Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 1.6e-135 486.1 246 100.0
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 6.1e-111 404.4 217 88.0
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 1.8e-107 392.9 217 86.2
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 1.3e-92 343.6 207 72.9
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 1.7e-92 343.2 209 74.2
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 1.1e-91 340.5 213 70.9
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 1.8e-91 339.7 209 74.6
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 1.8e-91 339.7 210 72.4
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 2.6e-90 335.9 211 73.0
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 3.5e-90 335.5 209 72.2
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 7.7e-90 334.3 209 71.8
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 6.1e-87 324.7 209 71.3
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 2.3e-86 322.8 213 68.5
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 1.5e-85 320.1 210 69.0
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 1.5e-85 320.1 209 68.4
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 3.3e-85 318.9 207 71.0
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 7.5e-85 317.8 216 68.5
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.3e-84 317.0 210 69.5
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.3e-84 317.0 207 69.6
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 2.2e-84 316.2 211 69.2
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 6.3e-84 314.7 210 72.9
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 3.1e-83 312.4 206 69.9
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 5.5e-80 301.6 213 67.6
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 1.6e-79 300.1 235 60.0
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 2.3e-78 296.2 223 62.3
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 5.2e-78 295.0 216 62.5
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 2.0e-77 293.1 206 63.1
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 7.5e-77 291.2 213 62.9
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 2.2e-76 289.7 219 62.6
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 2.2e-76 289.7 206 63.6
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 6.3e-76 288.1 208 63.5
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 8.3e-76 287.7 209 62.7
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 3.1e-75 285.8 209 60.8
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 5.9e-74 281.6 201 62.2
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 3.2e-72 275.8 206 62.6
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 1.4e-70 270.4 204 61.8
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 1.8e-70 270.0 171 70.2
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 1.2e-69 267.3 216 57.9
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 7.5e-69 264.6 231 57.1
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 1.7e-68 263.5 252 53.2
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 6.3e-68 261.5 207 56.5
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 6.3e-68 261.5 209 61.2
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 8.3e-68 261.2 200 60.0
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 1.1e-67 260.8 206 56.3
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 1.6e-66 256.9 205 58.5
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 4.3e-64 248.8 206 57.8
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 3.9e-57 225.7 162 63.0
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 2.5e-56 223.0 177 54.8
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 3.1e-54 216.1 122 73.8
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 5.2e-54 215.3 148 65.5
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 5.8e-53 211.8 141 69.5
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 3.2e-51 206.1 244 43.0
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 7.0e-51 204.9 124 74.2
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 4.6e-50 202.2 125 68.0
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 1.3e-49 200.7 204 49.0
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 3.0e-49 199.5 124 69.4
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.1e-48 197.6 232 43.5
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 7.5e-45 184.9 208 47.1
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 1.4e-43 180.6 126 60.3
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 2.4e-43 179.9 112 67.9
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 3.5e-42 176.0 105 71.4
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 6.0e-42 175.3 208 43.3
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 1.0e-41 174.5 105 66.7
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 1.3e-41 174.1 122 59.0
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 6.6e-41 171.8 108 67.6
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 1.9e-40 170.2 109 67.0
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 1.4e-38 164.1 196 40.3
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 4.4e-37 159.1 198 40.4
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 4.9e-36 155.6 105 65.7
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 1.9e-35 153.7 107 67.3
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 7.1e-35 151.8 98 63.3
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 3.0e-33 146.4 203 39.9
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 3.0e-33 146.4 98 64.3
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 3.9e-33 146.0 87 73.6
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 4.3e-32 142.5 105 61.0
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 8.1e-31 138.3 107 55.1
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.6e-26 124.0 193 37.3
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 3.0e-25 119.8 195 35.9
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 4.3e-24 115.9 84 66.7
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 2.8e-23 113.2 74 66.2
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 8.1e-23 111.7 100 52.0
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 3.1e-22 109.8 199 35.2
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 1.5e-21 107.5 199 33.2
Cc03_g07020 Coffea canephora HOM05D007543 ORTHO05D009555 4.8e-15 85.9 62 66.1
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.6e-13 80.1 127 38.6
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 4.5e-13 79.3 211 29.4
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 3.9e-09 66.2 53 64.2
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 1.9e-08 63.9 48 70.8
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 2.5e-08 63.5 46 67.4
FAN12G3210 Fragaria x ananassa HOM05D007543 ORTHO05D009555 1.6e-07 60.8 37 73.0
Sopen09g034130 Solanum pennellii HOM05D007543 ORTHO05D009555 1.6e-07 60.8 48 68.8
Potri.010G061000 Populus trichocarpa HOM05D007543 ORTHO05D009555 3.7e-07 59.7 47 63.8
MBI10_g16797_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 4.0e-06 56.2 46 63.0
Migut.G00601 Erythranthe guttata HOM05D007543 ORTHO05D009555 6.9e-06 55.5 51 56.9


User provided reference genes

Program Settings