Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003732 Sechium edule HOM05D006882 ORTHO05D008688 2.2e-73 278.9 144 100.0
CsaV3_4G009150 Cucumis sativus L. HOM05D006882 ORTHO05D008688 1.3e-25 120.2 71 83.1
ClCG07G016320 Citrullus lanatus HOM05D006882 ORTHO05D008688 3.3e-24 115.5 206 41.7
Phvul.004G037300 Phaseolus vulgaris HOM05D006882 ORTHO05D008688 2.6e-13 79.3 97 45.4
Thecc.04G095700 Theobroma cacao HOM05D006882 ORTHO05D008688 3.4e-13 79.0 63 63.5
Manes.01G096000 Manihot esculenta HOM05D006882 ORTHO05D008688 4.5e-13 78.6 109 46.8
PGR004G1649 Punica granatum HOM05D006882 ORTHO05D008688 4.5e-13 78.6 98 46.9
COL.COLO4_04934 Corchorus olitorius HOM05D006882 ORTHO05D008688 5.8e-13 78.2 114 43.9
VMungo0464G1672 Vigna mungo HOM05D006882 ORTHO05D008688 5.8e-13 78.2 99 45.5
CANSAT64G2010 Cannabis sativa HOM05D006882 ORTHO05D008688 7.6e-13 77.8 65 60.0
Eucgr.I02034 Eucalyptus grandis HOM05D006882 ORTHO05D008688 7.6e-13 77.8 106 42.5
Cfa007668 Carpinus fangiana HOM05D006882 ORTHO05D008688 9.9e-13 77.4 58 62.1
Glyma.13G056500 Glycine max HOM05D006882 ORTHO05D008688 9.9e-13 77.4 74 55.4
Dinv34941 Davidia involucrata HOM05D006882 ORTHO05D008688 1.3e-12 77.0 59 62.7
arahy.Tifrunner.gnm1.ann1.PJ6ZH1 Arachis hypogaea HOM05D006882 ORTHO05D008688 2.2e-12 76.3 69 56.5
arahy.Tifrunner.gnm1.ann1.YR6PCG Arachis hypogaea HOM05D006882 ORTHO05D008688 2.2e-12 76.3 69 56.5
CsaV3_5G014380 Cucumis sativus L. HOM05D006882 ORTHO05D008688 2.2e-12 76.3 78 56.4
Dinv33828 Davidia involucrata HOM05D006882 ORTHO05D008688 2.2e-12 76.3 55 67.3
Duzib187G0261 Durio zibethinus HOM05D006882 ORTHO05D008688 3.8e-12 75.5 77 50.6
Psat1g068840 Pisum sativum HOM05D006882 ORTHO05D008688 3.8e-12 75.5 62 58.1
QL02p067584 Quercus lobata HOM05D006882 ORTHO05D008688 3.8e-12 75.5 58 60.3
Sc14g0006330 Simmondsia chinensis HOM05D006882 ORTHO05D008688 3.8e-12 75.5 55 67.3
GSVIVG01032906001 Vitis vinifera HOM05D006882 ORTHO05D008688 3.8e-12 75.5 62 59.7
Haze_14430 Corylus avellana HOM05D006882 ORTHO05D008688 4.9e-12 75.1 58 60.3
Gohir.A11G072700 Gossypium hirsutum HOM05D006882 ORTHO05D008688 4.9e-12 75.1 63 60.3
Gohir.D11G077000 Gossypium hirsutum HOM05D006882 ORTHO05D008688 4.9e-12 75.1 63 60.3
Gorai.007G082700 Gossypium raimondii HOM05D006882 ORTHO05D008688 4.9e-12 75.1 63 60.3
Prupe.3G254900 Prunus persica HOM05D006882 ORTHO05D008688 4.9e-12 75.1 47 76.6
Cc07_g04230 Coffea canephora HOM05D006882 ORTHO05D008688 6.4e-12 74.7 47 80.9
Duzib147G0673 Durio zibethinus HOM05D006882 ORTHO05D008688 6.4e-12 74.7 61 59.0
Glyma.19G030100 Glycine max HOM05D006882 ORTHO05D008688 6.4e-12 74.7 95 46.3
Lalb_Chr06g0174961 Lupinus albus HOM05D006882 ORTHO05D008688 1.1e-11 73.9 57 63.2
Sabra17G0083000 Salix brachista HOM05D006882 ORTHO05D008688 1.1e-11 73.9 93 41.9
TPR.G10007 Trifolium pratense HOM05D006882 ORTHO05D008688 1.1e-11 73.9 63 55.6
Ah.12g062710 Amaranthus hybridus HOM05D006882 ORTHO05D008688 1.4e-11 73.6 50 68.0
CiPaw.03G088500 Carya illinoinensis HOM05D006882 ORTHO05D008688 1.4e-11 73.6 98 44.9
