Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003670 Sechium edule HOM05D001798 ORTHO05D022392 1.0e-61 240.0 128 100.0
ClCG10G000980 Citrullus lanatus HOM05D001798 ORTHO05D022392 1.3e-32 143.3 127 60.6
MELO3C013791.2 Cucumis melo HOM05D001798 ORTHO05D022392 2.2e-32 142.5 127 60.6
CsaV3_3G001020 Cucumis sativus L. HOM05D001798 ORTHO05D022392 3.0e-21 105.5 110 57.3
ClCG10G000950 Citrullus lanatus HOM05D001798 ORTHO05D022392 6.5e-16 87.8 116 46.6
Manes.16G135500 Manihot esculenta HOM05D001798 ORTHO05D005040 1.4e-13 80.1 128 48.4
COL.COLO4_19032 Corchorus olitorius HOM05D001798 ORTHO05D005040 8.8e-13 77.4 128 45.3
Duzib168G0008 Durio zibethinus HOM05D001798 ORTHO05D005040 2.2e-11 72.8 108 49.1
Atru.chr7.2645 Acer truncatum HOM05D001798 ORTHO05D005040 8.3e-11 70.9 120 43.3
QL12p025154 Quercus lobata HOM05D001798 ORTHO05D005040 3.1e-10 68.9 129 42.6
Duzib187G0913 Durio zibethinus HOM05D001798 ORTHO05D005040 4.1e-10 68.6 120 43.3
Manes.03G004000 Manihot esculenta HOM05D001798 ORTHO05D005040 5.4e-10 68.2 121 44.6
Potri.018G006800 Populus trichocarpa HOM05D001798 ORTHO05D005040 2.0e-09 66.2 132 40.2
Dinv41255 Davidia involucrata HOM05D001798 ORTHO05D004054 2.7e-09 65.9 116 44.0
Gohir.D06G107900 Gossypium hirsutum HOM05D001798 ORTHO05D005040 3.5e-09 65.5 128 39.8
Gorai.010G122600 Gossypium raimondii HOM05D001798 ORTHO05D005040 3.5e-09 65.5 131 38.9
Manes.14G151300 Manihot esculenta HOM05D001798 ORTHO05D005040 3.5e-09 65.5 134 40.3
CiPaw.08G019800 Carya illinoinensis HOM05D001798 ORTHO05D005040 4.5e-09 65.1 125 43.2
ClCG10G000970 Citrullus lanatus HOM05D001798 ORTHO05D022392 5.9e-09 64.7 113 42.5
Haze_19626 Corylus avellana HOM05D001798 ORTHO05D005040 7.7e-09 64.3 124 41.1
TWI34G0376 Tripterygium wilfordii HOM05D001798 ORTHO05D005040 7.7e-09 64.3 116 42.2
THA.LOC104811795 Tarenaya hassleriana HOM05D001798 ORTHO05D005040 1.0e-08 63.9 132 38.6
Thecc.09G007300 Theobroma cacao HOM05D001798 ORTHO05D005040 1.0e-08 63.9 87 47.1
Cfa013270 Carpinus fangiana HOM05D001798 ORTHO05D005040 1.3e-08 63.5 114 44.7
Gohir.A06G105500 Gossypium hirsutum HOM05D001798 ORTHO05D005040 1.3e-08 63.5 130 38.5
Sabra18G0014500 Salix brachista HOM05D000280 ORTHO05D006100 1.7e-08 63.2 122 40.2
Cfa016621 Carpinus fangiana HOM05D001798 ORTHO05D005040 2.9e-08 62.4 124 40.3
TWI34G1338 Tripterygium wilfordii HOM05D001798 ORTHO05D005040 3.8e-08 62.0 118 42.4
CSS0019887 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 5.0e-08 61.6 132 40.2
CSS0022506 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 5.0e-08 61.6 132 40.2
Haze_21738 Corylus avellana HOM05D001798 ORTHO05D005040 5.0e-08 61.6 114 43.9
Haze_21741 Corylus avellana HOM05D001798 ORTHO05D005040 5.0e-08 61.6 115 43.5
Duzib150G1419 Durio zibethinus HOM05D001798 ORTHO05D005040 5.0e-08 61.6 131 40.5
