Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004099 Sechium edule HOM05D005292 ORTHO05D006473 9.2e-234 813.1 402 100.0
ClCG01G003660 Citrullus lanatus HOM05D005292 ORTHO05D006473 2.3e-184 649.0 416 81.2
CsaV3_5G003780 Cucumis sativus L. HOM05D005292 ORTHO05D006473 2.0e-183 646.0 404 80.9
QL12p014915 Quercus lobata HOM05D005292 ORTHO05D006473 8.5e-163 577.4 355 80.6
GSVIVG01004916001 Vitis vinifera HOM05D005292 ORTHO05D006473 1.1e-162 577.0 353 81.0
CANSAT80G2034 Cannabis sativa HOM05D005292 ORTHO05D006473 2.7e-161 572.4 345 80.6
Cfa012803 Carpinus fangiana HOM05D005292 ORTHO05D006473 8.0e-161 570.9 379 75.5
Duzib084G0213 Durio zibethinus HOM05D005292 ORTHO05D006473 1.0e-160 570.5 352 79.0
Cpa.g.sc29.95 Carica papaya HOM05D005292 ORTHO05D006473 1.4e-160 570.1 392 73.7
Thecc.03G261400 Theobroma cacao HOM05D005292 ORTHO05D006473 4.0e-160 568.5 355 78.0
CiPaw.11G147800 Carya illinoinensis HOM05D005292 ORTHO05D006473 6.8e-160 567.8 352 80.1
Gohir.D12G223000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 4.4e-159 565.1 352 79.5
COL.COLO4_31983 Corchorus olitorius HOM05D005292 ORTHO05D006473 1.3e-158 563.5 393 72.0
Ca_12278_v3 Cicer arietinum L. HOM05D005292 ORTHO05D006473 4.8e-158 561.6 360 76.7
Lj4g0005126 Lotus japonicus HOM05D005292 ORTHO05D006473 2.4e-157 559.3 356 77.8
VMungo1215G1740 Vigna mungo HOM05D005292 ORTHO05D006473 2.4e-157 559.3 355 78.6
Atru.chr9.1428 Acer truncatum HOM05D005292 ORTHO05D006473 1.6e-156 556.6 346 81.2
Prupe.5G079200 Prunus persica HOM05D005292 ORTHO05D006473 5.9e-156 554.7 357 76.8
Manes.02G033900 Manihot esculenta HOM05D005292 ORTHO05D006473 7.7e-156 554.3 351 79.5
Glyma.05G052500 Glycine max HOM05D005292 ORTHO05D006473 1.0e-155 553.9 356 78.4
Phvul.003G214500 Phaseolus vulgaris HOM05D005292 ORTHO05D006473 1.0e-155 553.9 355 78.0
Gohir.D03G157800 Gossypium hirsutum HOM05D005292 ORTHO05D006473 6.5e-155 551.2 379 73.1
TWI15G0139 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 8.5e-155 550.8 352 76.7
CiPaw.12G105300 Carya illinoinensis HOM05D005292 ORTHO05D006473 1.1e-154 550.4 352 78.1
Gorai.008G239300 Gossypium raimondii HOM05D005292 ORTHO05D006473 1.5e-154 550.1 377 73.5
Gohir.A03G012000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 3.2e-154 548.9 352 76.7
Glyma.17G134700 Glycine max HOM05D005292 ORTHO05D006473 4.2e-154 548.5 350 78.6
TPR.G37684 Trifolium pratense HOM05D005292 ORTHO05D006473 5.5e-154 548.1 360 76.4
Ciclev10020454m.g Citrus clementina HOM05D005292 ORTHO05D006473 1.2e-153 547.0 347 78.4
arahy.Tifrunner.gnm1.ann1.VS5X7Y Arachis hypogaea HOM05D005292 ORTHO05D006473 1.6e-153 546.6 355 76.3
arahy.Tifrunner.gnm1.ann1.YRMJ3W Arachis hypogaea HOM05D005292 ORTHO05D006473 4.7e-153 545.0 355 76.3
MD04G1079900 Malus domestica HOM05D005292 ORTHO05D006473 4.7e-153 545.0 386 71.8
Nn1g01261 Nelumbo nucifera HOM05D005292 ORTHO05D006473 8.0e-153 544.3 385 71.4
Potri.001G118000 Populus trichocarpa HOM05D005292 ORTHO05D006473 1.4e-152 543.5 348 77.9
Medtr4g102260 Medicago truncatula HOM05D005292 ORTHO05D006473 3.0e-152 542.3 358 74.9
Lalb_Chr05g0225431 Lupinus albus HOM05D005292 ORTHO05D006473 5.2e-152 541.6 352 75.6