Potri.017G094200 Populus trichocarpa HOM05D006882 ORTHO05D008688 1.4e-11 73.6 60 56.7
TAR371G1018 Trochodendron aralioides HOM05D006882 ORTHO05D008688 1.9e-11 73.2 56 58.9
AT3G02120 Arabidopsis thaliana HOM05D006882 ORTHO05D008688 2.4e-11 72.8 57 59.6
RcHm_v2.0_Chr2g0165841 Rosa chinensis HOM05D006882 ORTHO05D008688 2.4e-11 72.8 56 62.5
Atru.chr8.430 Acer truncatum HOM05D006882 ORTHO05D008688 3.2e-11 72.4 93 45.2
vmacro05638 Vaccinium macrocarpon HOM05D006882 ORTHO05D008688 3.2e-11 72.4 73 50.7
Duzib264G0735 Durio zibethinus HOM05D006882 ORTHO05D008688 4.2e-11 72.0 89 46.1
Hma1.2p1_0481F.1_g162213 Hydrangea macrophylla HOM05D006882 ORTHO05D008688 4.2e-11 72.0 58 65.5
TWI34G0355 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 4.2e-11 72.0 52 69.2
AL3G11350 Arabidopsis lyrata HOM05D006882 ORTHO05D008688 7.1e-11 71.2 57 57.9
Ciclev10003349m.g Citrus clementina HOM05D006882 ORTHO05D008688 7.1e-11 71.2 61 60.7
FAN05G2472 Fragaria x ananassa HOM05D006882 ORTHO05D008688 7.1e-11 71.2 54 63.0
Hund13139 Selenicereus undatus HOM05D006882 ORTHO05D008688 7.1e-11 71.2 123 37.4
Migut.H00624 Erythranthe guttata HOM05D006882 ORTHO05D008688 1.6e-10 70.1 58 60.3
Gohir.D09G008650 Gossypium hirsutum HOM05D006882 ORTHO05D008688 1.6e-10 70.1 73 50.7
Potri.004G120200 Populus trichocarpa HOM05D006882 ORTHO05D008688 1.6e-10 70.1 66 50.0
TWI60G1503 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 1.6e-10 70.1 95 43.2
Carub.0003s0123 Capsella rubella HOM05D006882 ORTHO05D008688 2.1e-10 69.7 57 56.1
AUR62038673 Chenopodium quinoa HOM05D006882 ORTHO05D008688 2.1e-10 69.7 57 63.2
Ciclev10013137m.g Citrus clementina HOM05D006882 ORTHO05D008688 2.1e-10 69.7 62 59.7
DCAR_025431 Daucus carota HOM05D006882 ORTHO05D008688 2.1e-10 69.7 38 78.9
Ciclev10003470m.g Citrus clementina HOM05D006882 ORTHO05D008688 2.7e-10 69.3 61 59.0
Ciclev10027312m.g Citrus clementina HOM05D006882 ORTHO05D008688 2.7e-10 69.3 61 59.0
FvH4_6g46850 Fragaria vesca HOM05D006882 ORTHO05D008688 2.7e-10 69.3 56 60.7
FAN09G3572 Fragaria x ananassa HOM05D006882 ORTHO05D008688 2.7e-10 69.3 56 60.7
FAN14G0989 Fragaria x ananassa HOM05D006882 ORTHO05D008688 2.7e-10 69.3 56 60.7
Gorai.006G010400 Gossypium raimondii HOM05D006882 ORTHO05D008688 2.7e-10 69.3 73 50.7
Manes.02G055100 Manihot esculenta HOM05D006882 ORTHO05D008688 2.7e-10 69.3 65 53.8
THA.LOC104822332 Tarenaya hassleriana HOM05D006882 ORTHO05D008688 2.7e-10 69.3 56 57.1
MSTRG.23884 Avicennia marina HOM05D006882 ORTHO05D008688 3.5e-10 68.9 62 53.2
Lj2g0004633 Lotus japonicus HOM05D006882 ORTHO05D008688 3.5e-10 68.9 100 42.0
Oeu062161.1 Olea europaea HOM05D006882 ORTHO05D008688 4.6e-10 68.6 59 54.2
Sp3g01180 Schrenkiella parvula HOM05D006882 ORTHO05D008688 4.6e-10 68.6 66 54.5
PGSC0003DMG400001358 Solanum tuberosum HOM05D006882 ORTHO05D008688 6.0e-10 68.2 66 56.1
Aqoxy3G00507 Aquilegia oxysepala HOM05D006882 ORTHO05D008688 7.9e-10 67.8 71 53.5
AUR62018188 Chenopodium quinoa HOM05D006882 ORTHO05D008688 7.9e-10 67.8 58 62.1
