Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003750 Sechium edule HOM05D006869 ORTHO05D008641 1.0e-24 117.1 132 100.0
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 7.4e-15 84.3 132 43.9
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 7.7e-12 74.3 126 41.3
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 7.7e-12 74.3 126 41.3
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 8.5e-11 70.9 45 86.7
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 7.2e-10 67.8 52 73.1
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 5.2e-08 61.6 50 68.0
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 1.2e-07 60.5 48 62.5
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 2.6e-07 59.3 51 60.8
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 4.4e-07 58.5 51 60.8
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 5.7e-07 58.2 53 66.0
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 5.7e-07 58.2 53 66.0
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 7.5e-07 57.8 53 64.2
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 9.7e-07 57.4 52 65.4
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 9.7e-07 57.4 50 62.0
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 1.3e-06 57.0 53 64.2
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 1.3e-06 57.0 53 64.2
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 1.3e-06 57.0 53 64.2
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 1.3e-06 57.0 53 54.7
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.7e-06 56.6 53 66.0
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 1.7e-06 56.6 46 63.0
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 2.2e-06 56.2 43 67.4
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 2.2e-06 56.2 43 67.4
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 2.2e-06 56.2 58 56.9
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 2.2e-06 56.2 48 62.5
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 2.8e-06 55.8 62 53.2
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 2.8e-06 55.8 55 61.8
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 2.8e-06 55.8 59 57.6
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 3.7e-06 55.5 53 62.3
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 3.7e-06 55.5 47 59.6
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 4.8e-06 55.1 50 60.0
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 4.8e-06 55.1 54 59.3
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 4.8e-06 55.1 44 65.9
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 6.3e-06 54.7 47 61.7
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 6.3e-06 54.7 54 61.1
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 6.3e-06 54.7 47 59.6
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 6.3e-06 54.7 52 53.8
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 8.2e-06 54.3 50 56.0
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 8.2e-06 54.3 43 65.1


User provided reference genes

Program Settings