Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003538 Sechium edule HOM05D000533 ORTHO05D001069 1.0e-44 183.0 89 100.0
Sed0022170 Sechium edule HOM05D000533 ORTHO05D001069 1.8e-41 172.2 83 98.8
MSTRG.26041 Avicennia marina HOM05D000533 ORTHO05D001069 3.9e-36 154.5 83 94.0
Oeu013777.2 Olea europaea HOM05D000533 ORTHO05D001069 3.9e-36 154.5 83 94.0
CAN.G1632.17 Capsicum annuum HOM05D000533 ORTHO05D001069 1.5e-35 152.5 83 92.8
CAN.G4.19 Capsicum annuum HOM05D000533 ORTHO05D001069 1.5e-35 152.5 83 92.8
Peaxi162Scf00197g00026 Petunia axillaris HOM05D000533 ORTHO05D001069 1.5e-35 152.5 83 92.8
Peaxi162Scf03098g00003 Petunia axillaris HOM05D000533 ORTHO05D001069 1.5e-35 152.5 83 92.8
Solyc00g500185.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.5e-35 152.5 83 92.8
Lj2A1229G104 Lonicera japonica HOM05D000533 ORTHO05D001069 4.4e-35 151.0 83 91.6
Nitab4.5_0007336g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.4e-35 151.0 83 91.6
Aqoxy4G01612 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 3.7e-34 147.9 83 90.4
Nitab4.5_0002287g0110 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.1e-33 146.4 83 88.0
Nitab4.5_0000127g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.4e-33 146.0 83 88.0
Nitab4.5_0001152g0980 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.6e-32 141.7 83 86.7
CAN.G993.11 Capsicum annuum HOM05D000533 ORTHO05D001069 5.9e-32 140.6 83 85.5
CAN.G497.41 Capsicum annuum HOM05D000533 ORTHO05D001069 3.8e-31 137.9 82 81.7
Solyc01g065810.2 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.9e-30 135.6 83 81.9
GSVIVG01004958001 Vitis vinifera HOM05D000533 ORTHO05D001069 2.1e-29 132.1 75 90.7
Nitab4.5_0001919g0100 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.7e-29 131.0 80 85.0
Nitab4.5_0002418g0130 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.7e-29 131.0 83 80.7
Peaxi162Scf00864g00009 Petunia axillaris HOM05D000533 ORTHO05D001069 6.1e-29 130.6 74 90.5
CAN.G811.5 Capsicum annuum HOM05D000533 ORTHO05D001069 1.8e-28 129.0 83 81.9
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 1.3e-26 122.9 61 98.4
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 1.3e-26 122.9 61 98.4
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 1.1e-25 119.8 64 95.3
SalBow1G6484 Salvia bowleyana HOM05D000533 ORTHO05D001069 1.1e-25 119.8 64 95.3
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 3.5e-24 114.8 61 95.1
BraSC48t46291Z Brassica rapa HOM05D000533 ORTHO05D001069 3.8e-23 111.3 70 84.3
BolC1t03435H Brassica oleracea HOM05D000533 ORTHO05D001069 1.6e-21 105.9 70 81.4
Nitab4.5_0008916g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 8.8e-20 100.1 83 63.9
A04p09580 Brassica napus HOM05D000533 ORTHO05D001069 9.8e-19 96.7 51 96.1
BolSC28t60324H Brassica oleracea HOM05D000533 ORTHO05D001069 9.8e-19 96.7 51 96.1
BolSC28t60426H Brassica oleracea HOM05D000533 ORTHO05D001069 9.8e-19 96.7 51 96.1
RhsimMtG0002000 Rhododendron simsii HOM05D000533 ORTHO05D001069 9.8e-19 96.7 51 96.1
SabraMtG0006500 Salix brachista HOM05D000533 ORTHO05D001069 9.8e-19 96.7 51 96.1
Sp3g25560 Schrenkiella parvula HOM05D000533 ORTHO05D001069 9.8e-19 96.7 51 96.1
arahy.Tifrunner.gnm1.ann1.0LI3ZC Arachis hypogaea HOM05D000533 ORTHO05D001069 3.7e-18 94.7 51 94.1
