Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 1.7e-200 702.6 381 100.0
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 1.1e-180 636.7 372 91.9
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 6.2e-179 630.9 372 89.5
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 3.1e-170 602.1 466 72.7
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 1.4e-159 566.6 322 85.4
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 1.4e-159 566.6 311 86.5
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 2.4e-159 565.8 367 82.3
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 5.4e-159 564.7 362 81.2
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 5.4e-159 564.7 380 78.4
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 9.2e-159 563.9 314 85.0
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 2.7e-158 562.4 377 76.9
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 7.8e-158 560.8 311 85.5
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 1.0e-157 560.5 367 77.9
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 1.3e-157 560.1 307 87.6
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 1.3e-157 560.1 307 87.3
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 3.0e-157 558.9 379 77.3
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 3.0e-157 558.9 379 77.3
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 3.9e-157 558.5 311 85.9
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 6.6e-157 557.8 320 84.1
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 8.7e-157 557.4 387 79.6
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.1e-156 557.0 328 83.2
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 1.1e-156 557.0 306 85.9
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.5e-156 556.6 328 83.2
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.5e-156 555.8 328 83.2
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 2.5e-156 555.8 384 77.9
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 3.3e-156 555.4 385 80.3
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 3.3e-156 555.4 385 79.7
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 4.3e-156 555.1 360 80.6
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 7.3e-156 554.3 364 80.2
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 9.6e-156 553.9 385 77.7
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 9.6e-156 553.9 385 77.7
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 9.6e-156 553.9 306 85.6
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 1.2e-155 553.5 385 80.0
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 4.7e-155 551.6 367 78.7
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 4.7e-155 551.6 306 85.3
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 1.1e-154 550.4 353 82.2
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.4e-154 550.1 356 81.2
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 2.4e-154 549.3 362 77.3
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 2.4e-154 549.3 320 82.2
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 2.4e-154 549.3 384 79.2
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 4.0e-154 548.5 357 75.6
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 5.3e-154 548.1 366 77.6
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 5.3e-154 548.1 357 75.1
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 6.9e-154 547.7 360 79.2
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 1.2e-153 547.0 381 77.2
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 1.5e-153 546.6 326 80.7
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 2.0e-153 546.2 381 77.7
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 2.6e-153 545.8 365 77.5
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 3.4e-153 545.4 359 78.6
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 3.4e-153 545.4 317 82.3
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 7.6e-153 544.3 381 77.2
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 1.7e-152 543.1 355 74.6
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 1.7e-152 543.1 306 84.6
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 2.2e-152 542.7 364 77.2
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 2.2e-152 542.7 321 81.9
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 2.2e-152 542.7 360 78.3
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 3.8e-152 542.0 330 80.3
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 6.4e-152 541.2 315 81.6
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 6.4e-152 541.2 379 79.2
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 1.1e-151 540.4 323 80.8
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.1e-151 540.4 309 84.5
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.9e-151 539.7 388 73.5
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.4e-151 539.3 318 81.4
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 2.4e-151 539.3 366 81.7
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 4.2e-151 538.5 372 76.6
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.2e-151 538.5 318 81.4
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 4.2e-151 538.5 311 83.3
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.2e-150 537.0 366 74.3
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.6e-150 536.6 362 76.8
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 2.1e-150 536.2 307 82.4
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.1e-150 536.2 318 81.1
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 2.1e-150 536.2 310 82.9
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.7e-150 535.8 362 77.1
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 3.5e-150 535.4 370 75.7
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 4.6e-150 535.0 362 77.3
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 6.0e-150 534.6 377 74.3
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 6.0e-150 534.6 377 74.3
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.3e-149 533.5 354 74.3
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 1.7e-149 533.1 323 78.9
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 3.0e-149 532.3 307 82.4
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.0e-149 532.3 309 82.2
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 5.1e-149 531.6 310 82.3
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 5.1e-149 531.6 307 81.1
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 8.7e-149 530.8 307 81.8
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 3.3e-148 528.9 365 72.1
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 3.3e-148 528.9 383 74.2
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 5.6e-148 528.1 313 79.2
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 5.6e-148 528.1 302 83.4
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 5.6e-148 528.1 361 76.5
