Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 6.1e-98 360.9 195 100.0
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 8.9e-65 250.8 195 76.4
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 3.7e-63 245.4 198 74.2
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 1.2e-61 240.4 202 71.8
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 8.6e-60 234.2 176 77.3
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 2.1e-45 186.4 197 62.9
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.1e-43 180.6 195 61.5
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 1.9e-43 179.9 197 59.4
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 2.8e-42 176.0 202 60.9
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 5.2e-41 171.8 194 58.8
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.2e-40 170.6 197 58.9
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 1.2e-40 170.6 201 55.7
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.2e-40 170.6 197 57.4
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 2.0e-40 169.9 196 57.7
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 2.6e-40 169.5 195 56.4
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 3.4e-40 169.1 202 56.9
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 7.6e-40 167.9 198 56.6
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 1.3e-39 167.2 196 57.7
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 8.4e-39 164.5 196 55.6
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.1e-38 164.1 200 56.0
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 1.1e-38 164.1 196 55.1
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 1.9e-38 163.3 198 55.1
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 1.9e-38 163.3 202 55.9
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 4.1e-38 162.2 202 54.5
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 5.4e-38 161.8 197 56.3
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 5.4e-38 161.8 197 56.3
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 1.2e-37 160.6 198 55.6
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 2.7e-37 159.5 195 55.4
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 6.0e-37 158.3 160 63.8
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 7.8e-37 157.9 202 54.5
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 1.0e-36 157.5 194 55.7
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 1.7e-36 156.8 199 54.8
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 3.0e-36 156.0 203 55.2
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 3.9e-36 155.6 219 54.3
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 5.1e-36 155.2 194 52.6
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 5.1e-36 155.2 183 54.6
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 1.9e-35 153.3 196 55.1
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 2.5e-35 152.9 196 52.0
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 4.3e-35 152.1 197 53.3
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 4.3e-35 152.1 199 53.3
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 5.6e-35 151.8 200 55.0
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 9.6e-35 151.0 196 55.1
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 9.6e-35 151.0 198 55.1
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 1.6e-34 150.2 175 57.7
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 2.1e-34 149.8 202 53.0
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 3.6e-34 149.1 195 53.3
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 3.6e-34 149.1 180 56.7
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 6.2e-34 148.3 205 51.2
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 8.1e-34 147.9 196 53.6
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 8.1e-34 147.9 195 53.8
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 3.1e-33 146.0 182 52.2
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 4.0e-33 145.6 196 53.1
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 4.0e-33 145.6 198 51.0
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 5.2e-33 145.2 199 52.3
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 9.0e-33 144.4 195 52.8
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 9.0e-33 144.4 195 53.8
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 1.2e-32 144.1 197 52.3
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 2.0e-32 143.3 160 55.0
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 2.0e-32 143.3 183 54.1
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 2.2e-31 139.8 193 49.2
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 2.2e-31 139.8 194 49.0
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 2.2e-31 139.8 196 49.0
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 2.9e-31 139.4 201 49.8
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 2.9e-31 139.4 125 67.2
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 3.8e-31 139.0 125 67.2
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 1.1e-30 137.5 138 63.0
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.1e-30 137.5 138 63.0
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.1e-30 137.5 138 63.0
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.4e-30 137.1 150 54.7
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.9e-30 136.7 138 63.0
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.4e-30 136.3 138 62.3
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 2.4e-30 136.3 197 49.2
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 5.4e-30 135.2 201 50.7
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 5.4e-30 135.2 194 50.0
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 9.3e-30 134.4 197 48.2
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.2e-29 134.0 198 49.5
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 1.6e-29 133.7 210 45.2
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 2.1e-29 133.3 204 46.1
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 2.7e-29 132.9 148 56.1
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 2.7e-29 132.9 196 52.0
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 4.6e-29 132.1 200 47.5
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 4.6e-29 132.1 193 50.3
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 1.0e-28 131.0 200 47.5
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 2.3e-28 129.8 200 47.5
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 2.3e-28 129.8 173 52.0
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 3.0e-28 129.4 199 47.2
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 3.9e-28 129.0 200 47.0
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 3.9e-28 129.0 180 48.9
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 3.9e-28 129.0 194 49.5
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 5.1e-28 128.6 200 48.0
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 6.6e-28 128.3 133 57.9
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 6.6e-28 128.3 199 48.2
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 8.7e-28 127.9 199 47.7
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 1.9e-27 126.7 136 58.8
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 3.3e-27 125.9 151 51.7
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 3.3e-27 125.9 112 67.9
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 4.3e-27 125.6 197 46.2
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 4.3e-27 125.6 186 47.8
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 4.3e-27 125.6 218 44.5
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 5.6e-27 125.2 207 45.9
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 9.6e-27 124.4 192 49.0
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 1.6e-26 123.6 204 44.6
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 1.6e-26 123.6 195 49.2
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 1.6e-26 123.6 132 59.1
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 6.2e-26 121.7 110 65.5
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 1.8e-25 120.2 135 54.1
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 1.2e-24 117.5 218 43.6
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 1.5e-24 117.1 131 49.6
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 2.0e-24 116.7 97 69.1
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 2.0e-24 116.7 174 47.1
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 2.6e-24 116.3 110 61.8
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 6.2e-18 95.1 139 48.2
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 5.8e-16 88.6 104 51.0
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 1.1e-14 84.3 128 43.0
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.9e-14 83.6 148 37.8
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 1.6e-13 80.5 104 48.1
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 1.8e-12 77.0 103 49.5
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 5.1e-12 75.5 142 40.8
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 1.5e-11 73.9 75 57.3
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.8e-10 69.7 67 62.7
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 1.4e-09 67.4 83 47.0
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 6.9e-09 65.1 106 39.6
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 2.6e-08 63.2 66 54.5
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 8.4e-07 58.2 66 50.0
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 3.2e-06 56.2 60 50.0


User provided reference genes

Program Settings