Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 5.5e-131 471.1 257 100.0
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 1.6e-101 373.2 260 79.6
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 1.0e-100 370.5 259 78.0
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 1.9e-99 366.3 261 81.2
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 2.3e-97 359.4 263 78.7
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 9.2e-70 267.7 267 57.3
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 2.7e-69 266.2 267 55.8
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 4.6e-69 265.4 267 55.8
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 2.3e-68 263.1 193 67.9
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 3.0e-68 262.7 270 55.9
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 1.1e-67 260.8 265 54.3
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 1.1e-67 260.8 211 63.5
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 1.9e-67 260.0 202 64.4
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 2.5e-67 259.6 270 55.6
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 2.5e-67 259.6 214 61.7
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 5.6e-67 258.5 265 53.2
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 9.6e-67 257.7 268 54.5
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 1.6e-66 256.9 202 63.9
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 2.1e-66 256.5 266 57.5
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 3.6e-66 255.8 189 68.8
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 6.2e-66 255.0 265 57.0
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 6.2e-66 255.0 196 63.3
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 1.1e-65 254.2 267 53.6
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 1.1e-65 254.2 208 61.5
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 1.1e-65 254.2 265 59.2
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 1.8e-65 253.4 196 64.8
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 2.4e-65 253.1 254 54.3
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 2.4e-65 253.1 204 61.3
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 6.9e-65 251.5 268 59.3
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 8.9e-65 251.1 185 68.6
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.2e-64 250.8 194 66.5
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 1.2e-64 250.8 194 66.5
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 2.0e-64 250.0 234 56.0
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 2.6e-64 249.6 189 65.6
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 3.4e-64 249.2 199 62.8
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 3.4e-64 249.2 260 54.6
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 3.4e-64 249.2 260 54.6
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 4.4e-64 248.8 268 53.4
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 5.8e-64 248.4 245 55.1
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 7.6e-64 248.1 259 52.1
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 7.6e-64 248.1 191 64.4
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.7e-63 246.9 194 65.5
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 1.7e-63 246.9 189 64.6
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 6.4e-63 245.0 189 63.0
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 1.4e-62 243.8 249 53.4
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 1.4e-62 243.8 195 64.1
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 1.9e-62 243.4 194 62.4
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 2.4e-62 243.0 177 68.4
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 2.4e-62 243.0 197 62.4
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 4.2e-62 242.3 272 49.3
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 4.2e-62 242.3 196 62.2
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 7.1e-62 241.5 263 51.3
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 9.3e-62 241.1 211 57.8
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 9.3e-62 241.1 266 60.2
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 1.2e-61 240.7 245 59.2
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 1.6e-61 240.4 200 60.5
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 2.1e-61 240.0 192 63.5
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 2.7e-61 239.6 195 62.1
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 2.7e-61 239.6 278 51.4
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 6.0e-61 238.4 212 58.0
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.0e-60 237.7 261 58.2
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 1.0e-60 237.7 271 58.3
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 1.0e-60 237.7 196 63.8
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 2.3e-60 236.5 162 69.8
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 3.9e-60 235.7 263 58.6
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 5.1e-60 235.3 211 57.3
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 6.6e-60 235.0 191 60.2
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 1.1e-59 234.2 254 54.7
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 2.5e-59 233.0 206 58.3
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 3.3e-59 232.6 211 57.8
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 3.3e-59 232.6 188 61.7
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 8.1e-58 228.0 205 58.5
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 1.8e-57 226.9 263 49.0
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 2.4e-57 226.5 230 55.7
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 3.1e-57 226.1 194 59.3
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 5.3e-57 225.3 236 55.9
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 5.3e-57 225.3 204 60.3
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 6.9e-57 224.9 194 58.8
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 6.9e-57 224.9 211 55.5
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 9.0e-57 224.6 263 49.4
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 9.0e-57 224.6 192 57.3
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 1.2e-56 224.2 267 50.9
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 2.0e-56 223.4 189 59.8
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 2.6e-56 223.0 261 49.0
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 9.9e-56 221.1 189 58.2
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 1.7e-55 220.3 266 49.6
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 1.7e-55 220.3 266 49.6
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 1.7e-55 220.3 266 49.6
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 1.7e-55 220.3 194 58.8
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 2.2e-55 219.9 194 57.7
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 2.2e-55 219.9 265 49.4
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 2.9e-55 219.5 194 59.3
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 4.9e-55 218.8 194 57.7
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 4.9e-55 218.8 266 50.4
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 8.4e-55 218.0 194 57.2
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 8.4e-55 218.0 195 55.9
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 1.1e-54 217.6 194 56.7
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 1.1e-54 217.6 223 52.5
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 2.4e-54 216.5 269 47.2
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 9.3e-54 214.5 223 53.4
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 1.2e-53 214.2 192 57.3
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 1.2e-53 214.2 192 57.3
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 6.0e-53 211.8 192 58.3
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 1.3e-52 210.7 213 51.2
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 5.1e-52 208.8 147 68.0
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 1.9e-51 206.8 215 51.2
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 1.6e-50 203.8 276 50.4
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 5.8e-48 195.3 159 58.5
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 1.3e-42 177.6 171 50.9
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 1.2e-40 171.0 139 59.7
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 1.2e-40 171.0 255 42.0
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 1.7e-39 167.2 168 53.6
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 8.4e-39 164.9 194 44.8
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 1.9e-38 163.7 193 50.8
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 1.9e-38 163.7 156 51.9
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 4.2e-38 162.5 156 52.6
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 5.1e-36 155.6 189 46.6
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 1.7e-31 140.6 180 41.7
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 3.8e-31 139.4 171 45.0
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 8.5e-31 138.3 112 59.8
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 5.7e-27 125.6 154 40.9
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 9.7e-27 124.8 109 62.4


User provided reference genes

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