arahy.Tifrunner.gnm1.ann1.1S94M9 Arachis hypogaea HOM05D000533 ORTHO05D001069 3.7e-18 94.7 51 94.1
arahy.Tifrunner.gnm1.ann1.ELH4X7 Arachis hypogaea HOM05D000533 ORTHO05D001069 3.7e-18 94.7 51 94.1
arahy.Tifrunner.gnm1.ann1.PQN9HV Arachis hypogaea HOM05D000533 ORTHO05D001069 3.7e-18 94.7 51 94.1
arahy.Tifrunner.gnm1.ann1.VAXL0Q Arachis hypogaea HOM05D000533 ORTHO05D001069 3.7e-18 94.7 51 94.1
arahy.Tifrunner.gnm1.ann1.WRNL5Y Arachis hypogaea HOM05D000533 ORTHO05D001069 3.7e-18 94.7 51 94.1
arahy.Tifrunner.gnm1.ann1.WT8VJC Arachis hypogaea HOM05D000533 ORTHO05D001069 3.7e-18 94.7 51 94.1
Cpa.g.sc263.15 Carica papaya HOM05D000533 ORTHO05D001069 3.7e-18 94.7 51 94.1
Glyma.15G187666 Glycine max HOM05D000533 ORTHO05D001069 3.7e-18 94.7 51 94.1
Glyma.15G188000 Glycine max HOM05D000533 ORTHO05D001069 3.7e-18 94.7 51 94.1
Lalb_Chr00c24g0407281 Lupinus albus HOM05D000533 ORTHO05D001069 3.7e-18 94.7 51 94.1
Ca_17162_v3 Cicer arietinum L. HOM05D000743 ORTHO05D000580 6.3e-18 94.0 51 94.1
Ca_26708_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 6.3e-18 94.0 51 94.1
HanXRQChr04g0109061 Helianthus annuus HOM05D000533 ORTHO05D001069 6.3e-18 94.0 51 94.1
HanXRQChr14g0434361 Helianthus annuus HOM05D000533 ORTHO05D001069 6.3e-18 94.0 51 94.1
TPR.G29698 Trifolium pratense HOM05D000533 ORTHO05D001069 6.3e-18 94.0 51 94.1
unitig_87.g27982 Utricularia gibba HOM05D000533 ORTHO05D001069 6.3e-18 94.0 51 94.1
GSVIVG01006220001 Vitis vinifera HOM05D000533 ORTHO05D001069 6.3e-18 94.0 53 90.6
C01p34650 Brassica napus HOM05D000533 ORTHO05D001069 8.3e-18 93.6 51 94.1
BraSC159t45735Z Brassica rapa HOM05D000533 ORTHO05D001069 1.1e-17 93.2 46 97.8
BraSC48t46305Z Brassica rapa HOM05D000533 ORTHO05D001069 1.1e-17 93.2 46 97.8
arahy.Tifrunner.gnm1.ann1.C1VVMY Arachis hypogaea HOM05D000533 ORTHO05D001069 1.8e-17 92.4 51 92.2
Ah.10g028350 Amaranthus hybridus HOM05D000533 ORTHO05D001069 2.4e-17 92.0 51 92.2
Aqoxy3G01139 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 2.4e-17 92.0 51 92.2
AUR62043914 Chenopodium quinoa HOM05D000533 ORTHO05D001069 2.4e-17 92.0 51 92.2
Lsat_1_v5_gn_5_152661 Lactuca sativa HOM05D000533 ORTHO05D001069 2.4e-17 92.0 51 92.2
Lsat_1_v5_gn_7_25900 Lactuca sativa HOM05D000533 ORTHO05D001069 2.4e-17 92.0 51 92.2
Lsat_1_v5_gn_7_99760 Lactuca sativa HOM05D000533 ORTHO05D001069 2.4e-17 92.0 51 92.2
Nitab4.5_0000623g0030 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.4e-17 92.0 51 92.2
Sopen05g012880 Solanum pennellii HOM05D000533 ORTHO05D001069 2.4e-17 92.0 51 92.2
HanXRQChr01g0003461 Helianthus annuus HOM05D000533 ORTHO05D001069 3.1e-17 91.7 50 94.0
arahy.Tifrunner.gnm1.ann1.VVPQ8E Arachis hypogaea HOM05D000533 ORTHO05D001069 4.1e-17 91.3 51 92.2
Lsat_1_v5_gn_4_123980 Lactuca sativa HOM05D000533 ORTHO05D001069 7.0e-17 90.5 51 90.2
AUR62026824 Chenopodium quinoa HOM05D000533 ORTHO05D001069 1.2e-16 89.7 51 90.2
Thecc.08G163000 Theobroma cacao HOM05D000533 ORTHO05D001069 1.2e-16 89.7 74 67.6
Cfa023036 Carpinus fangiana HOM05D000533 ORTHO05D001069 1.6e-16 89.4 49 89.8
Lsat_1_v5_gn_5_16060 Lactuca sativa HOM05D000533 ORTHO05D001069 1.6e-16 89.4 84 57.1
Nitab4.5_0006806g0150 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.5e-16 88.2 51 88.2