Gorai.007G021400 Gossypium raimondii HOM05D005292 ORTHO05D006473 6.8e-152 541.2 351 77.2
Psat4g068120 Pisum sativum HOM05D005292 ORTHO05D006473 1.2e-151 540.4 345 78.0
Gohir.A11G020400 Gossypium hirsutum HOM05D005292 ORTHO05D006473 5.7e-151 538.1 348 77.0
Gorai.003G166300 Gossypium raimondii HOM05D005292 ORTHO05D006473 7.5e-151 537.7 379 71.8
Cc08_g13210 Coffea canephora HOM05D005292 ORTHO05D006473 2.8e-150 535.8 355 74.6
Solyc08g079450.3 Solanum lycopersicum HOM05D005292 ORTHO05D006473 3.7e-150 535.4 345 77.1
CAN.G630.87 Capsicum annuum HOM05D005292 ORTHO05D006473 1.4e-149 533.5 340 77.4
TAR636G1323 Trochodendron aralioides HOM05D005292 ORTHO05D006473 1.4e-149 533.5 344 76.7
Sopen08g027820 Solanum pennellii HOM05D005292 ORTHO05D006473 1.8e-149 533.1 345 76.8
CSS0004035 Camellia sinensis var. sinensis HOM05D005292 ORTHO05D006473 3.1e-149 532.3 357 73.7
Peaxi162Scf00271g00021 Petunia axillaris HOM05D005292 ORTHO05D006473 3.1e-149 532.3 344 75.6
MSTRG.12063 Avicennia marina HOM05D005292 ORTHO05D006473 1.2e-148 530.4 352 74.4
Gohir.D11G020100 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.2e-148 530.4 348 75.9
Oeu016513.1 Olea europaea HOM05D005292 ORTHO05D006473 1.2e-148 530.4 358 75.1
Hma1.2p1_0367F.1_g137040 Hydrangea macrophylla HOM05D005292 ORTHO05D006473 2.7e-148 529.3 343 76.1
THA.LOC104813867 Tarenaya hassleriana HOM05D005292 ORTHO05D006473 2.7e-148 529.3 296 83.8
Nitab4.5_0003534g0020 Nicotiana tabacum HOM05D005292 ORTHO05D006473 5.9e-148 528.1 344 75.3
Eucgr.D01991 Eucalyptus grandis HOM05D005292 ORTHO05D006473 1.0e-147 527.3 339 77.6
RcHm_v2.0_Chr7g0201621 Rosa chinensis HOM05D005292 ORTHO05D006473 1.1e-146 523.9 356 74.7
AL6G47090 Arabidopsis lyrata HOM05D005292 ORTHO05D006473 2.5e-146 522.7 299 82.6
AT4G12230 Arabidopsis thaliana HOM05D005292 ORTHO05D006473 3.3e-146 522.3 299 82.3
CARHR254020 Cardamine hirsuta HOM05D005292 ORTHO05D006473 7.3e-146 521.2 294 83.7
PGSC0003DMG400003959 Solanum tuberosum HOM05D005292 ORTHO05D006473 1.2e-145 520.4 344 75.0
EL10Ac5g12610 Beta vulgaris HOM05D005292 ORTHO05D006473 1.6e-145 520.0 334 75.7
Dinv21573 Davidia involucrata HOM05D005292 ORTHO05D006473 2.1e-145 519.6 387 68.2
FAN04G0899 Fragaria x ananassa HOM05D005292 ORTHO05D006473 2.1e-145 519.6 403 68.7
Lj8A255T56 Lonicera japonica HOM05D005292 ORTHO05D006473 2.1e-145 519.6 353 73.1
Potri.003G114900 Populus trichocarpa HOM05D005292 ORTHO05D006473 2.8e-145 519.2 306 80.7
PGR031G2306 Punica granatum HOM05D005292 ORTHO05D006473 4.7e-145 518.5 313 81.5
FAN13G3324 Fragaria x ananassa HOM05D005292 ORTHO05D006473 1.0e-144 517.3 403 68.5
Hund14648 Selenicereus undatus HOM05D005292 ORTHO05D006473 2.3e-144 516.2 295 82.4
FAN08G1347 Fragaria x ananassa HOM05D005292 ORTHO05D006473 4.0e-144 515.4 398 69.3
Carub.0006s3135 Capsella rubella HOM05D005292 ORTHO05D006473 5.2e-144 515.0 305 79.3
MBI12_g31646_MAGBIO Magnolia biondii HOM05D005292 ORTHO05D006473 5.2e-144 515.0 351 74.4
FAN18G3339 Fragaria x ananassa HOM05D005292 ORTHO05D006473 6.8e-144 514.6 403 68.5
Gohir.A12G220700 Gossypium hirsutum HOM05D005292 ORTHO05D006473 4.4e-143 511.9 323 78.0
