 74.5
GSVIVG01015205001 Vitis vinifera HOM05D003913 ORTHO05D004803 1.0e-59 235.0 395 55.9
TWI75G1061 Tripterygium wilfordii HOM05D003913 ORTHO05D004803 1.7e-59 234.2 393 72.8
TAR625G1217 Trochodendron aralioides HOM05D003913 ORTHO05D004803 3.0e-59 233.4 391 72.1
AL2G31420 Arabidopsis lyrata HOM05D003913 ORTHO05D004803 5.1e-59 232.6 390 63.6
Nn3g16733 Nelumbo nucifera HOM05D003913 ORTHO05D004803 6.6e-59 232.3 386 71.8
PSO675G8150 Papaver somniferum HOM05D003913 ORTHO05D004803 8.6e-59 231.9 400 73.5
Lj4A109T49 Lonicera japonica HOM05D003913 ORTHO05D004803 1.5e-58 231.1 393 72.3
C06p45910 Brassica napus HOM05D003913 ORTHO05D004803 1.9e-58 230.7 383 64.8
BraA07t31364Z Brassica rapa HOM05D003913 ORTHO05D004803 1.2e-57 228.0 386 64.0
Thhalv10018505m.g Eutrema salsugineum HOM05D003913 ORTHO05D004803 1.6e-57 227.6 385 63.1
Sp5g26870 Schrenkiella parvula HOM05D003913 ORTHO05D004803 1.6e-57 227.6 396 61.6
SpUn0020_0100 Schrenkiella parvula HOM05D003913 ORTHO05D004803 1.6e-57 227.6 396 61.6
Aa31LG4G8790 Aethionema arabicum HOM05D003913 ORTHO05D004803 6.2e-57 225.7 409 61.4
LjContig00222g0022410 Lotus japonicus HOM05D003913 ORTHO05D004803 8.1e-57 225.3 383 44.4
Rhsim04G0038100 Rhododendron simsii HOM05D003913 ORTHO05D004803 8.1e-57 225.3 414 68.1
Gorai.010G129100 Gossypium raimondii HOM05D003913 ORTHO05D004803 2.4e-56 223.8 395 45.3
BcaC08g45753 Brassica carinata HOM05D003913 ORTHO05D004803 6.8e-56 222.2 401 61.1
Gohir.D06G113300 Gossypium hirsutum HOM05D003913 ORTHO05D004803 8.9e-56 221.9 395 45.1
Medtr1g097140 Medicago truncatula HOM05D003913 ORTHO05D004803 8.9e-56 221.9 411 37.5
Thecc.08G198300 Theobroma cacao HOM05D003913 ORTHO05D004803 1.2e-55 221.5 392 46.4
SalBow7G2889 Salvia bowleyana HOM05D003913 ORTHO05D004803 2.0e-55 220.7 400 59.8
MSTRG.9615 Avicennia marina HOM05D003913 ORTHO05D004803 4.4e-55 219.5 397 66.2
Gohir.A06G109200 Gossypium hirsutum HOM05D003913 ORTHO05D004803 1.7e-54 217.6 364 47.5
MBI10_g42737_MAGBIO Magnolia biondii HOM05D003913 ORTHO05D004803 3.8e-54 216.5 349 79.1
ECA232G2276 Erigeron canadensis HOM05D003913 ORTHO05D004803 2.4e-53 213.8 385 70.1
Psat6g188560 Pisum sativum HOM05D000168 ORTHO05D004803 4.2e-53 213.0 374 37.2
Aa31LG7G6630 Aethionema arabicum HOM05D003913 ORTHO05D004803 9.2e-53 211.8 388 35.8
Cc11_g02860 Coffea canephora HOM05D003913 ORTHO05D004803 1.6e-52 211.1 393 64.1
Gohir.A09G169700 Gossypium hirsutum HOM05D003913 ORTHO05D004803 2.1e-52 210.7 392 43.9
Ah.03g146560 Amaranthus hybridus HOM05D003913 ORTHO05D004803 2.7e-52 210.3 394 71.3
Ca_30575_v3 Cicer arietinum L. HOM05D003913 ORTHO05D004803 4.6e-52 209.5 400 36.2
Hund19608 Selenicereus undatus HOM05D003913 ORTHO05D004803 4.6e-52 209.5 429 59.9
THA.LOC104826775 Tarenaya hassleriana HOM05D003913 ORTHO05D004803 4.6e-52 209.5 388 61.6
GSVIVG01001592001 Vitis vinifera HOM05D003913 ORTHO05D004803 1.7e-51 207.6 393 67.7
HanXRQChr11g0320411 Helianthus annuus HOM05D003913 ORTHO05D004803 8.7e-51 205.3 393 68.4
AT1G71840 Arabidopsis thaliana HOM05D003913 ORTHO05D004803 2.5e-50 203.8 388 60.1
SGA_v2.0_scaffold114G31919 Striga asiatica HOM05D003913 ORTHO05D004803 3.3e-50 203.4 341 71.0