Nitab4.5_0001152g0630 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.5e-16 87.8 77 66.2
SHI42239 Sapria himalayana HOM05D000533 ORTHO05D001069 1.3e-15 86.3 51 86.3
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 2.9e-15 85.1 63 69.8
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 6.6e-15 84.0 63 69.8
Lsat_1_v5_gn_4_3660 Lactuca sativa HOM05D003783 ORTHO05D001069 6.6e-15 84.0 51 84.3
Sopen05g012870 Solanum pennellii HOM05D000533 ORTHO05D001069 8.6e-15 83.6 51 86.3
FvH4_2g05080 Fragaria vesca HOM05D000533 ORTHO05D001069 1.5e-14 82.8 63 68.3
FvH4_c1g00130 Fragaria vesca HOM05D000533 ORTHO05D001069 1.5e-14 82.8 63 68.3
FAN20G0581 Fragaria x ananassa HOM05D000533 ORTHO05D001069 1.5e-14 82.8 63 68.3
SEGI_01046 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 2.5e-14 82.0 63 68.3
SEGI_08012 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 2.5e-14 82.0 63 68.3
SEGI_25166 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 2.5e-14 82.0 63 68.3
Nitab4.5_0000172g0890 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.3e-14 81.6 83 61.4
RcHm_v2.0_MTg0498261 Rosa chinensis HOM05D000533 ORTHO05D001069 3.3e-14 81.6 39 97.4
Solyc09g031577.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.6e-13 79.3 83 56.6
PGSC0003DMG400029135 Solanum tuberosum HOM05D000533 ORTHO05D001069 2.1e-13 79.0 45 88.9
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 2.8e-13 78.6 41 90.2
ClCG05G017710 Citrullus lanatus HOM05D023369 ORTHO05D025092 1.0e-12 76.6 38 97.4
CSS0002325 Camellia sinensis var. sinensis HOM05D000533 ORTHO05D001069 1.4e-12 76.3 46 84.8
SMO053G0001 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 1.4e-12 76.3 44 77.3
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 8.9e-12 73.6 39 84.6
SHI52562 Sapria himalayana HOM05D000533 ORTHO05D001069 1.5e-11 72.8 68 64.7
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 2.6e-11 72.0 39 79.5
Nitab4.5_0008293g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 9.8e-11 70.1 57 70.2
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 3.7e-10 68.2 63 57.1
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 6.3e-10 67.4 91 44.0
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 8.3e-10 67.0 39 74.4
Peaxi162Scf00197g00048 Petunia axillaris HOM05D000533 ORTHO05D001069 1.1e-09 66.6 78 55.1
Oeu014139.1 Olea europaea HOM05D000533 ORTHO05D007817 1.2e-08 63.2 53 66.0
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 2.0e-08 62.4 31 93.5
CAN.G267.14 Capsicum annuum HOM05D000533 ORTHO05D001069 1.0e-07 60.1 31 87.1
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 2.3e-07 58.9 38 63.2
COL.COLO4_01459 Corchorus olitorius HOM05D000533 ORTHO05D001069 2.9e-07 58.5 39 66.7
SHI32387 Sapria himalayana HOM05D000533 ORTHO05D001069 3.9e-07 58.2 49 61.2
CsaV3_UNG208550 Cucumis sativus L. HOM05D000533 ORTHO05D001069 1.1e-06 56.6 34 79.4
CBR_g30873 Chara braunii HOM05D004541 ORTHO05D000800 1.9e-06 55.8 40 67.5
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 2.5e-06 55.5 38 65.8
Nitab4.5_0000734g0150 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.3e-06 54.7 30 86.7
Nitab4.5_0012067g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.6e-06 54.3 34 76.5


User provided reference genes

Program Settings