Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 0.0e+00 1441.0 782 100.0
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 1.5e-267 926.4 796 68.5
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 2.9e-260 902.1 792 65.8
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 5.6e-219 765.0 884 54.8
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 2.1e-88 331.3 809 35.2
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 2.1e-72 278.1 788 34.3
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 3.3e-70 270.8 778 32.4
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 1.6e-69 268.5 845 31.6
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 1.8e-68 265.0 844 32.2
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 1.7e-66 258.5 796 33.0
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 2.9e-66 257.7 823 31.8
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 3.9e-63 247.3 815 34.6
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 5.1e-63 246.9 829 31.2
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 1.7e-61 241.9 806 30.1
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 2.2e-61 241.5 821 30.2
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 6.3e-61 240.0 830 30.6
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 1.5e-59 235.3 821 30.2
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 2.6e-59 234.6 793 30.3
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 7.7e-59 233.0 822 30.4
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 5.5e-57 226.9 796 30.5
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 2.1e-56 224.9 828 30.3
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 7.9e-56 223.0 782 32.6
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 3.9e-55 220.7 442 38.9
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.1e-54 219.2 816 29.4
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 1.1e-54 219.2 819 29.9
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 3.3e-54 217.6 810 29.8
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 9.7e-54 216.1 847 28.9
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 9.7e-54 216.1 836 28.6
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 8.2e-53 213.0 973 28.6
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 1.8e-52 211.8 862 30.0
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 1.2e-51 209.1 815 29.9
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 2.6e-51 208.0 792 29.9
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 1.5e-49 202.2 842 29.2
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 1.9e-49 201.8 827 28.3
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 2.7e-48 198.0 857 29.9
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 4.7e-48 197.2 782 29.4
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 6.1e-48 196.8 830 28.3
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 1.8e-47 195.3 814 29.4
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 1.8e-47 195.3 799 28.3
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 4.4e-46 190.7 864 26.9
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 2.0e-43 181.8 816 27.6
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 7.7e-43 179.9 833 28.8
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 6.5e-42 176.8 793 28.0
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 1.9e-41 175.3 815 27.7
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 2.5e-41 174.9 853 27.7
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.2e-40 172.6 875 26.5
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 4.0e-39 167.5 790 28.9
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 7.5e-38 163.3 856 25.0
arahy.Tifrunner.gnm1.ann1.X1E7Z2 Arachis hypogaea HOM05D007489 ORTHO05D008037 6.3e-37 160.2 767 27.4
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 1.4e-36 159.1 775 28.5
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 1.8e-36 158.7 828 26.8
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 5.4e-36 157.1 810 26.4
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 5.4e-36 157.1 944 27.8
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 5.9e-35 153.7 818 26.7
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 1.7e-34 152.1 784 26.3
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 1.9e-33 148.7 767 26.2
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 5.5e-33 147.1 740 25.7
COL.COLO4_31347 Corchorus olitorius HOM05D007489 ORTHO05D008037 4.7e-32 144.1 166 48.2
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 6.8e-31 140.2 233 43.8
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 1.5e-30 139.0 845 26.3
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 1.3e-29 136.0 798 25.7
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 2.8e-29 134.8 789 26.0
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 7.7e-27 126.7 840 24.8
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 1.1e-25 122.9 220 42.7
ATR0602G208 Amborella trichopoda HOM05D007489 ORTHO05D008037 1.5e-25 122.5 735 24.9
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 5.6e-25 120.6 773 24.7
Lalb_Chr16g0384211 Lupinus albus HOM05D007489 ORTHO05D008037 2.8e-24 118.2 480 30.2
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 6.1e-24 117.1 724 26.0
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 1.4e-23 115.9 162 45.7
Hund23951 Selenicereus undatus HOM05D007489 ORTHO05D008037 2.3e-23 115.2 356 32.3
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 5.2e-23 114.0 815 24.3
VMungo0251G2273 Vigna mungo HOM05D007489 ORTHO05D008037 5.2e-23 114.0 261 35.6
PGR004G2208 Punica granatum HOM05D007489 ORTHO05D008037 2.6e-22 111.7 165 43.0
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 2.2e-21 108.6 807 24.3
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 3.7e-21 107.8 235 37.9
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 4.9e-21 107.5 93 63.4
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 8.3e-21 106.7 809 24.4
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 1.1e-20 106.3 891 24.1
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 1.4e-20 105.9 148 47.3
Zm00001eb152860 Zea mays HOM05D007489 ORTHO05D008037 1.8e-20 105.5 783 25.5
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 5.4e-20 104.0 872 22.9
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 7.0e-20 103.6 873 23.3
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 9.2e-20 103.2 148 43.9
DCAR_007972 Daucus carota HOM05D007489 ORTHO05D008037 1.6e-19 102.4 103 53.4
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 2.0e-19 102.1 885 24.0
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 4.6e-19 100.9 79 63.3
unitig_0.g132 Utricularia gibba HOM05D007489 ORTHO05D008037 2.3e-18 98.6 165 41.2
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 3.0e-18 98.2 888 24.7
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 8.6e-18 96.7 880 24.2
Cpa.g.sc7.37 Carica papaya HOM05D007489 ORTHO05D008037 1.1e-17 96.3 320 31.9
Peaxi162Scf00223g01422 Petunia axillaris HOM05D007489 ORTHO05D008037 9.5e-17 93.2 82 57.3
MBI06_g31401_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 2.1e-16 92.0 106 44.3
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 2.1e-16 92.0 570 26.7
Nitab4.5_0000376g0220 Nicotiana tabacum HOM05D007489 ORTHO05D008037 3.6e-16 91.3 743 22.6
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 6.8e-15 87.0 717 25.9
SEGI_30603 Sequoiadendron giganteum HOM05D007489 ORTHO05D008037 2.0e-14 85.5 144 37.5
MD05G1304800 Malus domestica HOM05D007489 ORTHO05D008037 3.4e-14 84.7 432 27.5
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 9.8e-14 83.2 757 24.3
Aqoxy534s001 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 9.2e-12 76.6 112 42.9
PSO782G2467 Papaver somniferum HOM05D007489 ORTHO05D008037 1.2e-11 76.3 156 38.5
AUR62031141 Chenopodium quinoa HOM05D007489 ORTHO05D008037 1.0e-10 73.2 224 29.5
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 6.6e-10 70.5 65 60.0
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 8.6e-10 70.1 64 48.4
HPP92_007965 Vanilla planifolia HOM05D007489 ORTHO05D008037 2.5e-09 68.6 138 34.8
HPP92_008016 Vanilla planifolia HOM05D007489 ORTHO05D008037 7.3e-09 67.0 753 23.4
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 9.5e-09 66.6 64 46.9
SGA_v2.0_scaffold66G22379 Striga asiatica HOM05D007489 ORTHO05D008037 9.5e-09 66.6 861 22.2
SMO340G0226 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 2.3e-07 62.0 60 48.3
Glyma.13G171600 Glycine max HOM05D007489 ORTHO05D008037 3.1e-07 61.6 144 36.8
QL05p044176 Quercus lobata HOM05D007489 ORTHO05D008037 3.1e-07 61.6 131 36.6
SMO356G0683 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 3.1e-07 61.6 60 48.3
Eucgr.D00548 Eucalyptus grandis HOM05D007489 ORTHO05D008037 4.4e-06 57.8 32 81.2
BolC1t01218H Brassica oleracea HOM05D010718 ORTHO05D008037 7.5e-06 57.0 868 21.5


User provided reference genes

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