Glyma.13G095700 Glycine max HOM05D001798 ORTHO05D005040 6.5e-08 61.2 129 39.5
Potri.018G094100 Populus trichocarpa HOM05D001798 ORTHO05D005040 6.5e-08 61.2 121 39.7
CSS0005198 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 8.5e-08 60.8 132 40.2
CSS0011185 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 8.5e-08 60.8 132 40.2
Haze_21742 Corylus avellana HOM05D001798 ORTHO05D005040 8.5e-08 60.8 114 43.9
MD12G1161200 Malus domestica HOM05D001798 ORTHO05D005040 8.5e-08 60.8 133 41.4
Potri.006G273500 Populus trichocarpa HOM05D001798 ORTHO05D005040 8.5e-08 60.8 121 40.5
Potri.006G273566 Populus trichocarpa HOM05D001798 ORTHO05D005040 8.5e-08 60.8 121 40.5
Prupe.1G087800 Prunus persica HOM05D001798 ORTHO05D005040 8.5e-08 60.8 141 41.1
QL02p097578 Quercus lobata HOM05D001798 ORTHO05D005040 1.1e-07 60.5 124 38.7
FAN20G2332 Fragaria x ananassa HOM05D001798 ORTHO05D005040 1.5e-07 60.1 123 40.7
FvH4_3g45900 Fragaria vesca HOM05D001798 ORTHO05D005040 1.9e-07 59.7 128 38.3
FvH4_4g09360 Fragaria vesca HOM05D001798 ORTHO05D005040 1.9e-07 59.7 122 40.2
COL.COLO4_36848 Corchorus olitorius HOM05D001798 ORTHO05D005040 2.5e-07 59.3 117 40.2
Eucgr.C02285 Eucalyptus grandis HOM05D001798 ORTHO05D005040 2.5e-07 59.3 118 40.7
MD13G1257600 Malus domestica HOM05D001798 ORTHO05D005040 2.5e-07 59.3 139 40.3
QL02p097572 Quercus lobata HOM05D001798 ORTHO05D005040 2.5e-07 59.3 123 38.2
Duzib170G0014 Durio zibethinus HOM05D001798 ORTHO05D005040 3.2e-07 58.9 120 39.2
SGA_v2.0_scaffold69G23263 Striga asiatica HOM05D001798 ORTHO05D005040 3.2e-07 58.9 127 38.6
Haze_21745 Corylus avellana HOM05D001798 ORTHO05D005040 4.2e-07 58.5 115 40.9
FAN22G0641 Fragaria x ananassa HOM05D001798 ORTHO05D005040 4.2e-07 58.5 122 39.3
CSS0007301 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 5.5e-07 58.2 123 37.4
Migut.J01450 Erythranthe guttata HOM05D001798 ORTHO05D005040 5.5e-07 58.2 125 40.0
Solyc11g008600.1 Solanum lycopersicum HOM05D001798 ORTHO05D005040 5.5e-07 58.2 64 54.7
Thecc.09G171700 Theobroma cacao HOM05D001798 ORTHO05D005040 5.5e-07 58.2 130 38.5
CsaV3_1G031530 Cucumis sativus L. HOM05D001798 ORTHO05D005040 7.2e-07 57.8 116 40.5
Lj4g0012331 Lotus japonicus HOM05D001798 ORTHO05D005040 7.2e-07 57.8 123 39.0
VMungo1215G0796 Vigna mungo HOM05D001798 ORTHO05D005040 7.2e-07 57.8 127 37.8
Cpa.g.sc95.60 Carica papaya HOM05D001798 ORTHO05D005040 9.4e-07 57.4 125 38.4
Ciclev10009891m.g Citrus clementina HOM05D001798 ORTHO05D005040 9.4e-07 57.4 124 37.9
MELO3C017469.2 Cucumis melo HOM05D001798 ORTHO05D005040 9.4e-07 57.4 119 38.7
Migut.K00248 Erythranthe guttata HOM05D001798 ORTHO05D005040 9.4e-07 57.4 127 37.0
Glyma.17G064300 Glycine max HOM05D001798 ORTHO05D005040 9.4e-07 57.4 125 40.0
HanXRQChr05g0137241 Helianthus annuus HOM05D001798 ORTHO05D005040 9.4e-07 57.4 140 36.4