EL10Ac6g15251 Beta vulgaris HOM05D003913 ORTHO05D004803 3.6e-49 199.9 394 68.5
AUR62017935 Chenopodium quinoa HOM05D003913 ORTHO05D004803 8.1e-49 198.7 404 61.1
arahy.Tifrunner.gnm1.ann1.A7TGXU Arachis hypogaea HOM05D003913 ORTHO05D004803 1.1e-48 198.4 410 39.0
DCAR_000644 Daucus carota HOM05D003913 ORTHO05D004803 5.3e-48 196.1 389 44.2
CDE08G0059 Ceratophyllum demersum HOM05D003913 ORTHO05D004803 1.7e-46 191.0 389 59.6
Nitab4.5_0002890g0010 Nicotiana tabacum HOM05D003913 ORTHO05D004803 1.7e-46 191.0 328 45.1
COL.COLO4_13734 Corchorus olitorius HOM05D003913 ORTHO05D004803 6.4e-46 189.1 335 49.3
VMungo0720G0336 Vigna mungo HOM05D003913 ORTHO05D004803 6.4e-46 189.1 404 54.0
Oeu053830.1 Olea europaea HOM05D003913 ORTHO05D004803 1.4e-45 188.0 395 61.0
Duzib211G0424 Durio zibethinus HOM05D003913 ORTHO05D004803 1.9e-45 187.6 400 44.2
Sabra19G0097800 Salix brachista HOM05D003913 ORTHO05D004803 1.9e-45 187.6 402 67.7
ATR0001G003 Amborella trichopoda HOM05D003913 ORTHO05D004803 2.4e-45 187.2 342 44.7
Sc16g0003970 Simmondsia chinensis HOM05D003913 ORTHO05D004803 7.1e-45 185.7 338 71.6
EL10Ac5g10958 Beta vulgaris HOM05D003913 ORTHO05D004803 9.3e-45 185.3 397 32.2
Rhsim06G0087400 Rhododendron simsii HOM05D003913 ORTHO05D004803 9.3e-45 185.3 487 57.5
Cfa018220 Carpinus fangiana HOM05D003913 ORTHO05D004803 1.2e-44 184.9 341 72.4
Sabra19G0101300 Salix brachista HOM05D003913 ORTHO05D004803 4.6e-44 183.0 402 65.7
Hma1.2p1_0276F.1_g111300 Hydrangea macrophylla HOM05D003913 ORTHO05D004803 3.0e-43 180.3 309 73.1
Actinidia33168 Actinidia chinensis HOM05D003898 ORTHO05D004642 8.7e-43 178.7 278 48.6
Pp3c14_20020 Physcomitrium patens HOM05D003913 ORTHO05D004803 2.5e-42 177.2 412 63.6
HPP92_008098 Vanilla planifolia HOM05D003913 ORTHO05D004803 5.6e-42 176.0 383 61.6
Os03g0685600 Oryza sativa ssp. japonica HOM05D003913 ORTHO05D004803 3.6e-41 173.3 385 56.1
Peaxi162Scf01838g00003 Petunia axillaris HOM05D000173 ORTHO05D000316 3.6e-41 173.3 289 40.1
Migut.I00088 Erythranthe guttata HOM05D003913 ORTHO05D004803 1.8e-40 171.0 399 45.6
FAN20G2057 Fragaria x ananassa HOM05D003913 ORTHO05D004803 4.0e-40 169.9 320 53.1
Zm00001eb362180 Zea mays HOM05D003913 ORTHO05D004803 5.3e-40 169.5 389 49.1
Carub.0002s1860 Capsella rubella HOM05D003913 ORTHO05D004803 2.6e-39 167.2 397 56.7
CARHR124080 Cardamine hirsuta HOM05D003913 ORTHO05D004803 7.6e-39 165.6 379 33.2
MBI10_g41322_MAGBIO Magnolia biondii HOM05D003913 ORTHO05D004803 3.8e-38 163.3 113 71.7
Zm00001eb139680 Zea mays HOM05D003913 ORTHO05D004803 8.4e-38 162.2 387 57.9
Migut.J01123 Erythranthe guttata HOM05D003913 ORTHO05D004803 1.1e-37 161.8 401 33.9
DCAR_004603 Daucus carota HOM05D000366 ORTHO05D000437 1.2e-36 158.3 110 70.9
AUR62003626 Chenopodium quinoa HOM05D003913 ORTHO05D004803 2.1e-36 157.5 121 66.9
vmacro21210 Vaccinium macrocarpon HOM05D003913 ORTHO05D004803 6.0e-36 156.0 414 55.6
Cpa.g.sc2399.1 Carica papaya HOM05D003913 ORTHO05D004803 2.3e-35 154.1 288 75.0
TPR.G30584 Trifolium pratense HOM05D003913 ORTHO05D004803 3.9e-35 153.3 397 30.7
Eucgr.E02330 Eucalyptus grandis HOM05D003913 ORTHO05D004803 8.7e-35 152.1 290 69.7
SEGI_39165 Sequoiadendron giganteum HOM05D003913 ORTHO05D004803 8.7e-35 152.1 387 56.1