ECA233G3282 Erigeron canadensis HOM05D005292 ORTHO05D006473 5.7e-143 511.5 357 72.0
PSO782G2032 Papaver somniferum HOM05D005292 ORTHO05D006473 5.7e-143 511.5 317 78.2
Actinidia02093 Actinidia chinensis HOM05D005292 ORTHO05D006473 9.8e-143 510.8 291 82.1
HanXRQChr02g0046251 Helianthus annuus HOM05D005292 ORTHO05D006473 1.3e-142 510.4 347 72.9
HanXRQChr07g0188671 Helianthus annuus HOM05D005292 ORTHO05D006473 1.3e-142 510.4 348 73.0
Aqoxy7G00654 Aquilegia oxysepala HOM05D005292 ORTHO05D006473 1.7e-142 510.0 336 75.0
Sc22g0000600 Simmondsia chinensis HOM05D005292 ORTHO05D006473 2.9e-142 509.2 320 76.9
AUR62010507 Chenopodium quinoa HOM05D005292 ORTHO05D006473 3.7e-142 508.8 347 70.3
Sp6g05330 Schrenkiella parvula HOM05D005292 ORTHO05D006473 3.7e-142 508.8 300 80.3
BcaC01g04601 Brassica carinata HOM05D005292 ORTHO05D006473 6.4e-142 508.1 290 82.4
Thhalv10028717m.g Eutrema salsugineum HOM05D005292 ORTHO05D006473 1.1e-141 507.3 334 74.9
BcaB01g02654 Brassica carinata HOM05D005292 ORTHO05D006473 1.8e-141 506.5 288 82.3
Nitab4.5_0007591g0040 Nicotiana tabacum HOM05D005292 ORTHO05D006473 2.4e-141 506.1 344 73.3
Migut.A00832 Erythranthe guttata HOM05D005292 ORTHO05D006473 7.0e-141 504.6 398 66.1
A03p29600 Brassica napus HOM05D005292 ORTHO05D006473 9.2e-141 504.2 290 82.4
CDE09G1063 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 9.2e-141 504.2 348 69.5
C03p35880 Brassica napus HOM05D005292 ORTHO05D006473 1.6e-140 503.4 291 82.1
BolC3t15896H Brassica oleracea HOM05D005292 ORTHO05D006473 1.6e-140 503.4 291 82.1
SalBow1G6483 Salvia bowleyana HOM05D005292 ORTHO05D006473 2.0e-140 503.1 327 74.6
BraA03t12155Z Brassica rapa HOM05D005292 ORTHO05D006473 5.9e-140 501.5 288 82.3
SGA_v2.0_scaffold120G32820 Striga asiatica HOM05D005292 ORTHO05D006473 7.8e-140 501.1 375 69.1
DCAR_006803 Daucus carota HOM05D005292 ORTHO05D006473 5.0e-139 498.4 352 71.6
PSO478G4449 Papaver somniferum HOM05D005292 ORTHO05D006473 1.5e-138 496.9 327 74.9
Dinv39082 Davidia involucrata HOM05D005292 ORTHO05D006473 4.3e-138 495.4 345 73.0
Os10g0169800 Oryza sativa ssp. japonica HOM05D005292 ORTHO05D006473 2.1e-137 493.0 334 71.0
Sabra01G0090700 Salix brachista HOM05D005292 ORTHO05D006473 2.8e-137 492.7 483 56.7
Aa31LG9G10310 Aethionema arabicum HOM05D005292 ORTHO05D006473 4.7e-137 491.9 355 69.6
Ah.12g058260 Amaranthus hybridus HOM05D005292 ORTHO05D006473 6.2e-137 491.5 370 66.2
Ah.02g116220 Amaranthus hybridus HOM05D005292 ORTHO05D006473 2.3e-136 489.6 266 83.8
Haze_08610 Corylus avellana HOM05D005292 ORTHO05D006473 5.2e-136 488.4 412 64.6
Nn4g26373 Nelumbo nucifera HOM05D005292 ORTHO05D006473 4.4e-135 485.3 401 64.3
Zm00001eb026990 Zea mays HOM05D005292 ORTHO05D006473 2.4e-133 479.6 299 73.9
vmacro14043 Vaccinium macrocarpon HOM05D005292 ORTHO05D006473 6.6e-131 471.5 329 72.3
AUR62017394 Chenopodium quinoa HOM05D005292 ORTHO05D006473 2.5e-130 469.5 326 69.9
CDE11G0205 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 3.3e-130 469.2 361 65.7
unitig_744.g24320 Utricularia gibba HOM05D005292 ORTHO05D006473 2.8e-129 466.1 357 65.5
Lsat_1_v5_gn_6_9841 Lactuca sativa HOM05D005292 ORTHO05D006473 8.1e-129 464.5 265 82.3
