Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 1.8e-158 562.8 328 100.0
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 4.2e-144 515.0 328 90.5
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 4.7e-143 511.5 328 89.6
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 7.5e-141 504.2 328 89.3
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 1.5e-133 479.9 327 70.6
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 5.7e-133 478.0 324 85.5
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 2.9e-132 475.7 328 85.4
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 1.8e-131 473.0 324 84.3
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 2.4e-131 472.6 321 70.7
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 5.4e-131 471.5 324 85.2
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 1.6e-130 469.9 328 83.8
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 1.6e-130 469.9 328 81.1
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 1.3e-129 466.8 328 83.2
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 1.7e-129 466.5 324 84.0
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 3.0e-129 465.7 323 83.9
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 3.0e-129 465.7 324 83.3
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 5.0e-129 464.9 324 74.7
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 8.6e-129 464.2 324 83.0
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 1.5e-128 463.4 324 84.3
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 1.9e-128 463.0 328 82.9
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 2.5e-128 462.6 324 85.2
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 3.3e-128 462.2 324 67.9
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 4.3e-128 461.8 324 83.6
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 5.6e-128 461.5 325 69.2
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 5.6e-128 461.5 324 83.0
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 7.3e-128 461.1 328 82.3
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 2.1e-127 459.5 324 79.6
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 2.1e-127 459.5 324 84.0
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 2.8e-127 459.1 324 82.7
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 3.6e-127 458.8 328 68.6
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 3.6e-127 458.8 322 67.7
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 8.0e-127 457.6 322 83.2
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 1.0e-126 457.2 324 67.3
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 1.0e-126 457.2 324 82.4
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 3.1e-126 455.7 328 81.7
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 6.8e-126 454.5 328 81.1
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 8.9e-126 454.1 328 79.6
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 8.9e-126 454.1 326 65.3
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 1.2e-125 453.8 324 83.6
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 4.4e-125 451.8 327 81.7
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 5.8e-125 451.4 325 67.4
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 1.3e-124 450.3 324 71.0
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 3.7e-124 448.7 324 68.8
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 3.7e-124 448.7 328 73.5
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 3.7e-124 448.7 324 79.0
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 4.9e-124 448.4 324 80.6
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 6.4e-124 448.0 324 65.7
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 6.4e-124 448.0 324 69.1
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 8.3e-124 447.6 324 80.6
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 2.4e-123 446.0 328 81.1
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 2.4e-123 446.0 328 65.5
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 4.1e-123 445.3 323 64.7
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 4.1e-123 445.3 324 80.9
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 5.4e-123 444.9 324 77.2
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 7.0e-123 444.5 324 81.2
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 7.0e-123 444.5 327 80.4
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 7.0e-123 444.5 324 66.0
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 9.2e-123 444.1 327 80.1
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.6e-122 443.4 327 80.1
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 2.7e-122 442.6 322 80.7
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 2.7e-122 442.6 324 79.9
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 6.0e-122 441.4 327 73.1
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 1.7e-121 439.9 323 78.9
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 1.7e-121 439.9 328 64.9
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 1.7e-121 439.9 324 66.0
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 2.3e-121 439.5 322 79.2
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 3.9e-121 438.7 236 85.2
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 6.6e-121 438.0 324 64.8
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 8.6e-121 437.6 324 80.6
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 9.5e-120 434.1 326 77.9
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 2.8e-119 432.6 323 71.8
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 3.6e-119 432.2 326 64.1
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 4.7e-119 431.8 326 63.8
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 1.4e-118 430.3 326 67.8
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 1.4e-118 430.3 323 62.2
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 1.8e-118 429.9 326 63.5
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 3.1e-118 429.1 326 63.8
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 3.1e-118 429.1 326 63.2
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 3.1e-118 429.1 322 63.0
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 4.0e-118 428.7 236 81.4
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 1.5e-117 426.8 236 83.1
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.5e-117 426.8 325 63.1
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 3.4e-117 425.6 327 77.7
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 4.4e-117 425.2 326 62.9
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 4.4e-117 425.2 329 75.7
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 2.9e-116 422.5 332 75.3
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 2.9e-116 422.5 236 80.9
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 6.4e-116 421.4 366 56.8
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 1.5e-112 410.2 324 60.5
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 3.1e-110 402.5 234 78.2
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 1.5e-109 400.2 320 75.6
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 2.9e-108 396.0 324 58.6
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.2e-106 390.6 311 74.3
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 6.0e-106 388.3 320 58.8
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 2.8e-103 379.4 328 72.9
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 2.4e-102 376.3 335 57.9
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 5.4e-99 365.2 325 53.8
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 2.1e-95 353.2 323 70.0
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 3.6e-95 352.4 320 69.1
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 1.9e-91 340.1 258 65.1
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 6.6e-89 331.6 263 79.8
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 2.5e-88 329.7 261 79.3
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 1.3e-87 327.4 275 77.8
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.9e-80 303.5 244 62.7
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 6.2e-79 298.5 249 78.3
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 8.4e-76 288.1 251 74.9
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 4.3e-72 275.8 374 39.3
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 6.7e-65 251.9 228 56.6
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 3.7e-63 246.1 244 68.9
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 9.1e-62 241.5 191 62.3
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 1.9e-59 233.8 327 45.9
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 2.1e-58 230.3 192 56.2
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 5.1e-57 225.7 138 73.9
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 3.6e-50 203.0 124 71.8
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 1.8e-49 200.7 126 71.4
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 3.3e-40 169.9 94 78.7
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 2.3e-17 94.0 87 58.6
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 4.0e-17 93.2 83 51.8
MELO3C023799.2 Cucumis melo HOM05D006600 ORTHO05D168989 1.2e-08 65.1 40 80.0
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 3.4e-08 63.5 95 42.1
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 8.3e-07 58.9 37 73.0
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 3.2e-06 57.0 42 64.3
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 9.2e-06 55.5 151 29.1


User provided reference genes

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