Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 1.2e-63 246.9 183 100.0
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 1.8e-51 206.5 200 83.5
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 3.1e-51 205.7 200 83.5
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 7.6e-50 201.1 196 82.1
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 4.2e-40 168.7 178 78.7
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 3.9e-38 162.2 175 78.9
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 6.6e-38 161.4 162 83.3
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 4.3e-37 158.7 181 75.7
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 7.3e-37 157.9 186 75.3
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 3.6e-36 155.6 186 74.7
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 6.9e-35 151.4 167 79.0
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 1.2e-34 150.6 162 80.2
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 2.0e-34 149.8 160 79.4
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 2.6e-34 149.4 174 74.7
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 5.8e-34 148.3 171 76.0
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 5.8e-34 148.3 178 76.4
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 5.8e-34 148.3 178 76.4
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 7.6e-34 147.9 180 74.4
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 1.3e-33 147.1 166 77.1
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 2.2e-33 146.4 163 77.3
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 4.9e-33 145.2 172 75.0
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 4.9e-33 145.2 175 73.1
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 8.4e-33 144.4 175 74.9
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 3.2e-32 142.5 165 77.6
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 4.2e-32 142.1 152 79.6
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 5.4e-32 141.7 173 74.0
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 1.2e-31 140.6 170 75.3
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 1.6e-31 140.2 184 69.0
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 2.1e-31 139.8 166 72.3
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 4.6e-31 138.7 162 76.5
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 4.6e-31 138.7 163 77.9
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 1.3e-30 137.1 170 75.3
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 1.8e-30 136.7 180 72.2
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 3.9e-30 135.6 141 82.3
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 3.9e-30 135.6 176 71.6
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 6.7e-30 134.8 174 67.8
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 8.7e-30 134.4 183 68.9
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 1.5e-29 133.7 141 81.6
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 1.5e-29 133.7 163 73.0
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 3.3e-29 132.5 183 68.9
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 3.3e-29 132.5 170 72.9
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 7.4e-29 131.3 173 69.4
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 7.4e-29 131.3 190 65.3
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 6.2e-28 128.3 193 65.8
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 5.3e-27 125.2 176 69.9
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 6.9e-27 124.8 172 69.2
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 6.9e-27 124.8 140 75.7
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 6.9e-27 124.8 172 70.3
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 6.9e-27 124.8 193 65.3
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 9.9e-26 120.9 177 67.8
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 1.7e-25 120.2 176 67.6
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 1.7e-25 120.2 166 68.1
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 3.8e-25 119.0 161 70.8
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 6.4e-25 118.2 177 67.8
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 8.4e-25 117.9 173 71.1
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 1.4e-24 117.1 172 65.1
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 2.4e-24 116.3 173 69.9
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 2.4e-24 116.3 179 65.9
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 4.2e-24 115.5 170 70.0
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 4.6e-23 112.1 156 69.2
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 6.0e-23 111.7 177 66.1
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 6.0e-23 111.7 163 70.6
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 7.9e-23 111.3 182 66.5
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 7.9e-23 111.3 122 82.8
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 7.9e-23 111.3 140 75.7
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 1.8e-22 110.2 173 67.6
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 5.1e-22 108.6 154 68.2
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 6.7e-22 108.2 131 78.6
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 6.7e-22 108.2 131 78.6
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 6.7e-22 108.2 177 65.0
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 1.1e-21 107.5 155 67.7
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 1.9e-21 106.7 166 65.7
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 5.6e-21 105.1 183 61.2
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 1.3e-20 104.0 177 62.1
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 1.6e-20 103.6 168 66.1
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 2.1e-20 103.2 183 60.7
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 2.1e-20 103.2 124 80.6
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 2.1e-20 103.2 183 59.0
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 2.8e-20 102.8 183 60.7
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 2.8e-20 102.8 183 60.7
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 3.7e-20 102.4 123 81.3
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 4.8e-20 102.1 183 60.7
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 4.8e-20 102.1 183 62.3
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 4.8e-20 102.1 163 67.5
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 1.1e-19 100.9 184 61.4
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 2.4e-19 99.8 165 66.1
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 2.4e-19 99.8 183 59.6
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 2.4e-19 99.8 164 65.2
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 6.9e-19 98.2 117 81.2
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 1.2e-18 97.4 165 66.7
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 2.6e-18 96.3 127 78.0
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 7.6e-18 94.7 183 56.3
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 7.6e-18 94.7 145 43.4
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 2.2e-17 93.2 89 77.5
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 4.9e-17 92.0 183 57.4
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 6.5e-17 91.7 172 64.5
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 2.5e-16 89.7 141 65.2
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 3.2e-16 89.4 183 57.4
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 4.2e-16 89.0 134 71.6
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 4.2e-16 89.0 166 64.5
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 5.5e-16 88.6 150 66.7
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 5.5e-16 88.6 67 67.2
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 9.3e-16 87.8 175 56.6
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 9.3e-16 87.8 67 73.1
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 7.9e-15 84.7 67 65.7
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 1.0e-14 84.3 182 58.2
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 3.7e-12 75.9 150 59.3
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 1.4e-11 73.9 111 55.9
unitig_0.g5 Utricularia gibba HOM05D000887 ORTHO05D000908 2.0e-10 70.1 121 68.6


User provided reference genes

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