TWI15G0397 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 2.6e-127 459.5 352 67.9
ATR0757G031 Amborella trichopoda HOM05D005292 ORTHO05D006473 4.9e-126 455.3 280 77.1
HPP92_014608 Vanilla planifolia HOM05D005292 ORTHO05D006473 6.2e-121 438.3 299 70.2
SEGI_16146 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 1.2e-116 424.1 377 56.0
Pp3c6_20320 Physcomitrium patens HOM05D005292 ORTHO05D006473 4.3e-114 415.6 296 66.2
Mapoly0066s0051 Marchantia polymorpha HOM05D005292 ORTHO05D006473 1.8e-112 410.2 277 67.5
AagrBONN_evm.TU.Sc2ySwM_368.248 Anthoceros agrestis HOM05D005292 ORTHO05D006473 1.2e-108 397.5 320 60.9
SMO223G0031 Selaginella moellendorffii HOM05D005292 ORTHO05D006473 2.1e-108 396.7 280 65.0
Sabra03G0079600 Salix brachista HOM05D005292 ORTHO05D006473 2.7e-108 396.4 219 84.9
FvH4_5g00640 Fragaria vesca HOM05D005292 ORTHO05D006473 1.0e-107 394.4 339 65.2
Rhsim07G0101700 Rhododendron simsii HOM05D005292 ORTHO05D006473 4.3e-106 389.0 358 58.9
Duzib205G1434 Durio zibethinus HOM05D005292 ORTHO05D006473 9.9e-103 377.9 347 60.2
Oeu022319.3 Olea europaea HOM05D005292 ORTHO05D006473 4.0e-96 355.9 348 57.2
TAR629G1108 Trochodendron aralioides HOM05D005292 ORTHO05D006473 9.9e-95 351.3 191 86.4
Actinidia14462 Actinidia chinensis HOM05D005292 ORTHO05D006473 1.0e-86 324.7 344 53.2
Aa31LG11G5120 Aethionema arabicum HOM05D005292 ORTHO05D006473 1.1e-74 284.6 147 85.7
MELO3C005579.2 Cucumis melo HOM05D005292 ORTHO05D006473 6.9e-72 275.4 220 69.5
MD06G1074900 Malus domestica HOM05D005292 ORTHO05D006473 1.1e-69 268.1 147 82.3
Dinv37766 Davidia involucrata HOM05D005292 ORTHO05D006473 4.1e-64 249.6 246 56.5
Lsat_1_v5_gn_8_156781 Lactuca sativa HOM05D005292 ORTHO05D006473 3.8e-46 189.9 173 59.0
Lsat_1_v5_gn_8_88300 Lactuca sativa HOM05D005292 ORTHO05D006473 3.7e-41 173.3 191 48.7
Lsat_1_v5_gn_2_99060 Lactuca sativa HOM05D005292 ORTHO05D006473 4.8e-41 172.9 120 71.7
SEGI_25328 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 1.6e-36 157.9 94 70.2
Lsat_1_v5_gn_8_99640 Lactuca sativa HOM05D005292 ORTHO05D006473 9.8e-34 148.7 161 51.6
TAR636G3691 Trochodendron aralioides HOM05D005292 ORTHO05D006473 1.7e-33 147.9 127 62.2
SEGI_08273 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 1.9e-29 134.4 84 77.4
Glyma.05G052200 Glycine max HOM05D005292 ORTHO05D006473 3.3e-29 133.7 149 55.7
Cc08_g13200 Coffea canephora HOM05D005292 ORTHO05D006473 8.0e-28 129.0 66 84.8
CDE11G1060 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 5.7e-26 122.9 66 80.3
MD06G1074800 Malus domestica HOM05D005292 ORTHO05D006473 7.0e-24 115.9 72 79.2
SEGI_15988 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 7.8e-23 112.5 65 80.0
TWI81G0363 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 1.5e-21 108.2 71 74.6
Eucgr.C02046 Eucalyptus grandis HOM05D005292 ORTHO05D006473 2.0e-15 87.8 66 68.2
vmacro17465 Vaccinium macrocarpon HOM05D002883 ORTHO05D003116 1.7e-14 84.7 66 60.6
Peaxi162Scf00102g01237 Petunia axillaris HOM05D000023 ORTHO05D013611 1.7e-06 58.2 45 60.0


User provided reference genes

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