Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004364 Sechium edule HOM05D011459 ORTHO05D013640 2.2e-160 568.9 296 100.0
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 1.1e-82 310.8 360 51.9
Sed0015156 Sechium edule HOM05D011459 ORTHO05D013640 3.7e-70 269.2 346 49.1
CsaV3_2G007240 Cucumis sativus L. HOM05D008339 ORTHO05D007109 2.2e-51 206.8 170 62.4
MELO3C031526.2 Cucumis melo HOM05D011459 ORTHO05D013640 6.1e-49 198.7 170 60.0
Thecc.05G326500 Theobroma cacao HOM05D011459 ORTHO05D013640 3.2e-18 96.7 167 38.3
Sabra13G0004900 Salix brachista HOM05D011459 ORTHO05D013640 3.7e-14 83.2 156 37.2
MELO3C004164.2 Cucumis melo HOM05D008339 ORTHO05D009712 4.9e-14 82.8 148 39.2
COL.COLO4_05518 Corchorus olitorius HOM05D011459 ORTHO05D013640 1.8e-13 80.9 157 34.4
Thecc.05G326300 Theobroma cacao HOM05D011459 ORTHO05D013640 3.1e-13 80.1 158 33.5
Sed0011112 Sechium edule HOM05D008339 ORTHO05D009712 7.0e-13 79.0 122 37.7
MELO3C031525.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.0e-12 77.4 154 31.2
Thecc.05G326400 Theobroma cacao HOM05D011459 ORTHO05D013640 1.0e-11 75.1 127 38.6
MELO3C004156.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.3e-11 74.7 154 31.2
QL07p004956 Quercus lobata HOM05D011459 ORTHO05D013640 1.3e-11 74.7 159 32.7
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 1.3e-11 74.7 146 32.2
MELO3C004166.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.3e-11 73.9 154 31.2
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 2.3e-11 73.9 167 31.1
QL07p004996 Quercus lobata HOM05D011459 ORTHO05D013640 2.9e-11 73.6 165 32.1
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 1.5e-10 71.2 166 30.7
MELO3C004168.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.9e-10 70.9 154 30.5
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 5.6e-10 69.3 146 33.6
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 7.3e-10 68.9 166 31.9
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 1.6e-09 67.8 175 28.0
TAR362G0829 Trochodendron aralioides HOM05D011459 ORTHO05D013640 4.7e-09 66.2 129 34.9
PGR031G3424 Punica granatum HOM05D011459 ORTHO05D013640 2.3e-08 63.9 119 37.8
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 6.8e-08 62.4 171 31.6
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 4.4e-07 59.7 174 28.2
Actinidia18154 Actinidia chinensis HOM05D009438 ORTHO05D010870 5.7e-07 59.3 100 34.0
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 5.7e-07 59.3 158 25.9
Atru.chr2.222 Acer truncatum HOM05D011459 ORTHO05D013640 1.3e-06 58.2 168 29.8
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 1.3e-06 58.2 166 29.5
Prupe.6G309200 Prunus persica HOM05D008339 ORTHO05D009712 1.7e-06 57.8 173 31.2
MELO3C031306.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.2e-06 57.4 137 28.5
MELO3C031307.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.2e-06 57.4 137 29.2
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 2.2e-06 57.4 135 31.1
TWI12G1182 Tripterygium wilfordii HOM05D008339 ORTHO05D009712 2.9e-06 57.0 165 27.3
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 3.7e-06 56.6 155 31.6
Thecc.10G106100 Theobroma cacao HOM05D015467 ORTHO05D001819 3.7e-06 56.6 151 31.1
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 4.9e-06 56.2 145 30.3
Prupe.1G205300 Prunus persica HOM05D008339 ORTHO05D009712 8.3e-06 55.5 118 33.9


User provided reference genes

Program Settings