Phvul.003G146800 Phaseolus vulgaris HOM05D001798 ORTHO05D005040 9.4e-07 57.4 128 39.8
Ciclev10010207m.g Citrus clementina HOM05D001798 ORTHO05D005040 1.2e-06 57.0 114 42.1
Cfa013271 Carpinus fangiana HOM05D001798 ORTHO05D005040 1.6e-06 56.6 111 39.6
ClCG06G013270 Citrullus lanatus HOM05D001798 ORTHO05D005040 1.6e-06 56.6 117 40.2
FAN15G2712 Fragaria x ananassa HOM05D001798 ORTHO05D005040 1.6e-06 56.6 106 41.5
FAN27G0855 Fragaria x ananassa HOM05D001798 ORTHO05D005040 1.6e-06 56.6 119 40.3
Gorai.004G100700 Gossypium raimondii HOM05D001798 ORTHO05D005040 1.6e-06 56.6 125 37.6
Ciclev10010310m.g Citrus clementina HOM05D001798 ORTHO05D005040 2.1e-06 56.2 123 40.7
FvH4_2g36750 Fragaria vesca HOM05D001798 ORTHO05D005040 2.1e-06 56.2 118 39.0
CiPaw.08G037100 Carya illinoinensis HOM05D001798 ORTHO05D005040 2.7e-06 55.8 72 44.4
Medtr4g128470 Medicago truncatula HOM05D001798 ORTHO05D005040 2.7e-06 55.8 37 78.4
Rhsim01G0006100 Rhododendron simsii HOM05D001798 ORTHO05D005040 2.7e-06 55.8 94 40.4
Sc01g0002270 Simmondsia chinensis HOM05D001798 ORTHO05D005040 2.7e-06 55.8 126 38.9
Ah.11g043870 Amaranthus hybridus HOM05D001798 ORTHO05D005040 3.6e-06 55.5 121 36.4
MSTRG.26226 Avicennia marina HOM05D001798 ORTHO05D005040 3.6e-06 55.5 123 39.0
Gohir.A08G085900 Gossypium hirsutum HOM05D001798 ORTHO05D005040 3.6e-06 55.5 125 37.6
Lsat_1_v5_gn_7_54461 Lactuca sativa HOM05D001798 ORTHO05D005040 3.6e-06 55.5 53 58.5
RcHm_v2.0_Chr1g0336341 Rosa chinensis HOM05D001798 ORTHO05D005040 3.6e-06 55.5 117 38.5
Sabra18G0080900 Salix brachista HOM05D001798 ORTHO05D005040 3.6e-06 55.5 121 37.2
SGA_v2.0_scaffold12G06063 Striga asiatica HOM05D001798 ORTHO05D005040 3.6e-06 55.5 118 39.0
TPR.G5377 Trifolium pratense HOM05D001798 ORTHO05D005040 3.6e-06 55.5 40 72.5
Ca_21215_v3 Cicer arietinum L. HOM05D001798 ORTHO05D005040 4.7e-06 55.1 40 72.5
FAN11G1762 Fragaria x ananassa HOM05D001798 ORTHO05D005040 4.7e-06 55.1 93 43.0
FAN21G0239 Fragaria x ananassa HOM05D001798 ORTHO05D005040 6.1e-06 54.7 63 50.8
Psat4g011600 Pisum sativum HOM05D001798 ORTHO05D005040 6.1e-06 54.7 38 76.3
RcHm_v2.0_Chr6g0305001 Rosa chinensis HOM05D001798 ORTHO05D005040 6.1e-06 54.7 123 39.0
Sopen11g004390 Solanum pennellii HOM05D001798 ORTHO05D005040 6.1e-06 54.7 123 38.2
Atru.chr7.661 Acer truncatum HOM05D001798 ORTHO05D005040 8.0e-06 54.3 43 65.1
Cpa.g.sc23.17 Carica papaya HOM05D001798 ORTHO05D005040 8.0e-06 54.3 113 39.8
Hma1.2p1_1646F.1_g295510 Hydrangea macrophylla HOM05D001798 ORTHO05D005040 8.0e-06 54.3 125 39.2
Peaxi162Scf00296g00124 Petunia axillaris HOM05D001798 ORTHO05D005040 8.0e-06 54.3 136 34.6
PGSC0003DMG400016261 Solanum tuberosum HOM05D001798 ORTHO05D005040 8.0e-06 54.3 56 57.1


User provided reference genes

Program Settings