Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003668 Sechium edule HOM05D000034 ORTHO05D000001 1.3e-62 243.0 137 100.0
Sed0000135 Sechium edule HOM05D000002 ORTHO05D000001 1.4e-24 116.7 142 49.3
Sed0021821 Sechium edule HOM05D000002 ORTHO05D000001 2.3e-11 72.8 89 48.3
ClCG06G010690 Citrullus lanatus HOM05D000034 ORTHO05D000001 3.4e-10 68.9 88 42.0
Atru.chr2.1090 Acer truncatum HOM05D000034 ORTHO05D000001 5.7e-10 68.2 88 42.0
CANSAT25G3406 Cannabis sativa HOM05D024232 ORTHO05D000001 1.3e-09 67.0 89 42.7
TPR.G12295 Trifolium pratense HOM05D000002 ORTHO05D000001 2.8e-09 65.9 111 36.9
GSVIVG01016108001 Vitis vinifera HOM05D000002 ORTHO05D000001 2.8e-09 65.9 96 38.5
Lalb_Chr13g0298801 Lupinus albus HOM05D008404 ORTHO05D000001 7.0e-08 61.2 95 38.9
TPR.G32053 Trifolium pratense HOM05D000002 ORTHO05D000001 7.0e-08 61.2 82 36.6
GSVIVG01036343001 Vitis vinifera HOM05D000067 ORTHO05D000097 7.0e-08 61.2 82 35.4
Os02g0671800 Oryza sativa ssp. japonica HOM05D000002 ORTHO05D000001 1.2e-07 60.5 88 35.2
Atru.chr13.248 Acer truncatum HOM05D000002 ORTHO05D000001 2.0e-07 59.7 89 38.2
Atru.chr2.3010 Acer truncatum HOM05D000002 ORTHO05D000001 2.0e-07 59.7 89 38.2
ClCG04G000690 Citrullus lanatus HOM05D000034 ORTHO05D000001 2.7e-07 59.3 82 32.9
CANSAT25G2670 Cannabis sativa HOM05D000002 ORTHO05D000001 3.5e-07 58.9 130 34.6
Atru.chr8.2260 Acer truncatum HOM05D000002 ORTHO05D000001 4.5e-07 58.5 88 34.1
CANSAT64G1606 Cannabis sativa HOM05D000002 ORTHO05D000001 4.5e-07 58.5 97 33.0
CANSAT21G1279 Cannabis sativa HOM05D000002 ORTHO05D000001 7.7e-07 57.8 105 33.3
Lalb_Chr05g0228251 Lupinus albus HOM05D008404 ORTHO05D000001 7.7e-07 57.8 70 40.0
PSO339G5847 Papaver somniferum HOM05D000002 ORTHO05D000001 7.7e-07 57.8 131 35.1
CANSAT54G2325 Cannabis sativa HOM05D000002 ORTHO05D000001 1.0e-06 57.4 106 31.1
Psat1g047720 Pisum sativum HOM05D000002 ORTHO05D000001 1.0e-06 57.4 77 39.0
Sabra06G0056900 Salix brachista HOM05D000002 ORTHO05D000001 1.3e-06 57.0 145 29.0
ClCG02G008400 Citrullus lanatus HOM05D000034 ORTHO05D000001 1.7e-06 56.6 78 35.9
AT5G48050 Arabidopsis thaliana HOM05D002833 ORTHO05D003210 2.3e-06 56.2 78 38.5
TPR.G32556 Trifolium pratense HOM05D000002 ORTHO05D000001 2.3e-06 56.2 115 31.3
Atru.chr11.277 Acer truncatum HOM05D000002 ORTHO05D000001 3.8e-06 55.5 143 28.7
ClCG10G007770 Citrullus lanatus HOM05D000034 ORTHO05D000001 5.0e-06 55.1 99 31.3
PSO170G3169 Papaver somniferum HOM05D000002 ORTHO05D000001 5.0e-06 55.1 76 46.1
PSO832G1651 Papaver somniferum HOM05D000002 ORTHO05D000001 5.0e-06 55.1 120 34.2
Atru.chr2.3036 Acer truncatum HOM05D000002 ORTHO05D000001 8.6e-06 54.3 89 33.7
Lalb_Chr05g0226751 Lupinus albus HOM05D008404 ORTHO05D000001 8.6e-06 54.3 121 31.4


User provided reference genes

Program Settings