FAN02G1963 Fragaria x ananassa HOM05D006882 ORTHO05D008688 7.9e-10 67.8 56 60.7
SalBow1G1386 Salvia bowleyana HOM05D006882 ORTHO05D008688 7.9e-10 67.8 60 55.0
SalBow1G4555 Salvia bowleyana HOM05D006882 ORTHO05D008688 7.9e-10 67.8 60 55.0
Aa31LG5G12650 Aethionema arabicum HOM05D006882 ORTHO05D008688 1.3e-09 67.0 56 53.6
MSTRG.2998 Avicennia marina HOM05D006882 ORTHO05D008688 1.8e-09 66.6 39 74.4
CARHR076080 Cardamine hirsuta HOM05D006882 ORTHO05D008688 1.8e-09 66.6 65 53.8
Glyma.01G085200 Glycine max HOM05D006882 ORTHO05D008688 1.8e-09 66.6 76 50.0
MD17G1059700 Malus domestica HOM05D006882 ORTHO05D008688 1.8e-09 66.6 87 44.8
Ca_04305_v3 Cicer arietinum L. HOM05D006882 ORTHO05D008688 2.3e-09 66.2 73 50.7
Rhsim10G0049600 Rhododendron simsii HOM05D006882 ORTHO05D008688 2.3e-09 66.2 77 45.5
Medtr6g015280 Medicago truncatula HOM05D006882 ORTHO05D008688 3.9e-09 65.5 61 55.7
Medtr6g015260 Medicago truncatula HOM05D006882 ORTHO05D008688 5.1e-09 65.1 61 54.1
Peaxi162Scf00166g00424 Petunia axillaris HOM05D006882 ORTHO05D008688 8.7e-09 64.3 60 58.3
Lsat_1_v5_gn_2_90100 Lactuca sativa HOM05D006882 ORTHO05D008688 1.1e-08 63.9 46 67.4
A09p35030 Brassica napus HOM05D006882 ORTHO05D008688 1.5e-08 63.5 40 70.0
HanXRQChr07g0199771 Helianthus annuus HOM05D006882 ORTHO05D008688 1.9e-08 63.2 37 75.7
ECA238G0863 Erigeron canadensis HOM05D006882 ORTHO05D008688 2.5e-08 62.8 46 65.2
Solyc02g088830.4 Solanum lycopersicum HOM05D006882 ORTHO05D008688 2.5e-08 62.8 52 65.4
Sopen02g033540 Solanum pennellii HOM05D006882 ORTHO05D008688 2.5e-08 62.8 52 65.4
BcaB07g32783 Brassica carinata HOM05D006882 ORTHO05D008688 3.3e-08 62.4 38 71.1
BcaC05g27151 Brassica carinata HOM05D006882 ORTHO05D008688 3.3e-08 62.4 38 71.1
C05p30380 Brassica napus HOM05D006882 ORTHO05D008688 3.3e-08 62.4 38 71.1
BolC5t31777H Brassica oleracea HOM05D006882 ORTHO05D008688 3.3e-08 62.4 38 71.1
Gohir.A09G009600 Gossypium hirsutum HOM05D006882 ORTHO05D008688 3.3e-08 62.4 73 49.3
MD09G1066800 Malus domestica HOM05D006882 ORTHO05D008688 5.6e-08 61.6 125 36.8
Nitab4.5_0003841g0040 Nicotiana tabacum HOM05D006882 ORTHO05D008688 7.4e-08 61.2 86 44.2
Lsat_1_v5_gn_4_172620 Lactuca sativa HOM05D006882 ORTHO05D048217 2.8e-07 59.3 48 60.4
MELO3C024878.2 Cucumis melo HOM05D006882 ORTHO05D008688 6.2e-07 58.2 32 84.4
Cpa.g.sc14.176 Carica papaya HOM05D006882 ORTHO05D008688 1.1e-06 57.4 106 38.7
BraA09t39034Z Brassica rapa HOM05D006882 ORTHO05D008688 1.8e-06 56.6 109 40.4
ATR0177G043 Amborella trichopoda HOM05D006882 ORTHO05D008688 2.4e-06 56.2 62 50.0
MBI16_g10826_MAGBIO Magnolia biondii HOM05D006882 ORTHO05D008688 3.1e-06 55.8 57 49.1
CDE04G1794 Ceratophyllum demersum HOM05D006882 ORTHO05D008688 4.0e-06 55.5 34 67.6
Nn1g08730 Nelumbo nucifera HOM05D006882 ORTHO05D008688 4.0e-06 55.5 38 65.8
Peaxi162Scf00298g00055 Petunia axillaris HOM05D006882 ORTHO05D008688 6.9e-06 54.7 59 54.2
Mapoly0103s0008 Marchantia polymorpha HOM05D022139 ORTHO05D008688 9.0e-06 54.3 41 65.9


User provided reference genes

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