Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004387 Sechium edule HOM05D008150 ORTHO05D010312 6.3e-249 863.6 422 100.0
ClCG01G022200 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.8e-30 137.9 434 30.9
MELO3C007368.2 Cucumis melo HOM05D008150 ORTHO05D010312 2.6e-29 134.0 438 31.1
ClCG06G016080 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.3e-28 131.7 442 27.6
ClCG11G005140 Citrullus lanatus HOM05D008150 ORTHO05D010312 6.4e-28 129.4 413 27.6
ClCG03G016610 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.1e-27 128.6 427 30.0
ClCG11G004750 Citrullus lanatus HOM05D008150 ORTHO05D010312 2.5e-27 127.5 421 29.7
MELO3C033559.2 Cucumis melo HOM05D008150 ORTHO05D010312 7.1e-27 125.9 403 28.0
CsaV3_6G049300 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.7e-26 124.0 438 29.7
CsaV3_1G039380 Cucumis sativus L. HOM05D008150 ORTHO05D010312 3.5e-26 123.6 430 29.3
Sed0002875 Sechium edule HOM05D008150 ORTHO05D010312 3.3e-24 117.1 402 27.4
MELO3C015364.2 Cucumis melo HOM05D008150 ORTHO05D010312 2.1e-23 114.4 431 26.9
Sed0016315 Sechium edule HOM05D008150 ORTHO05D010312 6.9e-22 109.4 311 30.2
Sed0015862 Sechium edule HOM05D008150 ORTHO05D010312 4.9e-20 103.2 420 26.2
MELO3C035228.2 Cucumis melo HOM05D008150 ORTHO05D010312 5.5e-19 99.8 362 28.5
CsaV3_6G007970 Cucumis sativus L. HOM05D008150 ORTHO05D010312 1.6e-18 98.2 390 26.7
Sed0015534 Sechium edule HOM05D008150 ORTHO05D010312 1.6e-18 98.2 424 26.2
ClCG10G014280 Citrullus lanatus HOM05D008150 ORTHO05D010312 2.1e-18 97.8 400 27.0
Sed0020143 Sechium edule HOM05D008150 ORTHO05D010312 4.6e-18 96.7 405 26.2
ClCG11G005160 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.3e-17 95.1 356 28.7
CsaV3_1G002720 Cucumis sativus L. HOM05D008150 ORTHO05D010312 3.9e-17 93.6 339 26.3
Sed0011109 Sechium edule HOM05D008150 ORTHO05D010312 6.7e-17 92.8 410 25.4
Sed0017849 Sechium edule HOM05D008150 ORTHO05D010312 4.3e-16 90.1 404 25.0
Sed0020127 Sechium edule HOM05D008150 ORTHO05D010312 9.7e-16 89.0 426 26.1
MELO3C002009.2 Cucumis melo HOM05D008150 ORTHO05D010312 1.1e-14 85.5 419 26.0
Sed0023044 Sechium edule HOM05D008150 ORTHO05D010312 1.4e-14 85.1 406 26.4
Sed0019399 Sechium edule HOM05D008150 ORTHO05D010312 6.9e-14 82.8 414 25.1
CsaV3_6G008010 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.0e-13 81.3 374 26.2
CsaV3_5G039080 Cucumis sativus L. HOM05D008150 ORTHO05D010312 3.4e-13 80.5 157 34.4
Sed0027992 Sechium edule HOM05D008150 ORTHO05D010312 4.5e-13 80.1 408 24.3
CsaV3_5G038910 Cucumis sativus L. HOM05D008150 ORTHO05D010312 7.7e-13 79.3 329 23.4
Sed0025201 Sechium edule HOM05D008150 ORTHO05D010312 7.7e-13 79.3 382 26.4
Sed0000604 Sechium edule HOM05D008150 ORTHO05D010312 1.0e-12 79.0 373 24.7
CsaV3_1G029060 Cucumis sativus L. HOM05D003072 ORTHO05D008464 3.8e-12 77.0 281 27.0
Sed0022366 Sechium edule HOM05D008150 ORTHO05D010312 8.5e-12 75.9 341 26.4
ClCG05G002850 Citrullus lanatus HOM05D008150 ORTHO05D010312 3.2e-11 73.9 137 32.8
CsaV3_1G005780 Cucumis sativus L. HOM05D008150 ORTHO05D010312 4.2e-11 73.6 319 25.7
CsaV3_3G042360 Cucumis sativus L. HOM05D008150 ORTHO05D010312 7.2e-11 72.8 429 22.6
CsaV3_1G003470 Cucumis sativus L. HOM05D008150 ORTHO05D010312 9.4e-11 72.4 327 26.3
CsaV3_5G038900 Cucumis sativus L. HOM05D008150 ORTHO05D010312 9.4e-11 72.4 343 26.2
Phvul.009G054900 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 3.0e-09 67.4 244 23.8
Potri.004G000900 Populus trichocarpa HOM05D000007 ORTHO05D000521 6.7e-09 66.2 277 21.7
Sed0014209 Sechium edule HOM05D008150 ORTHO05D010312 6.7e-09 66.2 287 23.7
Prupe.3G111700 Prunus persica HOM05D000007 ORTHO05D000521 2.0e-08 64.7 213 27.2
COL.COLO4_29208 Corchorus olitorius HOM05D000007 ORTHO05D000521 4.3e-08 63.5 274 23.0
MELO3C022333.2 Cucumis melo HOM05D002645 ORTHO05D002741 5.7e-08 63.2 327 22.9
Sed0008558 Sechium edule HOM05D008150 ORTHO05D010312 2.8e-07 60.8 228 27.2
ClCG01G016520 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.1e-06 58.9 134 35.1
PSO675G5716 Papaver somniferum HOM05D000007 ORTHO05D000676 1.1e-06 58.9 330 23.0
Migut.C01216 Erythranthe guttata HOM05D000007 ORTHO05D000521 1.8e-06 58.2 257 26.1
Haze_14521 Corylus avellana HOM05D000007 ORTHO05D000039 3.1e-06 57.4 222 26.1
ClCG06G016450 Citrullus lanatus HOM05D008150 ORTHO05D010312 4.1e-06 57.0 175 23.4
PGSC0003DMG400018496 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.9e-06 56.2 244 24.6


User provided reference genes

Program Settings