Glyma.09G057500 Glycine max HOM05D003913 ORTHO05D004803 1.1e-34 151.8 157 51.0
Psat6g019720 Pisum sativum HOM05D003913 ORTHO05D004803 1.9e-34 151.0 270 36.3
Mapoly0155s0005 Marchantia polymorpha HOM05D003913 ORTHO05D004803 5.6e-34 149.4 397 36.3
unitig_747.g21315 Utricularia gibba HOM05D003913 ORTHO05D004803 8.1e-33 145.6 397 30.0
CANSAT11G1897 Cannabis sativa HOM05D003913 ORTHO05D004803 5.3e-32 142.9 101 71.3
TAR381G0993 Trochodendron aralioides HOM05D003913 ORTHO05D004803 9.0e-32 142.1 280 71.8
AagrBONN_evm.TU.Sc2ySwM_368.376 Anthoceros agrestis HOM05D003913 ORTHO05D004803 1.2e-31 141.7 404 55.9
Glyma.10G218600 Glycine max HOM05D003913 ORTHO05D004803 3.4e-31 140.2 120 59.2
QL02p034830 Quercus lobata HOM05D003913 ORTHO05D004803 4.5e-31 139.8 101 72.3
COL.COLO4_03395 Corchorus olitorius HOM05D003913 ORTHO05D004803 5.8e-31 139.4 116 63.8
Haze_17883 Corylus avellana HOM05D003913 ORTHO05D004803 5.8e-31 139.4 490 53.7
AUR62024845 Chenopodium quinoa HOM05D003913 ORTHO05D004803 1.3e-30 138.3 383 29.0
EL10Ac9g21859 Beta vulgaris HOM05D003913 ORTHO05D004803 3.2e-29 133.7 328 29.0
Migut.D01748 Erythranthe guttata HOM05D003913 ORTHO05D004803 3.5e-28 130.2 397 56.4
AUR62001664 Chenopodium quinoa HOM05D003913 ORTHO05D004803 3.7e-25 120.2 342 27.2
Glyma.10G218500 Glycine max HOM05D003913 ORTHO05D004803 1.4e-24 118.2 122 50.0
Thecc.09G236800 Theobroma cacao HOM05D003913 ORTHO05D004803 5.3e-24 116.3 377 28.4
Hma1.2p1_0276F.1_g111310 Hydrangea macrophylla HOM05D003913 ORTHO05D004803 2.2e-22 110.9 119 50.4
SMO347G0114 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 2.5e-21 107.5 397 33.8
Psat6g021120 Pisum sativum HOM05D003913 ORTHO05D004803 1.6e-20 104.8 127 47.2
SMO367G0065 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 1.6e-20 104.8 347 26.5
Cre12.g487200 Chlamydomonas reinhardtii HOM05D003913 ORTHO05D004803 3.5e-20 103.6 412 28.2
Lj4C56G20 Lonicera japonica HOM05D003913 ORTHO05D004803 2.3e-19 100.9 213 34.3
PSO455G0073 Papaver somniferum HOM05D003913 ORTHO05D004803 6.7e-19 99.4 64 71.9
SMO343G0013 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 5.7e-18 96.3 380 24.5
BolC6t38649H Brassica oleracea HOM05D003913 ORTHO05D004803 2.2e-17 94.4 147 38.1
SHI13909 Sapria himalayana HOM05D003913 ORTHO05D004803 6.3e-17 92.8 384 25.0
Medtr7g079470 Medicago truncatula HOM05D003913 ORTHO05D004803 1.2e-15 88.6 71 60.6
Medtr7g111550 Medicago truncatula HOM05D003913 ORTHO05D004803 5.5e-13 79.7 107 41.1
CBR_g49506 Chara braunii HOM05D003913 ORTHO05D004803 6.1e-12 76.3 397 53.9
MCO10G384 Micromonas commoda HOM05D003913 ORTHO05D004803 6.1e-12 76.3 369 39.8
A02p17440 Brassica napus HOM05D003913 ORTHO05D004803 2.3e-11 74.3 50 66.0
BraA02t06789Z Brassica rapa HOM05D003913 ORTHO05D004803 1.1e-10 72.0 50 64.0
Glyma.17G173200 Glycine max HOM05D003913 ORTHO05D004803 6.3e-09 66.2 42 66.7
BolC6t38648H Brassica oleracea HOM05D003420 ORTHO05D003970 2.4e-08 64.3 57 52.6
BolC6t38646H Brassica oleracea HOM05D003913 ORTHO05D004803 4.5e-07 60.1 150 29.3
CSS0010217 Camellia sinensis var. sinensis HOM05D003913 ORTHO05D004803 6.5e-06 56.2 36 75.0


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