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 7.3e-148 527.7 299 83.9
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 7.3e-148 527.7 308 81.8
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 9.6e-148 527.3 314 80.6
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 9.6e-148 527.3 305 81.6
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 9.6e-148 527.3 313 79.9
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.3e-147 526.9 367 77.1
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 1.3e-147 526.9 312 81.7
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.6e-147 526.6 307 82.1
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 2.1e-147 526.2 311 80.7
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 2.8e-147 525.8 308 81.8
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 6.2e-147 524.6 314 80.3
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.1e-146 523.9 367 73.3
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 5.3e-146 521.5 305 83.0
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 6.9e-146 521.2 308 80.2
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 2.6e-145 519.2 297 82.5
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 4.5e-145 518.5 310 77.7
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 5.8e-145 518.1 366 71.9
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 9.9e-145 517.3 362 69.9
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 1.4e-143 513.5 319 75.2
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 2.4e-143 512.7 304 79.6
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 5.4e-143 511.5 309 77.7
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 7.1e-143 511.1 301 80.7
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 7.1e-143 511.1 380 68.2
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 9.3e-143 510.8 380 67.9
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 3.5e-142 508.8 306 79.4
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 3.5e-142 508.8 379 67.8
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 3.5e-142 508.8 286 82.5
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 4.6e-142 508.4 378 66.7
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 1.3e-141 506.9 387 66.7
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 1.6e-139 500.0 300 80.0
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 1.4e-138 496.9 303 78.5
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 1.8e-138 496.5 359 71.6
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 6.9e-138 494.6 304 77.6
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 1.2e-134 483.8 309 76.4
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.3e-133 480.3 268 86.6
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 1.5e-132 476.9 379 71.5
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 4.3e-132 475.3 269 81.4
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 2.1e-131 473.0 320 74.4
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 5.3e-130 468.4 376 68.1
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 3.4e-129 465.7 321 73.8
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 5.8e-129 464.9 315 73.7
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 2.5e-127 459.5 294 81.0
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 3.2e-127 459.1 283 74.9
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 7.4e-124 448.0 301 72.8
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 9.7e-124 447.6 298 69.8
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 2.8e-123 446.0 342 66.7
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 4.8e-123 445.3 300 67.0
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 3.4e-121 439.1 315 65.1
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 6.5e-120 434.9 240 85.0
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 4.2e-119 432.2 298 66.4
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 6.1e-118 428.3 372 60.8
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 2.0e-116 423.3 298 64.1
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.8e-114 416.8 359 61.6
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 3.1e-114 416.0 326 62.9
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 2.5e-111 406.4 301 66.4
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 7.2e-111 404.8 320 60.0
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 1.4e-109 400.6 221 87.8
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 6.7e-109 398.3 368 58.2
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.7e-107 393.7 353 66.6
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 5.0e-96 355.5 233 74.7
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 3.2e-95 352.8 299 57.2
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 2.7e-86 323.2 211 69.7
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 6.6e-80 302.0 257 64.6
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 4.1e-66 256.1 150 79.3
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.9e-63 247.3 316 48.7
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 3.9e-56 223.0 171 62.0
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 1.8e-53 214.2 127 77.2
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 1.3e-43 181.4 196 53.1
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 3.9e-32 143.3 98 69.4
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 2.4e-29 134.0 280 30.7
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 2.2e-27 127.5 103 63.1
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 6.0e-25 119.4 349 27.8
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 1.3e-24 118.2 65 83.1
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 1.2e-20 105.1 298 27.5
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 3.4e-20 103.6 246 33.7
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 3.2e-18 97.1 70 67.1
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 3.2e-18 97.1 70 67.1
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.7e-17 94.0 71 69.0
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 2.7e-17 94.0 70 65.7
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 6.0e-17 92.8 377 25.2
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 5.7e-15 86.3 59 69.5
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 6.2e-14 82.8 89 71.9
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 7.6e-12 75.9 35 100.0
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 1.7e-11 74.7 108 36.1
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 2.1e-09 67.8 49 65.3
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 1.0e-08 65.5 33 84.8
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 4.8e-06 56.6 38 65.8
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 4.8e-06 56.6 38 65.8
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 8.2e-06 55.8 38 63.2


User provided reference genes

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